Xiphophorus couchianus (Monterrey platyfish): 114160108
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Entry
114160108 CDS
T05908
Name
(RefSeq) integrin beta-3-like
KO
K06493
integrin beta 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03266
Virion - Herpesvirus
xco04081
Hormone signaling
xco04145
Phagosome
xco04148
Efferocytosis
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
114160108
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
114160108
04512 ECM-receptor interaction
114160108
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114160108
04148 Efferocytosis
114160108
09144 Cellular community - eukaryotes
04510 Focal adhesion
114160108
09142 Cell motility
04820 Cytoskeleton in muscle cells
114160108
04810 Regulation of actin cytoskeleton
114160108
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114160108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114160108
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114160108
04515 Cell adhesion molecules [BR:
xco04515
]
114160108
04090 CD molecules [BR:
xco04090
]
114160108
Membrane trafficking [BR:
xco04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
114160108
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114160108
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin beta subunits
114160108
CD molecules [BR:
xco04090
]
Proteins
114160108
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
114160108
NCBI-ProteinID:
XP_027898336
LinkDB
All DBs
Position
16:complement(6344405..6359099)
Genome browser
AA seq
790 aa
AA seq
DB search
MGSLLPYLVYLFLFASNVCGSNICTSRGVTTCRECLVVHPSCAWCSDEVFGKGRSTLSRC
DLKENLVKEGCSAAAIEFPTSKLEIQQNNPLSDRASSTADVTQIRPQKIQLTLRIGDTKR
FTVSVKQVEDYPVDLYYLMDLSYSMKDDLLKLQTLGNKLAETMGKTTSKLHMGFGAFVDK
TTYPYLITYPKGAIQNPCVGINDQCQAQFGFKNVLSLTEKVSRFTEEVQKQKVSRNRDSP
EGGFDAIIQAMVCKDKIGWRPDASHLLVLTTDAKTHLALDGRIAGIVQPNDGECHLDDNN
NFNKSTVLDYPSLGLITDKMSENNINLIFAVTSYVVPLYQEYSQLIPGTTVGTLSDDSGN
VIQLIKEAYEKIRSKMELELLGVPEELNLSFNASCLNGEVIRGLRSCSGLKIGDTVSFTV
DAQLRSCPKEKSRTFTIKPLGFKDSLEVTVNFACGCDCEAKAVPNSPVCSNGNGTYECGV
CQCHPGRLGSLCECSQEDYRPSDNANCLPNSNSSICSGRGDCLCGQCSCHSTGFGQVWGK
YCECDDFNCLHFKGALCSDHGKCNCGFCQCDAGWKGDNCNCTTRTDTCVSSSGLLCSGRG
NCECGVCQCTQPGAFGDTCDRCPTCPDACTIKTQCVECQHFKRGQYINDSSCNRICKNEI
QIVDQLSNKMNGNGEFQQGIAVNCSYKDENCIVHFQYYEDKTGTSILYVVKEPECPEGPD
ILVVLLAVAGAILLLGLVGLLIWKLLVTIHDRKEYSKFEEEKAKAKWDTANNPLYKGATS
TFTNVAYKGN
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgggttccttattaccctatttagtctatctgtttctctttgcgtcaaacgtttgcggt
tccaacatatgcacatctcgtggagtcaccacttgtcgagaatgtcttgttgttcatcct
agctgtgcatggtgctctgatgaggtgtttgggaaaggaagatccactttatctcgctgt
gacctcaaagaaaacctagttaaagaagggtgcagcgctgcagctatagagtttcccacc
agcaagttggaaattcagcagaacaatcctctcagtgacagggcttcgtctacagctgat
gtaactcaaatcaggcctcagaaaatccagctgacattaaggataggtgacaccaagcgt
ttcacagtgagtgtgaaacaggtggaggattaccccgtggacctctactacttgatggat
ctctcatattcaatgaaagatgatcttttaaagttgcaaaccctgggcaacaagcttgct
gaaacaatgggcaaaacaactagtaaactgcacatgggatttggagcatttgtggacaag
accacttacccatacctcattacctaccctaagggggcaattcaaaatccttgtgttgga
attaacgaccaatgccaggctcagtttggtttcaagaacgtgttgtcgctgacagagaag
gtgtctcgcttcactgaggaggtgcagaaacagaaggtgtccagaaatagggatagtcca
gagggcggatttgatgctatcattcaagcaatggtgtgcaaggacaagatcggatggcgt
ccagatgcctcacatcttctggtgttgaccactgacgccaaaactcatctggccctggat
ggacgcatagctggcatcgttcagcccaatgacggagagtgtcacctcgacgataacaat
aatttcaacaaatccactgtgctggactatccttcattgggcctaataacagataagatg
tctgaaaacaacatcaatttaatttttgctgtgaccagttatgtcgtacccctgtaccag
gaatacagtcagctgattccaggcacaactgtgggaacgctatctgatgactctgggaat
gtcattcagctgattaaggaggcctatgagaaaattcgctctaaaatggagctggagctc
ttgggagtcccagaggagttgaatctctcatttaatgcttcttgcctcaatggagaggtg
attcgtggactcaggtcctgctctggtttgaagatcggggacacagtgtctttcactgtg
gatgctcagctccgtagctgccccaaagagaagagccgcacttttaccatcaaacctctg
ggcttcaaagattcgctggaggtgacagtaaactttgcttgtggctgtgactgtgaggcc
aaggcagtacccaacagtccagtgtgcagcaatggcaacgggacctatgagtgtggagtt
tgccagtgtcaccctggccgactgggttcgctctgcgagtgctcgcaggaggactatcgt
ccgtccgacaatgccaactgcctcccaaattctaacagctcgatatgcagtggaagagga
gactgcttatgtggacagtgctcctgtcactcaactgggtttggtcaggtctggggaaag
tactgtgaatgtgacgatttcaactgtttgcacttcaaaggggctctttgctctgatcat
gggaagtgtaactgtgggttctgccagtgcgacgctggctggaaaggagacaactgtaac
tgcaccacccgcacggacacttgcgtgtccagctcagggctgctgtgcagcggccggggt
aactgcgagtgcggggtttgtcagtgcactcaacccggtgccttcggagacacgtgtgac
aggtgccccacctgccctgacgcctgcacgataaagacgcagtgtgttgaatgtcagcac
ttcaaaagaggacagtacatcaatgacagcagctgcaacagaatctgcaaaaatgaaatt
caaattgtggaccaattgagtaataaaatgaatgggaatggggaattccaacaaggcatt
gcagtgaactgctcctacaaagacgagaactgcattgtgcacttccagtattatgaagac
aaaactggcacatctatcttgtatgtggtgaaagagccagagtgtcccgagggtcctgac
atcctagtggtgctcttggcggtggctggagccattctgctcttgggtcttgttggtttg
ctcatctggaagctgctggttaccatccatgatcgcaaagagtattccaagtttgaggag
gagaaagccaaagccaaatgggatacggctaacaatcctttgtacaaaggagccacttcc
acttttaccaatgtagcgtacaaaggaaactag
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