Xiphophorus couchianus (Monterrey platyfish): 114159826
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Entry
114159826 CDS
T05908
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
xco04137
Mitophagy - animal
xco04144
Endocytosis
xco04340
Hedgehog signaling pathway
xco04350
TGF-beta signaling pathway
xco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114159826
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114159826
04350 TGF-beta signaling pathway
114159826
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114159826
04137 Mitophagy - animal
114159826
09144 Cellular community - eukaryotes
04520 Adherens junction
114159826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114159826
04121 Ubiquitin system [BR:
xco04121
]
114159826
03029 Mitochondrial biogenesis [BR:
xco03029
]
114159826
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
114159826
Membrane trafficking [BR:
xco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114159826
Autophagy
Mitophagy
Other mitophagy associated proteins
114159826
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
HECT type E3
114159826
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
114159826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
114159826
NCBI-ProteinID:
XP_027897817
LinkDB
All DBs
Position
16:complement(19996527..20061893)
Genome browser
AA seq
770 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLNKL
SPNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPVSTNGATPTTASPPSDSNQRAQERRVRSQ
RHRNYMSRTHLHMHPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSSNGSRGGSESQNVSR
QNQTKEQVQQALVSPGQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIEVS
REEIFEESYRQVMKMRPKDLWKRLMVKFRGEEGLDYGGVAREWLYLLSHEMLNPYYGLFQ
YSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKPIT
LDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVSQDNK
KEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLGKIDINDWK
SNTRLKHCTPDTSIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLF
TIHQIDASTNNLPKAHTCFNRIDIPPYETYDKLYDKLLTAIEETCGFAVE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagtccggcggaatggccccgtcaaactgagattaacagtcctgtgt
gccaaaaacctggcaaagaaagacttcttccgcctccccgatccgtttgccaaggttgtc
gtggacggttcaggccagtgccactccacagacactgtgaggaatacgcttgaccccaag
tggaaccaacactacgatctgtacatcgggaaatcggattcaatcaccatcagtgtgtgg
aatcacaagaagatacataagaagcaaggggctgggttcctgggctgtgtccgccttctg
tctaacgccatcaaccgccttaaagacacaggctaccagagactagacttgaacaagctg
agccccaatgacagtgacacagtccgggggcagattgtagtgagcctgcagtcgagggac
cgcatcggcaccggaggccccgtggtggactgcagtcggctgttcgacaacgatcttcca
gatggctgggaggagaggaggacggcgtctggacggatccagtacttgaaccacatcaca
cgcaccacgcagtgggagaggccgaccaggcccgcgtcggagtactccagccctggacgt
ccgctcagctgcattgtagacgagaacacgcctgttagcacgaacggcgccacgcccacc
accgcgtcgcctccgagcgacagcaaccagcgagcccaggagaggcgggtgcggtcgcag
cggcaccgcaactatatgagcagaacccacctgcacatgcacccagaccttcctgaggga
tacgagcaaaggacgacgcagcaaggtcaagtttacttcctccacactcagacgggtgtc
agcacatggcatgaccccagagtacccagagacctgagcaatgtgaactgtgaggaactc
ggtccgctgccgccgggatgggagatccgcaacaccgccacagggagggtctacttcgtc
gaccacaacaaccgaaccacgcagttcaccgacccgcgcctctccgctaacctgcatctg
gtcctaaatccaagttccaacggttctcgaggaggcagcgagagtcaaaatgtcagccgt
cagaaccagacgaaggagcaggtccagcaggccctggtgtccccgggccagctcccagaa
gaggccgagtgtctcaccgtgcccaagtacaagcgagacctggtccagaagctgaagatc
ctgcgccaggagctgtcccagcagcagcctcaggccggccactgtcgcatcgaggtgtcc
cgcgaggagatctttgaggagtcgtatcggcaggtgatgaagatgaggccgaaggacctg
tggaagaggctgatggtgaagttcaggggtgaagaaggcctcgactacggaggagtggcc
agggagtggctctacctgctctcgcatgagatgctgaacccgtactacggcctgttccag
tactcccgcgacgacatctacacgctgcagatcaacccggactccgccgtgaatcctgag
catttgtcgtacttccactttgtagggcgcatcatggggatggctgtgttccacggccat
tacatcgacggcggcttcaccctcccgttctacaagcaactgctgggtaaacccatcacc
ctggacgacatggagtctgtcgacccagacctgcacaacagcctggtttggatcctggac
aacgacatcacgggtgtgctggaccacaccttctgcgtggagcacaacgcgtacggcgag
atcatccagcacgagctcaaacccaacggcaagagcatccccgtctcccaggacaacaag
aaggagtacgtccgcctctacgtcaactggcgcttcctgcggggcatcgaggcgcagttc
ctggcgctgcagaagggcttcaacgaggtcatcccccaacacctgctcaaggccttcgac
gagaaggagctggagctgatcgtgtgcggcctggggaagatcgacatcaacgactggaag
tccaacacgcggctgaagcactgcacgccggacaccagcatcgttaagtggttctggaag
gccgtggagtcgttcgacgaggagcgccgggcccgactgctgcagttcgtcaccggatcc
tccagggttcccctgcaggggttcaaggcccttcaaggcgctgcagggccacgtctcttc
actatacaccagatcgatgccagcaccaacaacctgcccaaagcccacacctgtttcaac
cgaatcgacattcctccctacgaaacctacgacaaattgtacgacaagttgctcactgcc
atcgaagagacgtgcggcttcgccgtggagtga
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