Xiphophorus couchianus (Monterrey platyfish): 114158847
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Entry
114158847 CDS
T05908
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114158847
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114158847
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
Zf-C2H2_ZNF451
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
114158847
NCBI-ProteinID:
XP_027896542
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Position
15:8798584..8807622
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AA seq
785 aa
AA seq
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MCGSSQGFKASSSECTTDMLTSERSPQSIGATSVTGTQNVDMRSWSEANFEEQCTYIVKD
HPLEEESKSHGKTRAERSLPRNLALKRCYSSTEVIGVTSKELIPKGTRFGPLVGESYTSK
TLPKNADSRYFWRVFSEGQLHHILDGLNEEQSNWMRYVNPARSVEEQNLVACQIGLDIFF
YTIKPLQPDQELLVWYSSELAQRCNYPHRGQLAIKTNEQIQACEKMKGKRGHTVSEILRD
EPSKPKSICLRHQDSQVFSTSVPVFPLCSNTVYPMQSNLESPHGYRYVPLLSLAPYSAST
AKRPALSTPSPTNLHFALQHTQDAGKTELHQKSCVSKDVHSTFRESPYLLPHYSLGLLPH
SLPFYNEQLKPHLPTSSKFLPFDNYAHFLHPSGSGSKDFLLVSSNCKQDLSLMQNNEHKD
TNDLHSKKVNYLKNTSTDLRDFKYSACTNVYTDLTASIKASSPPIGINLHGKPSFAPREL
SNSPPVATAASSNYLPSTPTSATQSNAEDALDLGRQKRGGQIIGYKTLSYPLTRQNGKIR
YECNICGKIFGQLSNLKVHLRVHSGERPFKCQTCNKNFTQLAHLQKHYLVHTGEKPHECK
VCHKRFSSTSNLKTHQRLHSGERPYQCKLCPARFTQFIHLKLHKRLHTGEGTHRCPLCSS
TYLHYSSLQVHLQGFCPLSPSASRRLSPEELQRVNSEIERFDMSEAAEQLEVVATEAEID
KGNIIDLIQKIDNNILSLQDVTRGKAELSISRSAEECTAAQMHYHSPMVLPPASIKLESG
CISET
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggctttaaagcctcctcttctgaatgcaccacagacatgcta
acctcagagaggtcaccacaaagcataggagctacctctgtgacaggtacacaaaatgta
gatatgagatcatggagcgaagccaactttgaggagcagtgcacctacattgtgaaagac
catcccctggaggaagagtccaaaagccatggcaaaacaagagccgagaggtctttgccc
agaaaccttgccctgaaacgttgctacagttctacagaggtgattggagtgaccagtaag
gagttgattccaaagggtactcgttttggtcctcttgttggcgaaagctacaccagcaaa
acactgccaaaaaatgctgacagcagatacttctggagggtcttctcagaggggcaactt
caccatatcctggatggtttgaatgaggaacaaagcaactggatgcgttatgtcaaccca
gcaagatcagtagaagagcagaatctggttgcctgccagataggtttggacatcttcttt
tacacaatcaaaccacttcagccagatcaggagcttctggtgtggtacagctctgaactt
gcccagcgttgcaactaccctcatcgtggccaactagctattaagacaaatgagcagatt
caggcttgtgaaaagatgaaaggaaaacgagggcacactgtttctgagattctccgagat
gaaccttccaaacctaaatctatctgtctcagacaccaggacagtcaggtgttttcaacg
agtgtaccagtttttcccttatgttccaatactgtctacccaatgcagtccaacttggag
tcccctcatggctacagatatgttcctttgctatctttggcaccatacagtgcttctact
gccaaaaggccagcattaagcactcccagtccaactaatttgcacttcgccctgcaacac
actcaagacgctggcaaaactgaacttcaccaaaaatcttgtgtttctaaggatgttcac
tccactttcagggagagcccctatctattgcctcactactcactgggccttctcccgcat
tcgttaccattctacaatgaacaactgaaaccacacttgcccacatcctctaagtttcta
cctttcgacaactatgcacactttctacatccttcaggtagtggttccaaagacttttta
cttgtgtcatccaactgcaaacaagacctcagtcttatgcaaaacaatgagcacaaagac
accaatgacctccactccaaaaaggtaaactacctcaagaatacttcaactgacctcaga
gacttcaaatactctgcttgcaccaatgtctacacagaccttactgcatctatcaaggcc
agctccccacccattggcattaatctccatggaaaaccttcttttgcacctcgggaactc
agcaactcacctccagttgctacggctgcctcctcaaactaccttccttccacacctacc
tctgccactcagagcaatgctgaagatgcattggatcttgggaggcaaaagagaggaggc
cagatcattggctacaagaccctgtcttatccactcacaaggcaaaatggaaagattagg
tatgaatgtaacatctgtggaaagatctttgggcagctgtccaatctcaaggttcatctg
cgagtgcacagtggcgagcgtccatttaaatgtcagacctgtaacaagaacttcactcag
ctggcacacttgcaaaaacactacctggttcacacaggagagaagcctcacgagtgcaag
gtgtgccataagagatttagcagcactagcaacctgaagacccaccagagattacactct
ggtgagaggccttaccagtgcaagctctgtccagcccgatttactcaatttattcacctc
aagcttcacaagcggctgcatacaggggaggggactcaccgctgtcctctctgctccagt
acgtatcttcactacagcagcctgcaggtgcacctccaaggcttctgccctctttccccc
tcagcatcccggaggctgtcaccagaggagctacaacgggtcaattctgagatagagagg
ttcgacatgagtgaggccgcagagcagctagaagtagtggccactgaggctgagatagac
aaagggaacatcattgacctgatacaaaagatagataataatatcttaagcctccaagat
gttaccagagggaaggccgaactgagcatctctagatcagcagaggagtgtaccgctgct
cagatgcattatcacagtcccatggttttgccaccagcaagcatcaagctggagtcaggc
tgcatttcagagacttaa
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