Xiphophorus couchianus (Monterrey platyfish): 114160068
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Entry
114160068 CDS
T05908
Symbol
elavl3
Name
(RefSeq) ELAV-like protein 3 isoform X1
KO
K13208
ELAV like protein 2/3/4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114160068 (elavl3)
03041 Spliceosome [BR:
xco03041
]
114160068 (elavl3)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114160068 (elavl3)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
114160068 (elavl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
BRAP2
RRM_3
RNA_bind
Motif
Other DBs
NCBI-GeneID:
114160068
NCBI-ProteinID:
XP_027898245
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Position
16:8958720..8976028
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AA seq
385 aa
AA seq
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MVTQIISTMETQVSNGPSGTSLPNGPVISTNGSTDDSKTNLIVNYLPQNMTQEEFKSLFG
SIGEIESCKLVRDKITGQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSA
SIRDANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEA
EEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTQLYQTAARRYTGPLHHQTQRFSV
IPSLGKGPDPNSSSNTILDNLLNASYGVKSSPPLFPRFSPITIDSMTSLAGVNLTGPTGA
GWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAI
ASLNGYRLGDRVLQVSFKTSKQHKA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggttactcagataatcagcaccatggaaacgcaggtgtccaacggtccaagcggaacc
agtctgcccaacggcccagtcatcagcacaaatggctccacagatgacagcaaaaccaac
ttgatcgtcaactatctgcctcagaacatgacccaggaagaattcaaaagtttgtttggg
agcattggagagatcgaatcctgcaagctagtcagagataagataacaggtcagagtttg
ggatatggttttgtaaactatgtggatccaaatgacgcagacaaggctatcaacacacta
aatggtctcaaattgcagactaaaacaatcaaggtatcatatgccaggccaagttcagcc
tccatccgtgatgccaacctttatgtgagcggactccccaaaaccatgagccagaaagac
atggagcagctgttctcccagtatggtcgcatcatcacgtcccgcatccttgtggaccaa
gttacagcaggcatatcacggggagtgggcttcatccggtttgacaagcgaaatgaagca
gaggaggccatcaaaggactgaatgggcagaagcctttgggtgccgctgagccaatcaca
gtcaagtttgccaacaacccaagccagaaaacaggccaggccttactgactcagctgtac
caaactgctgcccgtcgctacacgggacccctgcaccaccagactcaacgtttcagtgtg
atcccttcacttggaaagggaccagatccaaatagcagctcaaacacaatactcgacaat
ttactaaacgccagctacggagtcaagagttctcctcctctctttcccagattctccccc
atcaccattgacagcatgaccagtctggccggtgtcaacctaaccggtcccaccggagcc
ggctggtgcatctttgtctacaacctgtcgcccgaggcggacgagagcgtcctgtggcag
ctctttgggcctttcggcgctgtcaccaatgtcaaagtcatccgtgacttcaccaccaac
aaatgcaagggcttcggcttcgtcacgatgaccaactacgacgaagccgccatggctatc
gccagtctaaatggctaccgcctgggcgatcgcgtgctgcaggtttccttcaaaaccagc
aagcagcacaaggcctga
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