Xiphophorus couchianus (Monterrey platyfish): 114159823
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Entry
114159823 CDS
T05908
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
KO
K14573
nucleolar protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114159823 (rbm28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114159823 (rbm28)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114159823 (rbm28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114159823
NCBI-ProteinID:
XP_027897815
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All DBs
Position
2:complement(16409363..16419778)
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AA seq
759 aa
AA seq
DB search
MPALTIFVASLPESATNERLEEIFSEIGPVKQCFVVREKGAEKCRGFGFVTYSMEEDAKR
ALKEIKEYDGKKLSLSVAKKKVNNKKKTEKEDASETSQHEQETTDVKKRISKQARLVIRN
LSFKCTEQDLKETFEKFGTVVEASIPLKPDGKMRGFAFVQFKNMSGATKALQALNLKEIK
GRQVAVDWAVPKENYIAAQQSLKGNKVAEEADPKAGSESEDEEKKRETAVKKKGGLKATA
QQVENLQSSDEDDIEEEDDDDGDAEEEEDDEEQDEIKEEDNSDDDGDDDGIDSDEDYSES
DDEEEEEISPVQKQKPKKHLPSDVNEGRTVFIRNLSFDTEEEGLEEVLLQFGEVNYVKIV
LHPETQHSKGLAFAQFKTKEAADSCIAAAQDETENGGVRADGRKLMIVTAVSREDALKLK
VDKKKVETGSRNLYLAREGLIRAGTKAAEGVSEADMAKRVRFEEIKRAKLRDISVFVSKN
RLCIHNLPKSVDDKKLKALCLKGLQGTKGVRITECRVMYDRKPEKGRVTGQSLGYGFVQF
RDHEQALATLRYLNNNPDIFGPHKRPIVEFSLEDSRKLKLKEMRKQRNKDFIQSRPVKRE
VKKSQTGSDTKITKKDGNKGQSSSHLAGKEKDTGEGQKQNFSGFHTKPEIEHVDLQNGKK
RKKVLLFPSHRGPKIRMRDKDKQQVPPPKKARPGSKRNKGPTQPFEKSNQAKKQFKNAKK
QFKRKDGDRFDSLVEQYKRKLMGGGDKNASIKRSKWFDS
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgctaacgatattcgtggcatctttgccagaatcagcaacaaacgagcggctt
gaggaaatattctctgaaattggtccagtgaaacaatgcttcgttgttagagaaaaagga
gcagagaaatgtcggggcttcggcttcgtcacttattctatggaagaagacgcaaagaga
gccttgaaggaaataaaagaatacgacgggaaaaagttgtctctttcagttgctaaaaag
aaagtaaacaataaaaagaaaacagaaaaagaggatgcgtcagaaacatctcaacatgag
caggaaactacagacgtaaagaaaagaatatctaaacaagccagacttgtcataaggaat
ctcagttttaagtgcacagaacaggatctaaaagaaacatttgaaaagtttggcactgta
gtggaggccagtatacccctcaaaccagatggaaagatgcgtggatttgcatttgtccag
tttaaaaatatgtctggtgccacaaaggcactccaagctttgaatctgaaagagataaaa
ggtcgccaagtagcagttgactgggctgtgccaaaagaaaactatattgcagcacagcag
tctttaaaaggaaataaagttgcagaagaggcagatcccaaagcaggaagtgaatctgag
gatgaagaaaagaaacgagaaacagctgtgaagaaaaaaggtggattgaaggcaactgca
cagcaggtggagaatcttcagtcaagcgatgaagatgacattgaagaagaagatgatgat
gatggtgatgctgaagaggaggaggatgacgaagagcaggatgaaattaaggaggaggat
aatagtgatgatgatggcgatgatgatggcattgattcagatgaggattacagtgagagt
gatgatgaagaggaagaagaaatttcaccagttcaaaaacaaaagccaaagaaacacttg
ccttcagatgtaaatgagggccgaacagtttttatcaggaacttgtcatttgacacggaa
gaggagggtctggaggaagttcttctacagtttggagaggtcaactatgtaaagattgtc
ctccacccagagacacagcattccaaaggtcttgcatttgcccagtttaagactaaagag
gctgcagatagctgcatagcagcagcccaagatgagacggagaacggtggagtccgtgca
gatggcagaaagctgatgattgttacagcagtgagcagagaagatgcactgaagctgaaa
gttgataagaaaaaagtagagacgggcagcaggaacctgtacctggccagagaaggattg
atccgcgctggaacaaaggcagcagagggagtatctgaggcagatatggccaaaagagtc
agatttgaagaaataaagagagccaagcttcgggatataagtgtatttgtatcgaaaaat
cgcttgtgcatccataacctgccaaaatctgtagacgataaaaaactcaaagctctgtgc
cttaaaggtctacaaggaaccaaaggagttcggatcacagagtgtcgggtcatgtatgac
aggaagccagagaaaggtcgagtgactggtcagtcgttgggttatggtttcgttcagttt
cgagaccatgagcaggctctcgccacgctgcgctaccttaacaacaaccctgacatcttt
ggccctcacaagagacccattgttgagttctctctggaggattccaggaagctcaaactc
aaggaaatgcggaaacagagaaataaagacttcatccaaagtcgacctgtaaaaagagaa
gtaaaaaaatcccaaacaggttcagacaccaaaataacaaagaaggatggaaataaagga
cagtcttcatcacatctggcaggaaaggagaaagacactggtgaaggacagaagcaaaac
ttttcaggttttcataccaaaccagagattgaacatgttgatttacaaaatggaaagaaa
cgaaagaaggttttgctttttccttcccatcgtggacctaagatcagaatgcgtgacaaa
gacaagcaacaggttccacctcccaagaaagcaaggcctggatctaaaaggaacaagggc
ccaacacaaccatttgaaaagtctaatcaggccaaaaaacagtttaagaatgctaagaaa
cagttcaagaggaaggatggggaccgttttgattccttggtggagcagtacaagaggaaa
ctcatgggcggcggtgacaagaatgcctccatcaaaagaagcaagtggtttgatagttaa
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