Xiphophorus couchianus (Monterrey platyfish): 114159984
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Entry
114159984 CDS
T05908
Symbol
llgl1
Name
(RefSeq) lethal(2) giant larvae protein homolog 1
KO
K06094
lethal(2) giant larvae protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114159984 (llgl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114159984 (llgl1)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114159984 (llgl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_Prp19
Lgl_C
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
114159984
NCBI-ProteinID:
XP_027898093
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All DBs
Position
16:17775199..17811739
Genome browser
AA seq
1064 aa
AA seq
DB search
MMKFRFRRQGTDPQREKIKQELFAFNKTVEHGFPHQPSALAFDPKLQLMAIGTKSGAIKI
YGAPGVEFTGLHKDTTAVTQIHFLPGQGRLLSLLDDNTIYLWELVVGPHREVGGAKKEGG
VCLKQVDNYTLPGRPGIESCSATHVTVLLLLKSCDLFCVGTEGGGVYFVELPRLELKESQ
TLLQDQVTQSLPDEYRCGKSLGPVESLQEHPQQPGKILIGYSRGLVVLWDLGARHADQLF
LGKQQLESLVWERSGSLFVSSHNDGGYAVWPVTSGNACTHQPASSTIPYGPFPCKAINKI
LWRTSQTGPPVLLYSGGMPRASYGDRHCLTIQQDKEHVTLDFTSRVIDFFTIHNMEPDKE
CDDPSALVVLLEEELVVIDLQTPGWPTLPTPYLAPLHSSAITCSCHISSVPPKLWERLIN
AGKAQRSRQHTHMSWPICGGKNLAPPPKQQELLLTGHEDGTVRFWDASGVALTPLYKLGT
ANVFHTDCDEPPDSSNDTDMQQEEEWPPFRKVGCFDPYSDDPRLGIQKISLCKYSNKLLV
AGTAGQVIVLALNDELSDHSVDVSVVDLLQDREGFTWKGHDRLEARLKPAPFPPGFQPQV
LVQCLPPASVTAVALHTEWNLIAFGTSHGFGLFDYHQRNTVLARCTLHPNDSLAMEGPLS
RVKSLKKSLRQSFRRIRKSRVSGKKRAITTPTSKVQEANAALAEQEEVAPVQRRIEPRSA
DDSLSGVVRCLCFADTFLRDGTHHGPTLWAGTNSGSVYAYALEVPGVGSGRACERGGASE
SGTCVEAVLGKEIQLMHRAPVVSISVLDGRGKPLPDPYEASQDLAIAPDMTNAHSVLIAS
EEQLKVFSLPKVSAKTKFKLTAHEGCRVRKVALVLFNSAAQEDYSEHTLVCLTNLGDMHL
FTIPTLRPQVRYDCIRKEDISGIASCVFTKSGQGFYLISPSEYERFSLSAKVLTEPLCSV
QLDRPLEPTAISDGTTMHPQANGTHRNQTGQAEGRTEESPCTLSSPILETPLDSPLSCAN
LTLDTTGEITVEDVRDFLTTVDEAENNLRNMKEEEGRSAGILIN
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagttcaggtttcgtcggcagggcaccgacccgcaaagagaaaagataaaacag
gaactcttcgcttttaacaagactgtggagcatgggttcccccatcagcccagtgccctg
gcctttgaccccaagctgcagctgatggccattggcacaaagtcaggagccataaaaatc
tacggggctcctggagtcgagttcacagggctacacaaagacaccaccgctgtaactcag
atccacttcctacctggtcagggtcgtctcctgtcgctgctggatgacaacacaatttat
ctttgggaactggtggtagggccccacagagaagtgggcggggcaaagaaagagggcgga
gtctgtcttaaacaagtggataattacactctgcctggaaggcctgggattgagagctgc
agcgccacgcatgtgactgtcctcctcttgctaaagtcatgtgacctgttctgcgtcgga
acagaaggaggaggcgtttactttgtggagttgccccgccttgagttaaaggagagccag
acgctgctgcaggaccaggtcacgcagagcctgccagatgagtacagatgtgggaagtca
ttggggccagttgaatccctccaagagcatcctcagcagccagggaagattctgattggc
tacagccgcggcttggtggtcctgtgggatctgggcgctcgccacgctgaccagctgttc
