Xiphophorus couchianus (Monterrey platyfish): 114159856
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Entry
114159856 CDS
T05908
Symbol
dnmt1
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1 isoform X1
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00270
Cysteine and methionine metabolism
xco01100
Metabolic pathways
Module
xco_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
114159856 (dnmt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114159856 (dnmt1)
03032 DNA replication proteins [BR:
xco03032
]
114159856 (dnmt1)
03036 Chromosome and associated proteins [BR:
xco03036
]
114159856 (dnmt1)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
xco02048
]
114159856 (dnmt1)
Enzymes [BR:
xco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
114159856 (dnmt1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
114159856 (dnmt1)
DNA replication proteins [BR:
xco03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
114159856 (dnmt1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114159856 (dnmt1)
Prokaryotic defense system [BR:
xco02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
114159856 (dnmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
BAH
DNMT1-RFD
DMAP_binding
zf-CXXC
RST
Motif
Other DBs
NCBI-GeneID:
114159856
NCBI-ProteinID:
XP_027897878
LinkDB
All DBs
Position
16:9153995..9165267
Genome browser
AA seq
1508 aa
AA seq
DB search
MPSKTSLSLPDDVRKRLQKLDEDGSPEEDQVKEKLRLVQDFLHDDAQDQLTNLEEKMKNS
EISKEVYISKVKVLLGKELRLENGSHEDGVEQNGKANGFVNGSHKDKEDEDVNMATEQEE
TETKSPPALKGKGGRRSKANSETKKSPTSTRVTRNSGKQPTILSMFSKVQKRKSEDLNGE
AINGINEAQKEDDTEETQVEKRLRVDSDEKLAPEESKSKITKPGPAAKTPPPKCPDCRQY
LDDPDLKMFQGDPDNALEEPEMLTHESLSLFEANEDGFESYDHLPQHRITNFSVYDKHGH
LCPFDSGLIEKNVELYFSCYVKPIYDDSPGLTSGVFARKLGPINAWWITGFDGGEKALIG
FTTSFADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQKNPDATYEDLLNKIETTVPPA
GLNFNCFTEDTLLRHAQFVVEQVESYDEAGDSDEQPIIVTPCMRDLIKLAGVTLGKSMQL
YWRAARRQTIRHPTKIEKDSKGPTKATTTKMVYQIFDAFFADQIEQNDKEGGVKRQRCGV
CEVCQSPDCGKCTACKDMIKFGGSGKSKQACKQRRCPNLAVKEAEDDENIEEEDVPAEKT
KKVLQTKKKRQTQSKLAWVGEPVETAGKRQYYKKVSLNDEVLEVGDCVSVSSEDPSTPLY
LARITSLWEDNNGKMFHAHWFLRGIHTVLGESSDPLELVIVDECEDMLLNYVQGKVNVMY
KAPSNNWFMEGGVDVDLKVIDDDGKSFFYQFWYDTEFARFETPPKTEQSVDCKLRFCGSC
ARTKERDEQEVPRAFEPLENEDSDSKALYALACFKGEQFRVGDSVYMPPEAFSFSVKPAS
PVKRSHRKEDVDEDLYPEYYRKSSDYIKGSNLDAPEPFRVGRIKEIFCHRRSNGKSDTSE
VKLRLYKFYRPENTHRGVKASYHTDINQLYWSDEEVTVSMSEVLGRCQVEYAEDLNESVQ
DYSSGGPDRFYFLEAYNAKSKSFEDPPNHARSCVHKGKGKGKGKGKGKGKASQEPQESRM
EPQALKVPKYRTLDVFSGCGGLSEGFHQAGISETLWAIEMWEPAAQAFRLNNPGTTVFTE
DCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVV
