Xiphophorus couchianus (Monterrey platyfish): 114159872
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Entry
114159872 CDS
T05908
Symbol
grin2a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114159872 (grin2a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114159872 (grin2a)
04082 Neuroactive ligand signaling
114159872 (grin2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114159872 (grin2a)
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114159872 (grin2a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
114159872
NCBI-ProteinID:
XP_027897910
LinkDB
All DBs
Position
16:16858086..17027832
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AA seq
1546 aa
AA seq
DB search
MQGMKWFSTMSLGSKRSRRSTNRRGGGESALLSLALLVAVTAMVDPVAAQKQRAGGGSDK
VPVLNIAVILGCTRYISDQDIRALWSKEDPIDVNVVTLLVNKTDPKSIITHMCDLMSGTK
IHGVVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASIQQE
ALLMLNIMEEYDWHVFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVEEDSR
SQIMLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNPEITPEAFPS
GMISVSYDDWDYPLEARVRDGLGIITSAAAAMLVEYGDIPEAKTSCYGPMEKTSKLPPSA
LHKYMMNVTWDGRDLSFTEDGYQEYPKLVVIVLNKEREWEKMGKLDNRSLTLKYPVWPRF
NSFGDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIK
KCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLT
INEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAV
FMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSV
WAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERN
IRKNYPAMHQYMVKYHQTGVVDALVSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSG
YIFATTGYGIALQKGSFWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLD
VDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGRPGLLFSISRGIWSCIHG
VHIDMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIMDMMA
EKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDANPNTV
EVAVSADTVQTNAKSQRTLWKKSTDTLRSVPPGPSPMPDMLMPDPRISMKTQRYLPEDTA
HSDISDCSSRGATYKDPENNKHLKPKDNLKKRSMTSKYPRDCSEVELSYLKTKQVSGGTN
QSGRGGGGEKIYTIDSDREMSLHSDPVHYRESHGLGTDDLDYPEIYSDHSDNYRKCEQPI
IHLNSSPMHHTDSDLLPDSAYSKHYSLKEKNISLSPHESIDRYKQTHCRSCLSKVPSSYQ
QGGSYVATGSATASGTRSPYNRCDACLHTANLYDISEDQLLGDPLVSPTMHHQEQQQPDE
MFGLYWPQTDGPHVQKRNRLRLNRQHSFDNIMLEKPKDVDPGRPARSVSLKEKDRFLDSA
SDSHYANLFGMRPYSGRLFGTGSKSMLFNNNLEESKRSKSLYPTHGSENPFLSHSLRDDT
SSRLVHGRSSSDIYKQLAVGSPSLALGAAPIKTRNDANNLRSSVKSTSSYCSRDGRIAND
MYNKEHVMPYSANKTSAYPASRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgcaggggatgaagtggtttagcaccatgtccctcggcagcaaaaggagtagaaggagc
accaatcgtcgcggtggaggtgaaagtgcgctgctctccctggcccttctggtggcggtg
acggccatggtggaccccgtagcagcgcagaagcagcgggcgggtggtggttcggataaa
gtgccggttctgaacatcgctgtgatcctggggtgcacgcgctacatctcagaccaggac
attcgggcgctgtggagcaaagaggaccctattgacgtcaacgtggtcacactgctggtc
aacaagaccgaccccaaaagcatcatcacccacatgtgtgacctgatgtcagggaccaag
atccacggcgtggtgtttggggatggcactgaccaagaggccattgcccagattttggat
tttatttcctcgcagacactcatacccattttgggcatccatggaggctcgtccatgatc
atggctgacaaggatgtgaagtcgacatttttccagttcggtgcttccatccagcaggag
gctctgttaatgctgaacatcatggaagagtatgactggcatgtgttctcaattgtcacg
tcaaagtttcctggataccaagagttcatcaacatcctaaaaactacagtggacaacagt
tttgtgggctgggacctgcagaatatcatcactctggatgccgtggaggaagacagccgg
tctcagattatgctgaagaaggtccagtctccagtggtcctgctttactgctctaaagat
gaagcggtgtacattttggaggaggctcgctctctgggcctgactggattcggttacatc
tggattgtaccgtcgctcacgacggggaaccccgagataacaccggaagcatttccatcg
gggatgatttcagtgtcgtatgacgactgggactacccgttggaggcgcgcgttcgtgat
ggactggggatcataacgtctgccgcggcagccatgttggtggagtacggtgacatccca
gaagccaagacatcctgttatggcccgatggaaaagacatcaaagctcccgcctagcgca
ctacacaagtacatgatgaacgtgacatgggatggcagggacttgtcattcacagaggat
ggctaccaagaatacccaaagcttgttgtcattgttctcaataaagagcgagagtgggaa
