Xiphophorus couchianus (Monterrey platyfish): 114159004
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Entry
114159004 CDS
T05908
Symbol
hdac2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
xco03083
Polycomb repressive complex
xco04110
Cell cycle
xco04330
Notch signaling pathway
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114159004 (hdac2)
03083 Polycomb repressive complex
114159004 (hdac2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114159004 (hdac2)
04350 TGF-beta signaling pathway
114159004 (hdac2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
114159004 (hdac2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114159004 (hdac2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114159004 (hdac2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114159004 (hdac2)
HDAC complexes
Sin3A-HDAC complex
114159004 (hdac2)
BRAF-HDAC complex
114159004 (hdac2)
REST complex
114159004 (hdac2)
SHIP complex
114159004 (hdac2)
MiDAC complex
114159004 (hdac2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114159004 (hdac2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
114159004 (hdac2)
Chromatin remodeling factors
NuRD complex
114159004 (hdac2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
114159004
NCBI-ProteinID:
XP_027896813
LinkDB
All DBs
Position
15:complement(22504969..22514332)
Genome browser
AA seq
489 aa
AA seq
DB search
MAYTTAGGTKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEVYRPHK
ATADEMTKYHSDDYIKFLRSIRPDNMSEFSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSA
AGSVKLNRQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIH
HGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYG
QIFKPVMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIRGHAKCVEYIKSFNLPLLML
GGGGYTIRNVARCWTYETAVALDTDIPDELPYNDYFEYFGPDFKLHISPSNMTNQNTMEY
MDKIKQRLFENLRMLPHAPGVQMQAIPEDAVPEDTVDEDTEDPDKRLSIRATDKRIACDE
EFSDSEDEGQGGRRNTANHKKSAKRPKVDEEKEREEKKADVKEEDKTKDSGSEKAESKGT
VKTEQTSST
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcttacaccacagcaggtgggaccaagaagaaggtctgctactactacgacggtgac
ataggaaattattactatggacaaggtcatcccatgaagccgcaccgcatccggatgacc
cacaaccttcttctgaactacgggctgtacagaaagatggaggtctatcgaccacacaaa
gccactgcagacgagatgaccaagtaccacagtgacgactacatcaagttcctcagatcc
atccggccggacaacatgtctgagttcagcaagcagatgcagcgattcaacgttggggag
gactgccctgtgtttgacggcttgtttgagttctgccagctgtctgcagggggctctgct
gctggctcggtgaagttgaaccggcagcagacggacattgcagtgaactgggccggagga
ctgcaccacgccaagaagtctgaagcttcaggcttctgctacgtcaatgacattgtgttg
gccatcttggagctgctcaagtaccaccagagggtgctctatattgatattgacatccat
catggcgatggagtagaggaggcattctacaccacagacagagtcatgaccgtgtccttt
cataaatacggggagtacttccctggaaccggagacctcagggacatcggagctggaaaa
ggcaaatattacgctgtcaacttcccactgagggacggcatcgacgacgagtcctacggg
caaatcttcaaacctgtgatggccaaggtgatggagatgtaccagcccagcgccgtggtg
ctccagtgtggcgccgactctctgtctggagaccgcctcggctgcttcaacctcaccatc
cgaggtcacgccaagtgtgtggagtacattaagtcgtttaacctcccactgctgatgttg
ggtggaggaggatacacgatccggaatgtggctcgctgctggacctatgagacggccgtc
gctctggatacagacatccctgatgaacttccatacaatgactattttgagtactttgga
cctgacttcaagctgcacatcagcccctccaacatgacaaaccagaacacaatggagtac
atggacaagatcaaacagcggctgtttgagaacctgcggatgctgcctcacgcccctggg
gtccagatgcaggccatcccagaggacgctgtcccagaggacacggtggacgaggacact
gaggaccctgacaaacgcttgtccattcgtgccacagataagaggatagcctgtgatgaa
gagttctctgactctgaggatgaggggcagggcggcaggaggaacacagccaatcacaag
aagagtgccaaaagaccaaaagtggacgaggagaaggagagagaggagaagaaagcagat
gtgaaagaagaggataagacaaaagacagcggctcagaaaaggctgaatccaaaggaacg
gtgaagaccgagcagaccagcagcacctga
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