Xiphophorus couchianus (Monterrey platyfish): 114158862
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Entry
114158862 CDS
T05908
Symbol
snw1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114158862 (snw1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114158862 (snw1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114158862 (snw1)
Spliceosome [BR:
xco03041
]
Complex B
Other components
Prp19-related factors
114158862 (snw1)
Complex C
114158862 (snw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
114158862
NCBI-ProteinID:
XP_027896554
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All DBs
Position
15:17961906..17968926
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AA seq
536 aa
AA seq
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MSLTSFLPAPTQLSQDQLEAEERLRAQKSLSTALVASRREPPPYGHRKGWVPRSLEDFGD
GGAFPEIHVAQFPLEMGRKKKTSNALAVQVDAEGKIKYDAIARQSQGKEKVIFSKYTDLL
PKEVLKDDAQELQRPDEEAVRELTEKTRSALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAQMARDQRAGIKSHGDKGGEDNEARERDIIRHD
RRKDRQHDRNISRAAPDKRSKLQRDQDRDVSELIALGKPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDETYNVYDQPFRSGRDMASNIYRPTKNVDKEAYADDFDSLMQNNRFAPDKEF
SGSDHGQRREGPVQFEEDPFGLDKFLEQAKQHGGSKRPSTSNRSKDDYHDKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttactagctttttaccagccccgactcagctgtcgcaggaccagctggaggca
gaggagaggctccgggcccaaaagtccctctccaccgcactggtggcatcccgcagagag
ccgcctccttacggacacagaaaaggctgggtgccccgctcgcttgaggattttggagat
ggaggcgctttcccagaaatccacgtggcccagtttccactggagatgggcaggaagaag
aaaacgtccaatgccctggcagtacaagtggacgcagaaggaaaaatcaaatatgacgcc
atcgcgaggcaaagccaggggaaggagaaggtgatcttcagcaaatacacggacctgctc
ccgaaggaagttcttaaagatgatgctcaggagctccagagacctgatgaggaggctgtg
agagagctgacagagaaaacccgatccgccctggagaagcaggtttctcaaaagattgct
gccgccatgcctgtaagagctgcggacaagcaggcccctgcacaatacatcagatatacg
ccgtcccagcagggagtagctttcaattctggagccaaacagagagtgatccgtatggtg
gagatgcagaaagaccccatggagcctcctcgctttaaaatcaacaagaagattcccaga
ggacctccgtcaccgccggcccccgtcatgcattctcctagcagaaaaatgacggtcaaa
gagcagcaggagtggaagattcctccgtgcatctccaactggaagaacgcaaagggctac
accatcccactagacaaacggctggctgctgatggaaggggtctgcaaacagttcacatt
aacgagaactttgccaagctggccgaggctctctatattgcagatagaaaggccagagaa
gcggtggagatgcgagcgcaggtggagaagaagatggctcaaaaggagaaggagaagaag
gaggagaagctgagggagctggctcagatggcccgagaccagagggccgggatcaagagc
cacggcgacaaaggcggtgaggacaacgaggccagggagcgtgacataatccgccacgac
aggaggaaagaccgacagcacgacaggaacatttccagggcggctcctgataagagatcg
aagctccagagagatcaggacagagacgtcagcgagctcatcgctctgggcaagcccaac
cctcgtacctccagcgaagctcagtacgaccagcgactcttcaaccagagcaagggtatg
gacagcggatttgctggcggcgaagatgagacctacaacgtgtacgaccagccgttccgc
agcggcagagacatggcctccaacatctacagacccaccaagaacgtcgacaaagaagcc
tacgcggatgacttcgactctctcatgcagaacaacagatttgctccagacaaagagttt
tccggctcggaccacgggcagaggcgtgaagggcctgtgcagtttgaagaggatcctttc
ggtctggataagtttctggagcaggccaaacagcacggcggctccaagaggccgtccacc
agcaaccgctccaaggacgactaccacgacaagaaacgcaggaaggaatga
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