Xiphophorus couchianus (Monterrey platyfish): 114158908
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Entry
114158908 CDS
T05908
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03410
Base excision repair
xco04210
Apoptosis
xco04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
114158908 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
114158908 (parp1)
04217 Necroptosis
114158908 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xco03032
]
114158908 (parp1)
03036 Chromosome and associated proteins [BR:
xco03036
]
114158908 (parp1)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114158908 (parp1)
Enzymes [BR:
xco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
114158908 (parp1)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
114158908 (parp1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
114158908 (parp1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
114158908 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
114158908
NCBI-ProteinID:
XP_027896630
LinkDB
All DBs
Position
15:complement(11251797..11267107)
Genome browser
AA seq
1015 aa
AA seq
DB search
MADNQEEKLYKAEYAKSGRASCKKCKDSIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
RAAAQSTADIAGFSDLRWEDQEKVKKAIESGGAVGIGKGSQKSAAKGEKTLNDFAVEYAK
SNRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFRPECNAA
QLKGFNALRAEDQEELKKRLPAVKSEGKRKADEVDGASKKQKKEEDEEKKKLEEQLKNQS
QLIWGIKDKLKKHCSVNDMKELLIANGQDVPSGESNVLDSLADGMAFGALESCKECKGQL
VFKGDLYYCSGDISAWTKCVFKTKTPSRKNFIVPKEFHEVPFLKKFKFKGQDRVYPKEAP
AQTLKPAKAETLASASSAPSERLLEAAPSDKPLTGMKLLAVGKLSKNKDDLKAAVEELGG
KITGTANKASLCLSSKKEVEKLGKKMEEVRDAGVRVVSENFLTDIKSSGKALQELVSLHA
ISPWGAEIKAEPQAPAATSKSGALSAKSTGRVKEEEGGSKTKKMKLTVKGGAAVDPDSGL
ENNAHVLEQNGKMYSATLGLVDIVRGTNSYYKLQLLEEDVQKRYWVFRSWGRVGTTIGGN
KLDKFHDKNSALDNFLGVYKEKTGNDWGTSNFTKYPNKFYPLEIDYGQDEEAVRRLTASA
GTKSKLDKPVQDLIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQA
VSDSVPEAQILDLSNRFYTLIPHDFGMKKPPLLNNLDYIQAKVEMLDNLLDIEVAYSLLR
GGAQDNEHDPIDINYEKLKTKIEVVDKTTQEAEIIMQYVKNTHAATHNTYTLEVQDIFKV
AREGEHQRYRPFEELHNRQLLWHGSRATNYAGIMSQGLRIAPPEAPVTGYMFGKGVYFAD
MVSKSANYCHTSQSDPVGLILLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPN
ASTTLNGVQVPLGKGVNTNIDDTSLLYNEYIVYDVAQINLKYLLKIRFNYQTSLW
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaccaggaggagaagctgtacaaggcggagtacgctaaaagcggccgcgcc
tcttgcaagaaatgcaaagatagcatcgctaaagactcgctgaggatggccatcatggtt
cagtcgcccatgtttgacgggaaggtcccccactggcaccacttctcctgcttctggctg
cgagcggcggctcagtccacggccgacatcgccggattttccgatctgcgctgggaggac
caggaaaaggtgaaaaaggccatcgagagcggcggagctgtcggaataggaaaaggtagc
cagaagagtgcagctaaaggagaaaagactctgaatgattttgcggtggaatatgccaag
tcgaaccgcagcacatgcaaaggctgcgagcagaaaatagaaaaggaccagatccgtgtg
