Xiphophorus couchianus (Monterrey platyfish): 114160028
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Entry
114160028 CDS
T05908
Name
(RefSeq) GTP-binding protein 1-like isoform X1
KO
K24887
GTP-binding protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114160028
03016 Transfer RNA biogenesis [BR:
xco03016
]
114160028
03012 Translation factors [BR:
xco03012
]
114160028
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
114160028
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
114160028
Translation factors [BR:
xco03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
114160028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D2
GTP-eEF1A_C
MMR_HSR1
Dynamin_N
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
114160028
NCBI-ProteinID:
XP_027898176
LinkDB
All DBs
Position
16:15063478..15070974
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AA seq
682 aa
AA seq
DB search
MASVAAEHEPGIISGSGALADALVPASIFAPDRGGCGEEDCDECLEDEDMTNGKPEDRRI
DCSSKLALVSPNGEQYDSLLRQLRDRMEDGCGETIYVVGMGSDGGDWGLDEKDMEASVAT
IHSMCEQLDSDLIPLRERTEAAGMVVDYLIRRRVGELDFLEVRVAVVGNVDAGKSTLLGV
LTHGELDNGRGFARQKLFRHKHEMESGRTSSVGNDILGFDQEGQVVNKPDSHGGSLDWTK
ICEKSSKVITFIDLAGHEKYLKTTVFGMTGHLPDFCMLMVGSNAGIVGMTKEHLGLALAL
NVPVFVVVTKIDMCPANILQETLKLLQRLLKSPGCRKIPVLVQNKDDVIVAASNFSSERM
CPIFQISNVTGENMDLLKMFLNLLSSRTSYRDDQPAEFQIDDTYSVPGVGTVVSGTTLRG
LIRLNDTMLLGPDPLGSFIPIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVM
VSPKLNPQATWEFEAEILVLHHPTTISPRYQAMVHCGSIRQTATILSMNRDCLRTGDKAS
VHFRFIKTPEYLHCDQRLVFREGRTKAVGTITKLLHSTNNMPSNSKPPQIKMQSTKKVPL
RKEDGTMATSDDAATIAQPAGSSMSQPGEGDDDPQIKEGNKENKPKSGGGGRRRGGQRHK
GKGQNSSTNSMAAPSSTATGNS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagtagcagcggagcatgagccaggaataatatcgggctctggagctctggct
gacgctttagttcccgcgagtatatttgctccagaccggggaggatgtggggaagaggac
tgcgacgagtgcctcgaggatgaggacatgaccaatggcaaacccgaggaccggaggatt
gattgcagcagcaagctggcacttgtaagcccaaacggggagcagtatgattcgttactc
cgacagcttcgggacagaatggaggatggctgtggggaaaccatctatgtggttggaatg
ggttctgatggtggtgactggggtctggatgagaaagacatggaagcctcagttgccaca
atacactcaatgtgtgagcagctggactctgacctcatccctctcagagagcgcactgag
gctgctgggatggtggtcgactatctgattcggaggcgtgtgggtgagctggacttcctg
gaggtcagagtcgcagtggtggggaacgtggacgccggcaagagcactctgctgggagtg
ttgacacatggcgagctggacaatggcaggggatttgcccggcagaaacttttcaggcat
aaacatgagatggaaagtggcaggaccagcagtgtgggcaacgatatcctgggctttgac
caggagggtcaggttgtgaacaagcctgacagtcatggagggagcctggactggaccaag
atctgtgagaagtcctctaaagtcattaccttcatagacttagctggccacgagaaatat
ctcaagaccactgtgtttgggatgactggacaccttccggacttctgcatgcttatggtt
ggcagtaacgctggtattgttgggatgaccaaagaacatcttgggctggctttagctctg
aatgtgccagtcttcgtagtggtaaccaaaatagacatgtgtccagccaacatcttacaa
gagaccttgaagttactccaaaggttactcaagtctcctggctgcaggaagattcccgtc
cttgtacagaacaaagatgatgtgatagtcgcagcttcaaacttcagttcagagaggatg
tgcccaatctttcagatttccaacgtaactggggagaacatggacctgctaaagatgttt
ctcaacctgctctcctccagaacatcatacagagacgaccagcctgctgagtttcagata
gatgatacctactctgttccgggagtaggaactgtagtttcaggaactaccttacgaggg
ctcatacgtctgaatgacaccatgctactgggtccagatcctcttggaagcttcatcccc
attgctgttaaatcaatccaccgcaaacgaatgcctgtaaaggaggtcagaggcggccag
actgcctcgtttgctttaaaaaagatcaagcgttcgtctataagaaaaggcatggtgatg
gtgtcgccaaagttaaacccccaggcaacttgggagtttgaggctgaaatcctggttctg
catcatcccacaacgatatcccccagataccaggcaatggtccactgtgggagtatacga
cagaccgccaccatcttgtccatgaatagagactgcttaaggacaggggacaaggcttca
gttcatttccgcttcatcaaaaccccagagtaccttcactgtgaccagaggctggtgttc
agagagggtcgcaccaaagctgtgggaaccatcactaagctgttgcactccactaataac
atgccatcaaactccaaacctccacaaatcaaaatgcagtctacaaaaaaggtgccactc
agaaaagaggatggcaccatggcaaccagcgatgatgcagcaacgatagcacagccggct
ggctcaagcatgtcgcagccgggggagggagatgatgaccctcaaataaaagagggcaac
aaagagaacaagccaaagtctgggggaggtggaaggagaaggggtggccaaagacacaaa
ggaaaaggccaaaatagcagcaccaactcaatggcagcaccctcctcaacagcaacagga
aacagctga
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