Xiphophorus couchianus (Monterrey platyfish): 114159632
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Entry
114159632 CDS
T05908
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114159632
04020 Calcium signaling pathway
114159632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114159632
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114159632
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
114159632
NCBI-ProteinID:
XP_027897437
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All DBs
Position
16:15222195..15313387
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AA seq
2497 aa
AA seq
DB search
MARFGDEMPGRYGGGPGGGGGPGGRGGSRQGGPHGHGHGHGHGHGHGPPGGPGAQRMYKQ
SMAQRARTMALYNPIPVRQNCFTVNRSLFIFSEDNFVRKYAKKITEWPPFEWMILATIIA
NCIVLALEQHLPDGDKTPLSERLDDTEPYFIGIFCFESGIKILALGFAFHKNSYLRNGWN
VMDFVVVLTGILSTVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIG
LLLFFAILMFAIIGLEFYIGKFHKTCFDNHTGEIREEFPCGEEPPSRECPNGTVCRGGWL
GPNFGITQFDNILFAILTVFQCITMEGWTDLLYYSNDASGSAWNWMYFIPLIIIGSFFML
NLVLGVLSGEFAKERERVENRREFLKLRRQQQIERELNGYLEWICKAEEVILADDENEND
YDGSRRRATKNHKNKAELLNPEEGEGDLALGSPFARASLKSSKLEGSTFKRRERRFRFFV
RRVVKSQAFYWTVLCLVGLNTLCVAVVHYDQPERLSDFLFYAEFIFLGIFLTEMCVKMYG
LGKQAYLNSSFNCFDCIVICGSIFEVLWSIIQPGTSFGISVLRALRLLRIFKVTKYWASL
RNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFENGTPPTNFDTFPAAIMT
VFQILTGEDWNVVMYDGIQSQGGVQKGMAFSVFFIVLTLFGNYTLLNVFLAIAVDNLANA
QELTKDEQEEEEAASQKIALQKAKEVAEVSPLSAANLSIAANKVHSECHNASDPFLDCKE
QQKNHKGINKSVWEQRTKELRKQTLASSREALYNELDPDDHWKARTGREEHNNVNFARHV
RPDMKTHLDRPLVVDPCENRNNNTNKTTANNSDLCITQHHSSDELHKQTQLQDQHGQVGV
GGGGGSGQPRALLDRGESTESRRSRKGELHHKSHVRLDATVIPGPGSEERPPRRHHHNRS
GSRGGGQSEHRRTRSHRKTAEDGEEGGGGAGKSGRHKSKGMNRPGAGGDHQGASEGGERR
PKRSRHGNQSEGEGRRMCQHRRRDCSVPNLSTTRPIQKSLSRQNSQYSEDMDNLMNTKLV
SGSSPPGQSHSNPVANYALAPGFGSALHLANSGTHGSLVTLDSYGNIGHHRAHSVIRLPH
PDYTAVDMPIFPSINAILQVNKNANTEPLPAKEDKDDDDDKGGEGGPRPMPPYSSMFILS
TTNPFRRACHYICTLRYFEMCILLVIAMSSIALAAEDPVWPESPRNNVLRYFDYVFTGVF
TFEMLIKMVDLGLVLHQGSYFRDLWNILDFIVVSGALVAFAFTGGGGGSSKGKDISTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYLLFMFIFAVVAVQLFKGRFF
YCTDESKEFERDCRGEYLVYERDNEVRAQKREWKKYDFHYDNVAWALLTLFTVSTGEGWP
QVLKHSVDATYENQGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMME
EYSLEKNERACIDFAINARPLTRHMPQNKLSFQYKMWEFVVSPPFEYTIMAMIALNTVVL
MMKYDGASVTYEAVLANLNIVFTSLFSLECVLKIIAFGALNYFKDAWNIFDCVTVLGSIT
DILVTELGMDNFINLSFLRLFRAARLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAML
FFIYAIIGMQLFGNIAIEEDGESAINQHNNFRTFVQALMLLFRSATGEAWHEIMLACLGG
KECDINSGNTGPECGSQVAYLYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHH
LDEYVRIWAEYDPAACGRIHYKDMYSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVGDD
NSVHFNSTLMALIRTALDIKIAKGGIDKHQMDAELRKEMMAIWPNLSQKTLDLLVTPHKA
ATDLTVGKIYAAMMIMEYYRQSKIKRSQALRDEQNRTPLLFQRVEPPTPSQDGGPGLNNA
