Xiphophorus couchianus (Monterrey platyfish): 114159931
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Entry
114159931 CDS
T05908
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114159931
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114159931
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
PH_11
MYO6_lever
IQ
COG3_N
DUF641
Motif
Other DBs
NCBI-GeneID:
114159931
NCBI-ProteinID:
XP_027898011
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All DBs
Position
2:complement(13993542..14022260)
Genome browser
AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFENESSS
RPSGLYLLEGCLCDRAPSPKPSLSAKECLEKQYYFTVNFTHENQKALELRTEDVKDCDEW
VAAISHASYRNLATEHESLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEISG
LLKDNEKIHASPAAAPTEDDSEIKKIKKVQSFLRGWICRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLDSEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHIERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIIEGCEVLLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLMEEPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTIILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFED
NSKVTVPQMIKSDSSLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTTADVVLDKLITIYKKPISAIPARSLELFFASSQNNKLLYGEAPSSPRAS
RKFSSPPPLAIAKNSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSTMSPFSK
TTLDINKLYVSSPITSKIPDEGEDKKDKVEDTSVCKQDLSVREESDNDQNQSDDGDPEAS
PTKSPTTPKNIKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHFPDFESNNELKT
KVIAFLEEVMHDPELLTQERKAAANIIRTLTQEDHSDNQITMEDVTQLVGGGKAEPFESH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMRTTKHFNDTSNLIATEI
LRCDDLVTRVAVIEKWVAVADICRCLHNYNAVLEITSSLNRSSVFRLKKTWLKVSKQTKA
LIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKVDLQPKVAQYLLDKSFVLDEESMYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagggaatacgactcaacgatggtcatgtcacctatctggggcttttggcgaag
aaggatggtacaagacgagggtgcttaagcaaaaagagctcggacaacacgaaatggcac
acaaagtggttcgctttgttgcagaacatgttattttattttgagaatgaatctagctct
cggccgtcgggattatacttgttggaggggtgcttatgcgacagggcgccttcaccaaaa
ccttctctgtcagccaaggagtgcttggaaaagcagtactactttactgtcaacttcacc
catgaaaaccaaaaggctcttgagttgcgtacagaagatgtaaaagactgcgatgaatgg
gtggctgcaatatcacacgccagttacagaaacttggccacagagcatgagtctctcatg
cagaagtatcttcatctgcttcagattgtcgagacagagaaaacagttgctaagcaactt
cgtcaacagatagaagatggcgaaatagagattgaaaggctaaagtcagagatttctgga
ctgctcaaagacaatgagaagatccatgccagcccagcagccgccccaacagaagacgac
tcagaaatcaaaaagatcaaaaaggttcagagctttctgagaggctggatctgcaggaga
aagtggaagaccatcatccaggattacatccgctcacctcatgcagagagcatgaggaag
aggaaccaggtggtgttcagcatgctggactcagaggccgagtacgtccagcagcttcac
atcctggtgaacaacttcttgaggccacttcgcatggccgccagctctaagaagccgccg
attacacatgatgatgtcagcagcattttcctcaacagtgaaactattatgttcctgcat
cagattttttaccagggtttgaaggccagaatagctagctggccaacattagtactggct
gaccttttcgacatcttgctacccatgctgaacatctaccaagaatttgttagaaaccac
