KEGG   Xiphophorus couchianus (Monterrey platyfish): 114159732
Entry
114159732         CDS       T05908                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    114159732 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114159732 (wdr61)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     114159732 (wdr61)
SSDB
Motif
Pfam: WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_EIPR1 eIF2A Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_NWD2_C WD40_RFWD3 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 PROPPIN WDR54 WD_LRWD1 Beta-prop_IFT122_2nd DUF2415 Nucleoporin_N
Other DBs
NCBI-GeneID: 114159732
NCBI-ProteinID: XP_027897626
LinkDB
Position
2:30926277..30931658
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSEADGSETIITGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHHGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINFFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDHTHFVSSSSDKSVKVWDASTRACINTFFDHQDQVWCVKYNSKGSKIVSAGDDRAIHI
YDCPL
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacccagtacagcattctgttcaagcaagaacatgctcatgacgatgccatctgg
acagcagcatggggcaaaagcgaagcagacggctcggaaactatcatcaccggttcacta
gatgatttggtcaaagtctggaaatggtcagacgagaagctggagctgcagtggaccctg
gagggccaccagctgggcgtggtctctgtggacatcagtcaccacggagccatcgctgcc
tccagctccctggacgcacatatccgcctgtgggacctggagtcggggaaacagatcaag
tccatggatgccggaccagtcgatgcgtggacagtcgccttctctccagactctaagtac
atcgccacaggcagccatcttggaaaagtgaacatctttggtgtggaaagcggcaagaag
gaatattccctggacaccagaggaaaattcatcctcagtatagcttacagccccgacgga
aagtatttagccagcggcgcgatcgatgggatcatcaacttcttcgacatcgccaccggg
aagctactccacacacttgaaggtcacgccatgcccatcagatccctcaccttctccccg
gactcccagctgctggtcacagcctccgatgacggatatatcaaaatatacgacgtacaa
catgccaaccttgccggcacgctgagcggccatgggtcctgggttcttaatgtggcgttc
tctccggatcacacccactttgtctccagctcgtctgacaagagcgtgaaagtttgggac
gccagcaccagagcttgtatcaacactttctttgaccatcaagaccaggtgtggtgcgtg
aagtacaacagcaaaggctcaaagatcgtctcggccggcgacgaccgcgccatccacatc
tacgactgcccgttgtga

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