tccaagaagacggtggacccggagaagcctcagctgggcctgatcgaccgctggtaccac
acggcgtgcttcgtgtcccgcagggaggagctggtgtttagacccgaatgcaacgccgcc
cagctgaagggattcaacgcgctgcgtgcagaagaccaggaggagctgaagaagaggcta
cctgctgttaaatctgaagggaagcgtaaagcggatgaggtggatggagcatcaaagaag
cagaagaaagaggaagatgaggagaagaagaagcttgaggagcaattgaagaatcaaagc
cagctgatttggggtattaaagacaagctgaagaaacattgctcagtcaacgacatgaag
gagctgctgattgcaaacggccaggatgttccctctggagagtccaacgtgctggacagc
ctggctgacggcatggccttcggtgctctggaatcctgtaaggagtgcaagggccagctg
gtgtttaaaggagacttgtattactgttctggcgacatttcagcctggacaaagtgtgtg
ttcaaaaccaaaactccttcacgcaaaaactttatcgtccctaaggaattccacgaagtt
ccttttctaaagaaatttaaattcaaggggcaggacagggtttaccccaaagaggctccc
gctcaaactctgaaaccagcgaaagccgaaaccctggcgagcgcttccagtgctcccagt
gagcgactgctggaagcagcaccttcagacaaacctctaactggcatgaagctgctggct
gtcggcaagttatctaaaaacaaagatgatctgaaggcagctgtggaggaacttggtggg
aaaattaccggcactgccaataaggcctctctctgtctcagctctaagaaggaggtggag
aagttgggtaagaagatggaggaagtgagagacgcaggcgtgcgagtcgtctcagagaat
ttcctcacagacatcaagtcatcgggtaaagctcttcaggagctggtgtctcttcacgcc
atctctccctggggcgcagaaattaaggctgaacctcaggctccagctgcaacctccaaa
tctggagctctgtctgctaagagcaccggcagggtaaaggaggaagaaggtggtagtaag
accaagaagatgaagctgacggtcaaaggcggagctgctgtggatccagactcaggtctt
gaaaacaatgcccatgtcctggaacagaatgggaagatgtacagtgctactttgggtctt
gtggacatcgtcagaggaacaaactcgtattataagctgcagctgctggaggaagatgta
caaaaaagatactgggttttcaggtcttggggcagagtgggcaccaccatcggaggcaac
aagttggacaaattccacgacaagaactctgcgctggataatttccttggggtttataag
gaaaagactggaaatgattggggtacctccaacttcactaaatatccaaacaagttctac
cctctggagattgactatggacaggatgaggaagctgtgagacgactgacggcctctgct
ggcactaagtctaagctggacaaaccagttcaggatctgatcaagatgatttttgatgta
gagagcatgaagaaggccatggttgagtttgagattgatctgcagaagatgccacttggc
aagctgagtaagagacaaatccagagtgcctatgctcttctgactgaagtacagcaggct
gtgtcagacagcgtacctgaggcacagatactggatctctccaatcgcttctacaccctc
attcctcatgacttcggcatgaagaaacctcctctcctcaacaacctggattacattcag
gccaaagttgagatgttggacaacctgctggacatcgaggtcgcctacagcttgctgaga
ggaggagctcaggacaatgagcacgatccaattgacatcaactatgagaaactcaaaact
aagattgaggttgttgacaagaccacgcaggaggctgagatcataatgcaatacgttaag
aacacccacgcggctacacacaacacctacaccctggaagtgcaagacatcttcaaagtt
gcacgagaaggagagcaccaacgctaccgtccattcgaggagctacacaatcgacagcta
ctgtggcacggctctcgcgccacaaactatgctggtattatgtctcagggtcttcgcatt
gcacctccagaggccccagtgactggttacatgttcggcaaaggtgtgtactttgctgac
atggtgtccaagagtgcaaactactgtcacacctctcagtcagaccctgtgggactcatt
ctgctggcagaggtcgctctaggcaacatgcatgaactgaagaaagcctctcacattaca
aaattaccaaagggaaagcacagtgttaaaggtttgggtagaaccgctcctgatccaaat
gcttctaccactttgaacggggtgcaagtgcctctgggaaaaggagtcaatactaacatt
gatgacacaagtctactgtacaacgagtacattgtatatgatgtggctcagataaacttg
aagtatctcctgaagatcaggtttaactaccagacatctctgtggtaa
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