Xiphophorus couchianus (Monterrey platyfish): 114159720
Help
Entry
114159720 CDS
T05908
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114159720 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114159720 (nup85)
03036 Chromosome and associated proteins [BR:
xco03036
]
114159720 (nup85)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114159720 (nup85)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114159720 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
114159720
NCBI-ProteinID:
XP_027897603
LinkDB
All DBs
Position
16:complement(14209281..14215991)
Genome browser
AA seq
654 aa
AA seq
DB search
MEEVDVEPTVTNIPEIRHGKHMGFAWGPGDILVYETHFKPSGYTLSGPGGSFIHKVRKDE
DINSPILRKLFNESHHIFVGLQTINDDLPSKSKRPQFISISRNYRSVIRACMEELQQVAV
STRDTEKGTQYGNQVSILLAIELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKADVDEKA
KDVLQSDSPAEHHNYWDVVVSYVLQGRLEEARQMLVKQATLQPASRNMYKLMDSLLSKMP
FYNPGGTQTLTEFDVKWRNWHEEVDRYLKDNTFASNRHLELICKILVGDEDTLLEQKELL
STWYHFLVTRLLYSHPTVKPTDLHYYAQSCLTMFLDSRSVQEPLDSILLAAFEFDIYLVI
KDCSIVLNNWWFVAHLTDLLDHCKLLQSHNLNFGSNMREFLLLEYASGLFTHHSLWQCAV
DYFDHCPELGRACLELQIERVPLDTERKALKVLRICEERQMSEQVRSICKIMAMRALRNN
RLGSALSWSIRAKDAAFATLISERFLQDYCAKGTFSDLDLIDNLGPAMLLSDRLTFLGKY
REFHKLYGEKRFKEAAKLLLSLMTAKIAPQSFWMTLLTDALPLLEQKEVIFSADQTYELM
YCLEELTSSLDTAASGGERPMQEEDVEQTKVELLRLSLARNLAMAIIKEGTVET
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagtagacgtcgagccgacggtcactaacataccagaaatcagacatgggaag
catatgggatttgcctggggtcctggagatatccttgtttatgaaacacattttaaaccg
tcaggttatacactgtcaggcccaggtggctccttcatccacaaagtcaggaaagatgag
gacataaattctcctattttacgcaaactgtttaatgagtcgcatcacatcttcgttgga
ttgcagacaatcaacgatgacctccccagcaagagcaaaagaccccaattcatcagcatc
agtagaaactacagatctgtgattcgggcgtgtatggaggagcttcagcaagttgcagtt
tctacaagagatacagaaaaaggcacacaatatggaaatcaggtttctattcttttggcc
attgaactgatctggaatctgtgtgaagtgctttttatcgacgctgctcctgctggctct
ctcttgcttcatcttttggactgggtgaggttacacaaggctgatgttgacgagaaggcc
aaggatgtgctgcagagcgacagtcctgcagagcaccacaactactgggatgtggtggtg
agttatgttctgcagggcaggttggaagaagccaggcagatgctggtgaagcaggccaca
ctacagccagcctctaggaacatgtacaagctgatggatagcttactcagcaaaatgcct
ttttacaaccctggcggcacgcagacactaacagagtttgatgtgaagtggaggaactgg
catgaggaggtggatcgctacctcaaggacaatacgtttgccagcaaccgccacctggag
ctcatctgtaagatcctggtgggtgatgaagacactctgttggagcagaaggagctgctc
agcacctggtatcactttcttgtgactcggctgctctacagtcaccccacagtgaaacca
actgacttgcattactatgcacagtcgtgcctgacgatgttcctggactcgaggagcgtc
caggagcctctagacagcatcctactggccgcctttgagtttgacatttatctggtcatc
aaggactgcagcattgttctcaacaactggtggtttgtggctcatttgacagacctgctg
gatcattgcaaactcctccagtctcataatctaaactttgggtccaatatgagggagttc
ctcctgttagagtatgcctcaggtttattcactcatcacagtctttggcagtgcgctgtg
gattactttgaccactgtccggagttggggcgagcttgcctcgagctgcagatcgagcgc
gtgcctttagacacggaacggaaagcactcaaagtgctccgaatttgtgaggagaggcag
atgtcagagcaagtgcggagtatctgtaagatcatggctatgagagctctaaggaacaac
agactgggctccgctctgtcctggagcatcagggccaaagatgccgcctttgccaccctc
atttctgagaggttcctacaggattactgtgccaaagggactttttctgatttggatctg
attgataatttgggtccagcaatgctactcagcgacaggctcacattcctcgggaagtac
agggagttccacaaactgtacggggagaaacgcttcaaggaggctgcaaagctgctgctc
tcgctcatgacggcgaagattgctccccaaagcttctggatgactctgctgaccgacgct
ctgccgctgctggagcagaaggaggtgatcttctctgctgaccaaacctacgagttgatg
tactgtttagaggaactgacctcctcactagacaccgcagcttctggtggagagagacca
atgcaggaggaagatgtggagcagaccaaagtggagcttctgagactctctctggccagg
aatctggccatggctatcatcaaagaaggaaccgtggagacatga
DBGET
integrated database retrieval system
