Xiphophorus couchianus (Monterrey platyfish): 114159731
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Entry
114159731 CDS
T05908
Name
(RefSeq) MHC class II regulatory factor RFX1-like isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114159731
Transcription factors [BR:
xco03000
]
Eukaryotic type
Other basic domains
RF-X
114159731
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
114159731
NCBI-ProteinID:
XP_027897621
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Position
16:complement(14526781..14540440)
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AA seq
964 aa
AA seq
DB search
MATSAYVGEMQPAAQPQGAAVTVTPGQPDTASTPATTPQFLAEIQTAVATPTVVTPTGQT
TPTEQVSVVASQKPAVGSQTQTASQVQPAQTQYVTAEIQGSPTQSGNAQNTPQYIVVTVT
EGSLHSSDSVSDSSPPPAVVQTGVPTQVVQQVQAAQQRSVVQATSQIAKTEPGTQLSVTN
LQPVHITQELPVSMEAVELGRDRTVDELPLHHLTADPESLAWVPKVHNDNSGLWTVFYQV
QQQLASVPVQHVYANQVQYVEGGDTNYTTSTIRSSNFPYTETPLYTQSTAAQYYEGQPTS
GAQASSPGTSLTVAVTAGATGGVSMFVAQPTSAAGAGATVVTAGGTANGSEEGAGTNGSA
AGSYVIQGGYMLGSGSNSSSSSSNGGAAGNSQNYSHSARASPATVSITEGEESSVPSADK
KVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLG
TRGNSKYHYYGLRIKAGSSLLRLMEDQQHLAMRQQPFSQKQRLKPVHKVEGMTNGTAAGA
GQQQQQQQGAGHVDISTQVQQYQQFLDASRSLPEFPDIDLHGKSFPEGIELDHIKSFQLL
YREHCEAILDVMVNLQFTLVETLWKTFWRFSQSQAGDTPMAVHDESEKRLPKSCLVLLCK
YEPVLRWSRDCDNSLYQSLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTNAMMNIPEE
MVRIKVTSANAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASW
VCRCEDRVVQRLEQDFKLTLQQQNSLEQWAVWLDGVVSQVLKPYQHSPAFPKAAKLFLLK
WSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFASL
GRGLNQLDPDKEEEEEEDDESEEEGQELTLPSDAAVLGEESLEPPAKLARTDQRVLFTTG
SADN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggccacctcagcctatgtaggggagatgcaaccagcagcccagcctcagggggctgct
gtgaccgtcacaccgggtcaacctgacactgcctccacccctgcaactacacctcagttt
ctggcagagattcaaactgctgtggctacccccactgttgtcacacctacaggccaaact
actcccactgagcaggtttccgtggttgcctctcagaagcctgcagtcgggagtcaaacc
cagaccgcatcacaggtgcagccggctcaaacgcagtacgtgacagcagagatccagggt
tcccccacgcagtctggcaatgctcaaaacactcctcagtacattgttgtcacagtcaca
gagggttctcttcactcaagtgacagtgtgtcagattctagccctcctccagctgttgtg
cagacaggagttcccacacaggttgttcagcaggtacaggcagcccagcagaggtcggtg
gtgcaggccacttctcagatagccaaaactgagccaggcacacaactcagtgtcaccaat
ctacagcctgttcatatcacacaggaacttcccgtttcaatggaggccgtcgagttaggc
agagataggacagtagacgagttgccgcttcatcatctgacagcagatcctgaatctttg
gcctgggtgccaaaagtccacaatgacaacagtgggctctggactgttttttatcaagtc
cagcagcagcttgcttcagtgccggtgcagcatgtgtacgccaaccaagtgcagtatgtg
gaaggaggagacaccaactacaccaccagcaccatccgctccagcaacttcccttacact
gaaacgccgctgtacacccagagcacagctgcccagtattacgaaggtcagccgacttca
ggcgcacaggcctcctcccccggcacgagtttgacagtcgccgtgactgccggcgccacg
gggggcgtgtccatgtttgtggcccagcccactagtgcagcaggggccggcgccactgta
gtgaccgccgggggcactgccaacgggtcagaggaaggggcgggcaccaatggtagcgca
gcaggcagttacgtgatccagggtggttacatgctgggcagtggcagcaacagcagcagc
agcagcagcaacggaggggccgccgggaacagtcagaactactcacacagcgcccgcgcc
tccccagccactgtgagtattacagagggcgaggagagtagcgtgccgtcggcagacaag
aaggtacagtggttgctggacaactatgagacggctgaaggagtaagtctgccacgttcc
acgctgtactgccactacctgctgcactgccaggaacagaagcttgaaccagtcaatgct
gcttcctttgggaaactcatccgatccgtgttcatggggctacgcacgcgacgcctgggc
actcggggcaattctaaataccactattacggactgagaatcaaggccggctcatctctt
ctccgactgatggaagaccaacaacatttggccatgaggcaacagccgttctctcagaaa
caaaggttgaagcctgtgcataaagttgaaggtatgaccaatgggaccgcagcaggagca
ggccagcagcaacagcagcaacagggagcaggacatgtggacatcagtacccaggttcag
cagtaccagcagttcctggatgcttctcgatctctcccggagtttccagacatcgacctc
cacgggaagtctttcccagagggaattgaactcgaccacataaagagctttcagctgctt
tacagagaacactgtgaggccatactggacgtgatggtcaatctgcagtttacactggta
gagactctatggaaaaccttctggaggttcagccaaagccaagctggagatactccaatg
gctgtgcacgatgagtcagagaagcgcctcccaaaatcctgcctggtgttgctgtgcaag
tacgagccggtgctgcgctggagccgcgactgtgacaacagcctgtaccagagcctggtg
gagatcctcatccccgacgtcctcagacccatccccagtgccttaacacaagccattcgt
aactttgccaagagccttgagagctggctgaccaacgccatgatgaacatccctgaggaa
atggtccgcatcaaggtgacatcagccaatgcttttgcccagacgctgcgccgctacacc
agtctgaaccatcttgctcaggcagcccgcgctgtcctccagaacacagctcagatcaac
cagatgctctccgatctcaaccgagtcgactttgcgaacgttcaggagcaagcttcatgg
gtgtgcagatgcgaagaccgtgtggtgcagcggctggagcaggacttcaagctgaccctg
cagcagcagaactccttggagcagtgggccgtgtggcttgatggtgtggtctcccaggtc
ctgaagccataccagcacagccctgcctttccaaaggctgccaagctcttcttgctcaag
tggtcgttttacagttccatggtgatcagggacctcaccctacgaagtgcagccagtttt
ggttcctttcacttgatccgcctgctatatgacgagtacatgtactaccttatcgagcac
agagtggcccaggctaagggagaaacccccatcgccgtgatgggagagtttgccagttta
ggtcgcggtctgaaccagctggatcctgacaaagaagaggaagaggaagaagatgatgag
agtgaggaagagggccaggagctgaccctcccctccgatgcggcggtgcttggagaggag
tctctggagcctccagccaagctagccagaacggaccagcgcgtcctcttcaccacgggc
tcggctgacaactaa
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