cagtacagcttgcagatcctggctcactgtaagcaaaaccgggattttgataagctgctg
aagcagtatgaggccaagcctgattgtgaggaacgaactctggagactttcctcacttac
ccaatgttccagattccaagatacattcttacactccatgagcttctggcccacactccc
cacgaacacatagaaaggaacagcttggactacgccaaatctaagctggaggagctttcg
agaataatgcatgatgaggtgagcgagacggaaaacatcaggaagaacctggctatagaa
cgcatgatcatagagggctgcgaagtcctccttgacaccagccagacgtttgtgagacaa
gggtctttaatccaggtgccaatgagcgagaagggcaagatcacccgtgggcgactgggt
tctctctctctaaagaaggagggggagaggcagtgctttctcttctccaagcatttgatc
atctgcaccaggggttcaggaggcaagcttcatctcactaagaacggagtggtctcgctt
atagactgcactctgatggaggagcctgaggggacagatgacgagtctaaatccgataag
agtggccaggacatggagcacctggattttaagattgttgtggagccaaaggacagtcag
tcattcacgatcatcctggtggcctcctccaggcaggagaagtctgcgtggaccagtgac
atcagccagtgcatagacaatatccgctgcaatgggctgatgatgaacgcttttgaagac
aactctaaagtcacagtgccacagatgataaaatccgattcgagtttgtactgtgatgat
gtggatatccgcttcagtaagatgatgaactcctgcaaagtgctgcagattcgctatgcc
agcgtcgaacgtttgctggaaagactgaccgatctccgtttcctttcgattgactttctg
aacactttcctgcactcctaccgcgtgttcaccacagctgatgtggtactggataaactc
attactatctacaagaagcccatcagtgccatccctgctcggtccctggagttattcttt
gccagcagtcagaacaataaacttctttatggagaggctccgagctctcccagagcaagc
aggaagttttcctcccctcctcctcttgctattgccaaaaactcatcccccaaccgccga
cgcaagctctctctcaacatccccatcatcactgggggcaaagctcttgacctggctgcc
ctcagctgctcctccaatggctatgcaagcatgtattccaccatgtcaccattcagtaag
actaccttggacatcaacaagctgtacgtgtccagcccgatcacaagcaagatccctgat
gagggagaggacaagaaagataaggtggaagacacatcagtgtgtaaacaagatctttct
gtgcgagaggaaagcgacaacgatcaaaaccagagcgatgatggggatccagaagcatct
cccaccaagtctccaaccacaccaaaaaacatcaaatgcaaaaactcctcagagttttct
ttgttttcctacaacaatggcatggtcatgtcctcatgtcgagagctcgacaacaaccgt
agcgctttgtctgctgcctcggcctttgccattgccacagctggagccaatgagggaacg
cctacaaaggaaaaatatcggcggatgtcccttgccagcacagggtttccaacagatcag
agaaacggtgacaaggagtttgtgatcagacgagcagcaaccaacagagtcctgaatgta
ctgaggcattgggtgtccaaacactttccggactttgagagtaacaatgagctgaagaca
aaggtcattgcctttctggaggaagtgatgcatgaccctgagctgctgacccaggagagg
aaagcagcagccaatatcatcaggactttaactcaggaagaccacagtgacaaccagatc
acaatggaggatgtgacacaattagtaggaggggggaaggccgagccgtttgagagccac
tccgccttggaaattgcagagcagctaactctgcttgaccacctggtgtttaaagtcatc
ccatatgaggaattcttcggtcaaggctggatgaagaatgataaaaatgagaagacacca
tacatcatgagaaccaccaagcatttcaatgatacaagcaacctgatcgcaacagagatc
ctgcggtgtgatgacttggtcactcgagtggctgtcatagagaaatgggtggctgtggct
gacatctgccgttgtttgcataactacaatgctgtgcttgaaatcacctcatctctaaac
cggagctctgtttttcgcctcaagaagacctggctaaaagtctccaaacagacaaaagca
cttattgacaagctccaaaagctggtttcatcagagggaaggttcaaaaacttgagagaa
gctctgaagaactgtgatcctccctgtgtaccatatctggggatgtacctcactgatttg
gctttcattgaagaaggaacgccgaactacactgaagacaatttggtcaacttctcaaag
atgaggatgatatctcacatcatcagagaaatcaggcagtttcagcaaacagcatataag
gttgacctgcaaccaaaggtagcccagtacctactggacaagagctttgtccttgatgag
gaaagcatgtatgaagcctcactcagaattgagcctaaagtgcccaactga
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