ctcggcaagcagcagctggagagcctggtgtgggagcgctctggaagcctgttcgtcagt
tcccataacgatggaggatacgctgtgtggcccgttaccagtggcaacgcttgcactcac
cagccagcatcatccaccatcccatatggtccgtttccttgcaaagccatcaacaaaatc
ctctggaggacttcacagacaggtcctccagtgctgctgtacagtggggggatgcccaga
gccagctacggagaccgccactgtctgaccatccagcaggacaaagagcacgtcactctg
gacttcacatcccgggtcatcgacttcttcaccatccacaacatggagccggacaaagag
tgcgatgacccgtcggctttagtggtgctgctggaagaggaactggttgtgatcgatcta
cagaccccggggtggcccaccctgcctacaccctacctcgcgcccctccactcatcagcc
atcacctgctcctgccacatctccagtgtgcctcctaaactctgggagaggttaatcaac
gcgggcaaggcgcagcgaagccggcagcacacacacatgagctggcccatatgtggagga
aagaatctggcgcctccacccaaacagcaagagctgcttttgaccgggcacgaggacggg
acggtgcgcttctgggacgcgtcgggcgtcgccctcacgccgctctacaagctcggcacg
gccaacgtcttccacaccgattgcgacgagccgcccgactccagcaacgacaccgacatg
cagcaggaggaggaatggccccctttcaggaaggtgggctgctttgacccgtacagcgac
gatcccagactcggcatccagaaaatcagtctgtgcaagtacagcaacaagctgctggtg
gctggaacagccggccaggtgatcgtcctggctcttaacgacgagctttcggaccactcg
gtggacgtgtcggtggtggacctgctgcaggacagggagggcttcacctggaaaggccac
gacaggctggaggcgcgtctcaaacccgcgcccttcccaccgggcttccagccgcaggtg
ctggtccagtgtctgccgcctgcgtcggtcacggcggtggcgctgcacacggagtggaac
ctgatcgccttcgggacgagtcacgggttcggcctgtttgactaccaccagcgaaacacg
gtgctggcgaggtgcactctgcatcctaacgactcgctggcgatggagggtccactgtcc
agagtcaagtccttaaagaaatcccttcgacaaagcttcagacgcatccgtaaaagcagg
gtgtctggaaagaaacgtgccatcaccactcctaccagcaaggttcaagaggccaacgcg
gctttggcagagcaggaggaagtagctcctgtgcagcgacggatcgagcctcggtcagcg
gacgactcattgtcaggagtggtcagatgtctctgcttcgctgacacatttctgcgtgat
ggtacacaccacggccccacgctttgggccggcaccaactcgggcagcgtgtacgcctac
gctctggaggtccccggcgtgggatcgggccgcgcgtgtgagcggggaggagcgagcgag
agcggcacgtgtgtggaggcggtgctggggaaggagatccagctgatgcacagagcgccc
gtggtgtccatcagcgtcctggacgggcgagggaaaccactaccagatccgtacgaagcc
tcacaggacctcgccatcgctccggacatgaccaacgctcactctgtcctcatcgcctca
gaggagcagctcaaggtgttctctctccctaaagtgagcgctaagaccaagttcaagttg
acggcacacgaaggctgccgggtgaggaaagtggccttagttcttttcaactccgctgct
caggaagactacagcgaacacacactcgtctgcctcaccaacctcggagacatgcacctc
tttaccatacccaccctccgacctcaggtgcgatacgactgcatccgcaaggaggacatc
agtggcattgcatcttgtgtcttcaccaaaagcgggcaggggttttacctgatctcccct
tcagaatatgaaaggttttccctttctgccaaggtgctaacagaaccgctctgctctgtt
cagctggaccgaccactagagcccacagccatcagtgatggtacaacaatgcacccgcag
gccaacgggacccacagaaaccaaacgggtcaggctgaggggcgaacggaggagtctccc
tgcaccctgtcttctcccatcctggagacgccgctggactcccccctcagctgcgccaat
ctcaccctggacaccaccggggagatcaccgtggaggacgtcagggacttcctaacgact
gtggacgaggccgagaataacctgaggaacatgaaggaggaagagggacgctccgctggc
atcctcatcaactga
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