LPPPETTDTGNSLPVEGGIPESQSWVTARAKEMSQKVGSWSPEGHSEDGLGSMTNSQTVE
MREMGQDGISDTEQFPPMEGHGRAASMPRLPGDNQTISDNSPMKRSASSLGHSRSGRGHR
DKGDDFHMECSIPEEGRASRHGHRRKDRSHRASERSLCRYSEIDTDLSTTTQSGDLTSKE
KDRDRDRGRSKDRKHHHHHHHHHGSVDKERYVPERSGEYGHRHREHDRERDRDGERRWSR
SPSEGRENVTHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPATPRPHVTYSPVVRKSM
PTPPGGPQGRPPAPGPRHFSPEPLQGQGPPPAGVPMAHHGTPRQSHHPPLRWGDSGGGGG
SMEGEGCFYNQEYQDYDPHHEPPAYEPSAMQSGNPHPHTNHPLPPPTQPQPHNPHPLPPS
QPHPVNNPHPQPTRTSPRTVSHAIPPTTALTGPVQNQVQPAAQRRLPNGYRSSSPSTHLH
GPPHTGPHKVPPPAGHPRGPRKGLHEPYGDREEDDWC
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcggagacgagatgccgggcaggtatggagggggccccggtggtggaggg
ggccccgggggccgcggcggcagcaggcaaggcggaccacacggacatggccacggtcat
gggcacggccacggccatggaccaccaggaggaccgggagcccagagaatgtataagcag
tctatggcgcagagagcccgcacaatggccctctataaccctatcccggtacgccagaac
tgcttcactgtcaatcgctcgctgtttattttcagcgaggataacttcgtgagaaaatac
gccaaaaagatcaccgaatggcctccatttgagtggatgattctagctaccatcattgcc
aattgcattgtcctagctcttgaacaacatttgcctgatggggacaagacaccactgtct
gaacggctggacgatacagaaccgtactttataggaatcttctgctttgagtccggaata
aagatcctggcgcttggttttgccttccacaagaactcctacctgagaaatggatggaat
gtcatggactttgtggtggtgctaacagggattctgtccactgtgggctcagatttcgac
ttgcggacccttcgggctgtgagggtattgaggcctctcaagctggtgtctggtatacct
agcttacaggtagtgctcaaatccatcatgaaggccatgatccccctactacaaattggc
ctgttgcttttctttgccatcctcatgtttgccatcattggtctggagttctacataggc
aaattccacaaaacctgctttgacaaccacacaggtgagatccgggaagagttcccatgt
ggagaagaacctccatcccgggagtgtccaaatggcaccgtttgtagagggggctggttg
gggccaaactttggcattacccagtttgacaacatcctgtttgctattctcaccgtcttc
cagtgcatcaccatggagggctggacagaccttctctactatagcaacgacgcctcaggg
agcgcatggaactggatgtatttcatcccgcttatcatcatcggctccttcttcatgctc
aacctggtgcttggtgtgttgtcaggggagtttgccaaagaaagggagcgtgtggagaac
aggagagagttcctgaagcttagacgacagcagcagattgaaagggaactcaatggatac
ctggagtggatctgcaaggccgaagaggtcatcttggcagatgatgagaatgaaaatgat
tatgacggttctcgtagaagagctacaaaaaaccataagaacaaagcggagctcctcaat
ccagaggaaggagagggagatctggcattgggttcaccatttgctcgtgccagtctgaaa
agctcaaaactcgaaggttcaactttcaagcggcgggagcggcggtttcggttctttgta
cgacgcgtcgtcaagtcccaggcattttactggaccgtgttgtgtttggtgggcctcaac
acactgtgtgtggctgtagtgcactacgaccagcccgaacgactttcagattttctattt
tatgctgagttcatcttcctggggattttcctgactgagatgtgtgttaaaatgtacggc
ctcggaaaacaggcctacctcaactcctccttcaactgtttcgactgcattgtgatttgt
ggcagcatatttgaagtgttgtggtcaatcatccaaccgggcacatcgtttggcatcagt
gtgctacgggctctcaggttattaagaatcttcaaagtcaccaagtactgggcatcgttg
cgtaaccttgtcgtctctcttctcaattccatgaagtccatcattagcttgctcttcctg
ctcttcctcttcatagttgtctttgcccttctgggcatgcagctcttcggaggacagttt
aattttgaaaatggcacccctccgaccaatttcgataccttccctgcagcaataatgacg
gtgtttcagatcctcactggtgaggactggaacgtggtgatgtatgatggcattcagtct
cagggtggagttcaaaaagggatggccttctctgtcttctttattgttctcactcttttt