SYLSYCDYYRPKFFLLENVRNFVSFKNSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQT
RRRAIILAAAPGEKLPRYPEPLHVFAPRACSLTVAVDEKKYVSNVTRGNGGIYRTITVRD
TMSDLPEIRNGAASLEISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVEARMRHIP
LAPGSDWRDLPNIEVRLKDGTTTKKLRYTHHDKKNGRSSTGALRGVCTCAGGKTCDSADR
QFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHAEQHRVVSV
RECARSQGFPDTYRFFGNILDKHRQVGNAVPPPLSRAIGLEIKKCISDRMKEEQATADIK
QEKMEVSD
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgccatccaaaacgtccttgtctttgcccgacgacgtgagaaagaggttgcagaagctg
gatgaagatggttctccagaagaggatcaggtgaaagagaagctaaggttggtgcaggac
ttcctgcatgatgacgctcaggaccagctgaccaacctggaggagaaaatgaagaattca
gaaatctcaaaggaggtttacatctctaaagttaaggtcttgctgggcaaagagcttcgt
cttgaaaatggctcgcatgaggacggcgtggagcagaatggcaaggcgaatgggtttgtt
aatggctcccataaagataaagaggacgaagatgtaaatatggcgacagaacaggaagaa
acagaaaccaagtcaccacctgctctcaaagggaaaggtggacgcaggagcaaggcaaac
tctgaaactaaaaaatcaccgaccagtaccagagtcaccagaaacagtggcaaacagcca
accatcttgtcaatgttctctaaagttcagaaacgcaaatctgaggacttgaacggagaa
gctatcaatggaataaatgaagcgcagaaagaagacgacactgaagagactcaggtggag
aaacgcctcagggtggattctgatgaaaaacttgctccagaggagtcgaaatccaagatt
actaaaccaggacctgctgcaaagacgccacctcctaaatgccctgactgtaggcagtat
ctggatgatccagatctgaagatgtttcaaggggatcctgataacgcgcttgaagagcca
gagatgttaacacatgagagtttgtcgctgtttgaggctaatgaggatggatttgagagc
tacgaccatctgccacaacaccggatcacaaacttcagtgtgtacgacaagcatggccat
ctttgcccatttgactctgggctgattgagaagaacgtggagctttacttcagctgctat
gtgaaaccaatctatgacgacagcccgggcttaaccagcggtgtttttgccagaaagctt
ggacccatcaacgcctggtggataactggtttcgatggaggagaaaaggctttaattgga
ttcacaacatcttttgccgattacatcctgatggagcccagtgaggagtacgctcccatt
ttcgcactgatgcaggagaaaatctacatgagcaagattgtggtggaattcctccagaag
aacccagacgccacctacgaagatcttctcaacaagattgagaccaccgtccctccagca
ggactgaacttcaactgcttcactgaagacaccttgttgcgccacgcccagtttgtggtg
gagcaagtggagagttacgatgaggccggcgactcagatgagcagccaatcattgttact
ccctgcatgagagatctgatcaaactggcaggagtcaccctgggaaagagcatgcagctg
tactggagagcagccagaagacagaccatccgccacccaactaagatagagaaggacagc
aagggaccaaccaaggccaccacaaccaagatggtctaccagattttcgatgccttcttc
gctgatcagatagagcagaatgataaggagggaggagtcaaacggcagcgctgtggagtc
tgcgaagtgtgccagtctcctgactgtggcaagtgcacagcctgtaaggatatgatcaaa
tttggaggaagtggcaaaagcaagcaagcttgtaagcagagaagatgtccaaaccttgct
gtaaaggaggctgaggatgatgagaatattgaggaggaagatgttccagcagagaagacc
aaaaaggttcttcaaaccaagaaaaagagacagacccagtccaaacttgcatgggttggt
gagcctgttgagaccgcagggaagaggcagtactacaagaaggtctccttgaacgatgaa
gtgctggaagtgggagactgcgtctcagtttcatcagaagatccgtccactcctctgtat
ctggcaaggatcacttcattgtgggaggacaataatgggaagatgtttcatgcccactgg
ttcctccgtgggatccacacagtcctcggagagtcctctgatccactggagctggttatc
