Xiphophorus couchianus (Monterrey platyfish): 114159001
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Entry
114159001 CDS
T05908
Symbol
ptchd4
Name
(RefSeq) patched domain-containing protein 4
KO
K24682
patched domain-containing protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114159001 (ptchd4)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
Patched domain-containing proteins
114159001 (ptchd4)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
114159001
NCBI-ProteinID:
XP_027896808
UniProt:
A0A3B5KR94
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Position
15:complement(21377484..21417871)
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AA seq
921 aa
AA seq
DB search
MCFIGGDGASASRILWRMLRQVIHRGLRASFYWLGLFVSRHPVFFLTVPAVLTIIFGSTV
LSRFKPERDLEVLVAPTHSLAKIERSLANSLFSIDQSKHKLYSDLHTPGRYGRLILLARS
GGNILELADQVLQVHRQVLELRVAYKGFNYTFAHLCVLSHGDRRCLLDDIVTVFQDIQQA
VLSNSSFHKVPLSYPNTTLKDGRVSFIGHQLGGVSFSPNSRDQQVKFARAVQITYYLRSI
GPVVQDVIAERWENEFCALVTRLSTAEAPHPTDQLHIQSLTSFSLWRDFHQTGMLSKGEV
LVSLVLVLLAATISSSMRDCLRGKPFLGLLGVLTICIANVTAAGIFFISDGKFNSTLLGI
PFFAMGHGTKGVFELLAGWRRTRENLPFKERVADAFADVMVCYTMTSSLYIITFGMGASP
FTNIESVKIFCQSMCVAILVNYFYVFSFYGSCLVFAGQLEQNRYHSVFCCKIPSVEYLDR
QPTWFKTMMSDGHDLSTHHDSVPYQNHFIQHFLREHYTEWITNTYVKPFVVILYLIYASF
SFMGCLQISDGSNIVNLLASNSPSVSYAVTQQKYFSNYSPVIGFYIYEPIEYWNSTVQEH
LKTLSHGFNKISWMDNFFHYLRVVNISASTKSDFINILKGSFLRSPEYQHFTEDIIFSKN
RNTDEYDIIASRMYLVARTTEKKREEVVELLEKLRPLMLINSIKFIAFNPTFVFMDRYSS
SVISPILTSGFSVLTILILTFFLVINPLGNFWLILTVTSVELGVLGLMTLWNVGMDSISI
LCLIYTLNFAMDHCAPHLYTFVLATEHTRTQCIKLALEEHGAAILQNTSCFVIGIMPLVF
VPSNLTYTLFKCSLLTAGCTLLHCFVILPVFLTFFPPSKKRHKKKKRAKRKERERERERE
REREEIECIEVRENPDHVTNV
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtgcttcatcggaggagacggggcatctgcgagccggattctgtggaggatgctgcgg
caagtgatacacagagggctcagggcttccttctactggctcggcttgttcgtcagcagg
caccccgtcttcttcctcaccgtccccgcggtgctcaccatcatcttcggctccaccgtg
ctcagccgcttcaagcccgagcgggacctggaggtgctggtcgccccgactcacagcctg
gccaagatcgagcgcagcctcgccaacagcctgttctccatcgaccagtccaagcacaag
ctgtactcggatctgcacacgcccggcagatacggccggctcatcctgctggccaggtcc
ggcggcaacatcctggagctggccgaccaggtcctgcaggtccaccggcaggtgctggag
ctgcgcgtcgcctacaagggcttcaactacacgttcgcgcacctgtgcgtgctgagccac
ggggaccggcgctgcctcctggatgacatcgtcaccgtgttccaggacatccagcaggct
gtgctgtccaacagcagcttccacaaggtgccgctcagctaccccaacaccactctaaag
gatggacgtgtgtccttcatcggccaccagcttggaggggtatccttctcacccaacagt
cgggaccagcaggtcaagtttgcccgggccgtccagatcacatactacctccgtagcatc
ggccctgtggtgcaggacgtcatcgcagagcgctgggagaatgagttctgcgctctggtc
accagactgtccacggccgaggcgccgcacccgaccgaccagctccacatccagtcactc
acttccttcagcctttggcgggacttccaccagaccggcatgctgtccaaaggggaggtg
ctggtcagtctggttctggtgctcctggctgccaccatctccagctccatgcgggactgc
ctgagggggaagcctttcctcggcctcctgggcgtgctgaccatttgcatcgccaatgtg
acagctgcagggatcttcttcatatcggatgggaagttcaactccacactgctgggaatc
ccgttttttgccatgggtcatggaaccaaaggggtctttgaacttctggcaggctggagg
agaacaagggaaaaccttcccttcaaggagcgcgtggccgacgccttcgccgacgtgatg
gtgtgctacaccatgaccagctcgctctacatcatcaccttcggcatgggagccagccct
ttcaccaacatcgagtcggtgaaaatcttctgccagagcatgtgcgtggccatcctggtc
aactacttctacgttttctctttttacggctcctgcctggtgttcgccggacagctcgag
cagaaccgctaccacagcgttttctgttgcaagatcccctcagtggaatacttggaccgt
cagccgacatggtttaaaaccatgatgagtgacggccacgacctgtccacccaccacgac
agcgtgccgtaccaaaatcacttcatccagcacttcctgcgtgagcattacaccgagtgg
attactaacacctatgtcaagcctttcgtggtcatcctttatcttatctatgcttctttt
tcattcatgggatgtttacaaattagcgatggatcgaacatagtgaacctgctggccagt
aactcgccaagcgtttcgtacgccgtgacccagcagaagtacttcagtaactatagtcct
gtgattgggttttacatctacgagcccatcgagtactggaactccactgtgcaggagcac
ctgaagactctcagtcatggcttcaacaagatctcttggatggacaactttttccactac
ctccgggtggtgaacatcagcgcgtcgaccaagagtgacttcatcaatattctgaagggt
tctttcctgcgcagcccagagtaccagcactttacagaggacatcatcttctcgaaaaac
cgcaacacagacgagtacgacattatcgcctcgcgcatgtacttagtagcgcggaccacg
gagaagaagagagaggaggtggtggagctcttggagaagcttcgccccttgatgctgatc
aacagcatcaagttcattgccttcaatcccacgtttgttttcatggaccgctacagttcc
tccgtcatctcgcccatcctgacctcaggcttcagcgtgctcaccatcctcatcctcacg
ttcttcctggttatcaacccgttgggaaacttctggctcattctcacggttacgtccgtg
gagctgggcgtcttgggtttgatgaccctctggaacgtcggcatggacagcatctcaatc
ctgtgccttatttatactctaaacttcgctatggatcactgtgcaccacacctgtacact
tttgtgttggccactgagcacacgaggacgcagtgcatcaagttggcactggaggagcat
ggggcggccatcctgcagaacacgtcctgcttcgtgatcgggatcatgcctctagtgttt
gtgccttccaatttgacctacacgctgttcaagtgctccctgctcacggcgggctgcacc
ttgctgcactgttttgtcatcctgcccgtcttcctgactttctttccgccgtccaaaaag
aggcacaagaagaaaaagcgggcgaagcggaaagagcgggagagggaacgcgagcgggag
agggaacgggaggagatagagtgcatcgaagtcagggaaaatcctgatcacgtgacaaac
gtttga
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