ggcaactacacattgctaaatgtgttcttggccatcgctgtggacaatttagccaatgct
caagaactgaccaaggatgagcaggaagaagaggaagctgccagtcagaagattgccctg
cagaaagcaaaggaggtggctgaagtcagcccattgtcagccgccaacctctccattgca
gccaacaaagtacacagtgagtgtcacaacgcatccgacccctttctggactgtaaggaa
cagcagaagaaccacaaaggtatcaataaatcagtgtgggaacagcgaaccaaagagctg
aggaagcagacgctggcatccagtcgtgaggccctctataatgagctggaccctgatgat
cactggaaggcaaggacagggagggaagaacacaacaatgtcaacttcgcccgtcacgtc
cgccccgacatgaaaactcacctggatcgaccgttagtcgttgatccctgtgagaaccga
aacaacaacaccaacaagaccactgccaacaattcggacctctgtattacccagcaccat
tcttccgatgagctccacaaacaaacgcagctgcaagaccaacatggtcaagtaggagta
ggaggtggaggcggttcaggccaacccagggctctcctggatcgaggggagtccactgag
agtaggcggagtcgcaaaggtgagcttcaccacaaatctcacgtccggttggacgctaca
gtcattccaggtccaggctcagaagagaggccacccagacgccatcaccacaaccggagt
ggcagtcgagggggaggacagtcagagcacaggaggacaaggtcacatcgaaaaactgca
gaggatggagaggagggtggaggaggagctggaaaatcagggaggcataagagtaagggg
atgaacagacctggagctggaggagaccatcagggagccagtgaaggtggtgagaggagg
ccaaaaagaagtcgacatggcaatcaatcagagggagaggggaggaggatgtgccagcac
agaaggagggattgcagtgtcccaaacctttctaccactcgacccatccaaaagagcctc
tccaggcagaatagccagtacagtgaagatatggacaacctaatgaacaccaaactggtc
tctggctcttctccacctggccaaagtcattctaatccagttgccaattacgcattagcc
cctggcttcggatctgctctccatcttgctaacagtggcactcatggaagtttagttaca
ttggatagctacggcaacatcggccatcatcgagcgcacagtgtgatcaggctgcctcac
cctgactacacagcagtggacatgccaattttcccgtctattaacgctattctccaagtc
aataaaaatgcgaacactgagcctctaccggcaaaggaggacaaggatgacgatgatgat
aaaggaggtgaaggagggcccagacccatgcctccatacagttccatgttcatcttgtcc
actactaacccctttcggcgggcatgccactacatttgtactctacgctactttgagatg
tgtatcctgttggtcattgctatgagcagtatcgctttggctgctgaagatcctgtctgg
cctgaatcacctcgaaacaatgtacttcgctatttcgactatgtttttactggagttttc
acatttgagatgctgataaagatggtggatctgggcttggtcttgcaccagggctcttat
tttcgggacttgtggaacatccttgactttatagtggttagtggtgctctggtggccttt
gccttcaccggcggcggcgggggtagcagtaaaggaaaagacatcagcactatcaaatct
ttgagggttctgcgagttttgcgtcctctgaagaccattaaacggcttccaaagctcaag
gctgtgtttgactgtgtggtgaactcactaaagaacgtcctgaacatcctgattgtctac
ctactcttcatgttcatctttgctgtggtagctgtgcagctcttcaagggacgtttcttt
tactgcactgatgaatccaaagagtttgagcgcgactgcagaggcgaatatctggtgtat
gaacgtgataacgaagtgagggcgcagaagcgggagtggaagaaatacgatttccactat
gacaatgtggcttgggcccttctcaccctcttcaccgtttccactggagaggggtggccg
caggtgctgaaacattcagtggatgcgacctatgagaatcagggcccgagcccagggtat
cggatggaaatgtccatcttttacgtggtgtacttcgtggtcttccccttcttctttgtc
aacattttcgttgctctcattatcatcaccttccaagaacaaggagacaaaatgatggaa
gaatatagtctggaaaagaatgagagagcatgtatagattttgccatcaacgccaggcct
ctgacacgccacatgcctcagaataaattgagctttcagtacaaaatgtgggagtttgtg
gtgtcaccgccatttgaatataccattatggctatgatcgcgctcaacaccgtggtgcta
atgatgaagtatgatggagcttctgtcacctacgaagcagttttagccaacctcaacata
gtgtttacttccctcttctccttggagtgtgtccttaagatcattgcctttggggctctg
aactatttcaaagatgcctggaatatttttgactgtgtgacagttctgggcagcattaca