gtcgatgaatgtgaagacatgctgctcaattatgtacagggaaaagtgaacgtcatgtac
aaagctccatcaaacaactggttcatggagggtggggtggatgttgacctgaaggtgatt
gatgacgatgggaagagtttcttctatcagttctggtatgacacagagtttgctcggttt
gagactcctcctaagactgaacaatcggtagactgcaagctcagattctgtggcagctgc
gcccgtactaaagagcgagatgagcaggaagtacctcgagcgtttgaacccctggagaat
gaggacagtgacagcaaggctctgtatgcgttggcctgcttcaagggagaacaattcagg
gttggagacagcgtctacatgcctcctgaagccttcagttttagtgtgaaaccagccagt
ccggtgaagcgctcccacagaaaagaggatgtggatgaagatttgtatccggagtactac
agaaagtcttcagactacattaaggggtcaaacctggatgccccagagcctttccgtgtt
ggccgcatcaaagagattttctgtcatcgccgcagcaatggaaaatcagacacctcagag
gtcaagctgaggctctacaagttctacaggccggagaacacacacagaggcgtcaaagcc
agttaccatacagacatcaatcagctctactggagtgatgaggaagtgacggttagcatg
tctgaggtacttggacgctgtcaagtagagtacgcagaagacctgaatgaatctgtccaa
gattactccagcggtggaccggaccgcttctatttcctggaggcttacaacgctaaatca
aagagttttgaagatcctcctaaccatgcccgctcttgtgttcataaagggaaggggaag
ggcaaaggaaaaggtaaaggcaaaggaaaagcatcacaagaaccacaagagtctcgcatg
gaaccacaggcacttaaagtaccaaaatatcgcacccttgatgttttctctggctgtggt
ggactttctgaaggcttccaccaggctggtatctccgagaccctctgggctattgaaatg
tgggagcctgctgcacaggcgttcagactcaacaatcctggcaccacagttttcacagag
gactgtaatgtccttcttaagctggtcatgtctggagaaaagaccaactcccttggccaa
aagctgcctcagaagggagatgtagaaatgttgtgcggcggacctccttgccaaggtttc
agtggaatgaatcgcttcaattctcgcacttattctaagttcaaaaactcactcgtggtg
tcctatctgagttactgcgactactaccggccgaagttcttcctgctggaaaacgtgagg
aactttgtatccttcaagaactccatggtcctgaagctgactctgcgctgcctagtgcgg
atgggctaccagtgcacctttggagtccttcaagccggtcagtatggcgttgctcagacc
cgccgcagggcaatcatcctggctgctgctccaggagagaagcttcctcgctaccctgag
cctctccacgtgtttgctcccagagcgtgctcgcttaccgtggcggtcgatgagaagaaa
tacgtcagcaacgtgacgcgagggaacggtggcatctacaggaccatcacagtccgggac
accatgtctgacctgcccgagattcgcaatggtgctgcttctttggagatttcctacaac
ggagaacctcagtcctggttccagaggcagatcagaggctcgcagtaccagcccattctc
agagaccatatttgcaaggacatgagtgctctggttgaggccaggatgcgtcacatccct
ctggctccgggctccgactggagagatctgcccaacattgaagttcggttaaaagacggc
accacgacgaagaagctacgttacacgcatcatgataagaagaacggacgcagcagcacc
ggtgctctcagaggagtctgcacctgtgcaggagggaaaacctgcgattctgctgacagg
cagttcaacacgctgatcccctggtgtctgccccatactgggaaccgccacaatcactgg
gccgggctgtacggcagactggagtgggacggtttcttcagcacaaccgttaccaaccct
gaacccatggggaagcagggccgtgttctgcatgcagagcagcacagagttgtcagtgtg
agggagtgcgctcgctctcagggcttccccgacacctaccgcttttttggaaacatcttg
gacaaacacagacaggttggaaatgctgtacctcctccactctccagagccatcggcctg
gagattaagaaatgcatctcagacaggatgaaggaggaacaagctacagcagacatcaaa
caagagaagatggaggtctctgattaa
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integrated database retrieval system
