Xiphophorus couchianus (Monterrey platyfish): 114160056
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Entry
114160056 CDS
T05908
Symbol
mgrn1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04120
Ubiquitin mediated proteolysis
xco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114160056 (mgrn1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114160056 (mgrn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114160056 (mgrn1)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114160056 (mgrn1)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114160056 (mgrn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
114160056
NCBI-ProteinID:
XP_027898226
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All DBs
Position
16:8803001..8809599
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AA seq
548 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDTSVEDGGKPKVQYGV
EFTFDADARVAITLYCQAFEEFSNGMAMYSPKDPTMVSETVHYKRGVSQQFSMPSFKIDF
SEWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLRSVSPPIPSAPLYDEINFSGSLGGDSRQLSSPEHLSDGNLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTDATATEDVAESLSPDDEDR
MPSGGDILQDCSSEHCSLTKAESDPAGDLSLPGSSDSTESLKSQSTNCSSQPLLCPTSSL
HMEDEHFN
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtccatcctgagtcgtaggattgctggtgttgaagacatcgatatccaggcaaat
tcggcctatcgatttcccccgaaatctgggaattacttcgccagccatttcttcatggga
ggagagaaatttgatactccacatccagagggctacctctttggggaaaacatggacctg
aattttcttggaaataggccagtgcagtttccatatgtgacacctgcaccccatgaacca
gtgaaaaccttgaggagtctggttaacatacggaaggactctctccgtttagtgaggtac
aaagacgactcggacacttcggtggaggatggcgggaaacccaaggtccagtacggcgtg
gagtttacctttgatgctgatgccagggtcgccataacactctactgccaggcgtttgag
gagttctccaatgggatggctatgtacagtccaaaagatccaaccatggtctctgagaca
gtgcactacaagcgtggggtgagccagcagttctccatgccgtccttcaaaatagatttc
agcgagtggaaagaggaagatctaaactttgatttggaccgaggagtgtttcctatggta
atccaagctgtggtcgatgaaggagatgattgtcttggacatgctcatgtgcttttggca
gcatttgaaagacatgttgacggcagtttctccgtcaagcctctgaagcagaagcaaatc
gtggaccgtgtcagctacctcctccaggaaatctatgggattgagaacaaaaacaaccaa
gagaccaagccatctgacgatgagaacagcgacaacagcaatgagtgtgtcgtctgtctg
tccgacctgagagacacactcatcctgccttgcagacacctgtgtctctgcaactcctgc
gcagacactctgcgctatcaggccaacaactgtcccatctgcaggctgccctttagagcc
ttgctgcagataagagccgtgaggaagaaacctggagctctctctcctgtgtccttcagt
cctgttctggctcaaactatggaccatgatgagcactcaagctccgactcggtcccgcct
ggtttcgaacccatctccctgctggaggcgctgaacggtctgcggtcggtgtctcccccc
atcccttctgcgccgctgtatgacgaaatcaacttctccgggagtctgggaggggacagc
cggcagctgagctctccggagcatttaagtgacggaaatcttcagaaaggaaaagtcagc
aagtcacctgacagcaccctgagatcgccatcctctcccatccaggaggaggatgaagag
aaactgtctgagatgtctgacgcgcagccacacacactactctccagcagccccgctccc
acagatgctacagccaccgaggatgtggcggaatctctttctccagacgacgaggacaga
atgccgtctggaggagacatcctgcaggactgcagcagtgagcactgcagcttgaccaaa
gcagaaagcgacccagcgggggatctgtctttgcctggttcgtcagactcgacggaaagt
ctaaaaagtcagagcacaaactgctccagccagcctctcctgtgtcccacaagcagcctt
catatggaagatgaacatttcaactga
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