gacatcctggtcacagagcttgggatggataatttcatcaacttaagtttcctaaggctg
ttcagagcagctcgtctcatcaagctgctgaggcagggagaaaccattcgcatcctgctc
tggacctttgttcagtcgttcaaggcactcccttatgtctgccttctcattgctatgctg
tttttcatctacgccataatcgggatgcagctatttgggaatattgctattgaagaagat
ggagagagtgccatcaaccaacacaacaacttcaggacctttgtgcaggctttgatgctt
ctctttaggagcgcaacgggagaggcgtggcatgagattatgctggcttgtctggggggt
aaggagtgcgacatcaattcaggaaacacagggccggagtgtgggagccaagtggcctac
ctctactttgtctccttcatcttcttctgctcgttcttgatgctgaatctgtttgtagcc
gtcatcatggacaactttgagtacctgacaagagattcatctattctgggacctcaccat
cttgatgagtatgtaaggatatgggctgagtatgatcctgctgcctgcgggcgcatacat
tataaggacatgtacagtttattacgagttatcgacccgcctcttggcttaggaaagaaa
tgcccccatagggtggcctgcaagagactacttcgtatggatctacctgtgggtgacgac
aactcggtccacttcaactccacactcatggctttgatccgcacagctctggatatcaag
attgcgaagggtggcattgacaagcatcagatggacgcggagctgaggaaagagatgatg
gcgatatggcccaacctctcccagaaaaccttggatttgctggtcacaccacacaaggca
gctacagacttgacggttgggaaaatctacgcggccatgatgatcatggagtactatcgc
cagagcaagatcaaacgatcccaggcacttcgtgatgaacagaaccgaacgccattactg
tttcagcgcgtggagccaccaaccccctcccaggatgggggtccaggactcaacaacgcc
ttgcctccgcctgagacaacagatactggcaacagcttgccggtggagggcgggatccca
gagagccagtcatgggtgacggctcgtgccaaggagatgtcccagaaggttggcagctgg
agccctgaagggcactctgaggatggcctaggaagcatgaccaactcacagacggtagag
atgagagagatggggcaggatggtatctcggatactgagcaatttccgccaatggaaggc
cacggcagggccgcttccatgccccgcctcccaggcgacaaccaaaccatcagtgacaac
agtccaatgaagcggtccgcctcgtctctgggccacagcaggtctgggcgaggacacaga
gacaaaggagatgatttccacatggagtgttcaatacccgaggaggggagagcttccaga
cacggacaccggcgaaaggatcgcagtcatcgagcgtctgagaggtccctctgtcgctac
agtgaaattgacacagacctgagcacgaccacacagtctggtgacctcacatcgaaagag
aaggaccgcgaccgagaccggggtcgatccaaagaccgtaagcaccaccaccatcatcac
caccaccacggctccgtggacaaggaacgctacgtgcccgaacgcagtggcgaatatgga
cacagacacagggagcatgaccgggagagggatagagacggggaacggcgctggtcgcga
tcacccagcgagggccgtgagaacgttacgcacagacagggcagtagttcagtcagcgga
agtccagttccatcgacctcgggaaccagtacaccacggagaggtcgccgacagttgcct
cagacccctgccactccccgaccccatgtcacgtactcccctgtagtccgtaagtccatg
cccactcctcctgggggaccgcagggcagacccccagccccaggtccccgccacttttct
ccagagcctcttcaagggcagggtccacccccagctggagtcccaatggcccaccatggc
acaccccgccagagtcatcatcccccactacgctggggtgactcaggtggaggaggcggt
tccatggaaggggaaggctgcttctacaatcaggagtaccaagactatgatccgcaccat
gaaccacccgcctacgagccaagtgccatgcagagtggaaaccctcacccccacactaac
caccctctgcctcctcccacacaaccacagcctcacaacccccacccccttcctccttca
cagcctcatccggtgaacaacccccacccgcagcccactcgcacctcacccagaactgtc
agccacgcgattcctcccaccactgccctgactgggcctgtgcagaaccaggttcagcct
gctgcccagcgccgcctaccaaatggctaccgatcgtcatccccttccacacacctccat
ggacctccacacactgggcctcacaaggttcctcctccggctgggcatccgaggggtccc
cgcaagggactgcacgaaccctatggtgacagggaggaagacgattggtgctag
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