aagatgggaaaacttgacaatcgcagcctgacactaaaatacccagtgtggccacggttc
aactcttttggtgatgccgaacttgacgacaaccacctgtccattgtcaccttggaggag
aaaccctttgttattgtggaggatgttgaaagactcactggtacctgtatgaggaactct
gtgccctgcaggaagcatatcaaagacaacacaactgaggctggtggaacatatatcaaa
aagtgctgcaaaggcttctgcattgacattctgaagaagattgccaagtacgtcaaattt
acgtatgacttgtacctggtaaccaatggcaagcatggcaagaaaatcaacaatgtctgg
aatgggatggtgggagaggtggtctataagaaagccgtcatggccgtcggatctctgacg
atcaatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtagaaactgggatc
agcgtcatggtctcacgtagtaatggaactgtctcgccatcagcttttctcgagccattc
agtgcatcagtgtgggtgatgatgtttgtgatgctcctactggtgactgcaatggctgtc
ttcatgtttgagtacatcagtcctcttggctttaacagaaatctggcacaaggaaaagat
ccccacggtccttcttttaccatgggcaaggccgtttggctgctgtggggtctggtcttt
aacaactctgtgccagtgcaaaaccccaaaggaaccaccagcaagttcatagtgtcggtg
tgggccttctttgctgtcatcttcctggcctcctacactgctaacttggctgccttcatg
attcaggaggagtttgttgaccaagtcactgggctgtcagacaacaagtttcagaatcca
tatgcgtactctcctccgttccgctttgggacagtcccgaatggatccactgaaaggaac
atcaggaagaactacccagccatgcaccagtacatggtgaagtaccatcaaactggtgtt
gtggacgcacttgtcagcctcaaatcaggcaaactggatgccttcatttatgatgctgca
gtgttgaactacatggctgggagagatgaagggtgtaagcttgtgaccatcggcagcggg
tacatttttgctaccactggttatggcattgctctgcagaaaggttccttctggaagcga
caagtggatctggccatcttggctatcatcggagatggtgaaatggaagaactggaggcc
cagtggctgacaggaatctgtcacaatgagaagaacgaagtcatgtcaagtcagctggat
gtggacaacatggcgggggtcttctacatgctggccacagcgatgggactctccctcatc
acctttgtctcggagcatctcttctactggaggctgagatactgcttcaccggagtctgc
tctggcaggccagggcttcttttctccatcagcaggggaatctggagctgtatccatgga
gtacacattgacatgaagaaaaagacagaccttgacttcagcccccaggacaaaatgctt
aagctcattaagtctgcgaaacagatgaccaacatgtctaacctcagtggctcccgcatg
aactcgcctaaacgagaattcatgcactcagctggtcccatgatcatggacatgatggca
gagaaaggcaacttcatttatgctgacaacagaagctatgctcccaaagatatgatctat
ggggacactggtgaccttcagtcttatcttgcaaatcgccacaaagaccacctcaacaac
tatatttttcaaggtgggcagcatcccctgaccctgaatgatgccaatccaaataccgtg
gaggtagcagtgagtgctgacacggtccaaacaaatgcaaagtctcagcgaaccttgtgg
aaaaagtcaaccgacacattgcgttctgtgccaccggggccttctccgatgcctgacatg
ctaatgcccgatccacgaatatccatgaagacacagcgctacctcccagaagacacagcc
cactccgacatctctgactgttcaagcaggggagccacctacaaggacccagaaaacaac
aagcacctgaaacccaaggacaacttaaaaaaaagatccatgacgtcaaaataccctagg
gattgcagtgaggtggagctgtcctacttaaaaactaagcaggtcagcggtggaaccaac
caaagtgggagaggaggaggaggagagaaaatctacacaattgattcagacagggagatg
agcctccattcagatcccgttcactaccgtgagagtcatggtcttggaacagatgatttg
gattaccctgaaatttactctgaccacagtgataactatagaaagtgtgagcagccaatc
attcatctgaactcctcacctatgcatcacacggactcagatcttctgccagactcggct
tactctaaacactacagcctaaaagagaaaaatatctccctgtcccctcatgaatccatt
gaccgctacaaacagacacactgccgatcctgcctgtccaaagtaccctctagctaccaa
caaggagggtcttacgtcgctacaggatctgccacagcatctgggacgcgatctccatac
aatcgatgtgatgcatgccttcacacagccaatttgtatgacattagtgaggaccagctt
cttggtgatcccttggttagccccaccatgcatcaccaagagcagcagcagccagacgaa
atgtttggtctatactggccacagacagatgggccacatgtccaaaaaagaaaccgcttg
aggctaaatcgtcagcactcctttgacaacatcatgctcgaaaagcccaaggatgtagac
ccgggccgaccagcacgcagcgtcagcctcaaagagaaggatcgctttttggactcagca
tctgactcccactatgccaatctctttgggatgcgcccttactccggcagactctttggc
actgggtctaaatcaatgctgtttaacaataaccttgaggaaagcaagaggagcaagtcc
ctgtacccaacccatggctcggaaaaccctttcctcagtcactcattgagggatgatacc
agcagcagactggtccatgggcgtagctcctctgacatttacaaacagctggcagtaggt
tctccttcattggccctaggagcagctcccatcaaaacacgcaatgatgcgaacaatctt
cgctcttctgttaaatccacctcttcatactgctcaagggatgggcggatagctaatgac
atgtacaataaagagcatgtgatgccttactcagccaataagactagtgcatacccagcc
tcaaggggtgtcctaaactcagcccagttcagcaatagacgggtgtataagaaaatcccc
agtctggagtcagatgtttag
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