Xiphophorus couchianus (Monterrey platyfish): 114160158
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Entry
114160158 CDS
T05908
Name
(RefSeq) cysteine protease ATG4D-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04136
Autophagy - other
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114160158
04136 Autophagy - other
114160158
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114160158
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114160158
03029 Mitochondrial biogenesis [BR:
xco03029
]
114160158
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
114160158
Membrane trafficking [BR:
xco04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
114160158
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114160158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
114160158
NCBI-ProteinID:
XP_027898410
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All DBs
Position
16:complement(20586566..20596829)
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AA seq
461 aa
AA seq
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MDPTTSSTYVYGRSAAVDQLDDWDLLPSVSAGSLSQEMCYEDRVAGDKSKLKSKLVSAWN
SVKYGWSLKQKSKFSKSSPLIMLGKTYNLKDSGDGERFRRSFASFLWLTYRRGFPQLPGS
SLTTDSGWGCVLRTGQMLLAHGLLIHLMPAVSELLLDWTWPVRYSAVKDDLDLLHPADWT
AGEVGSKRGRKLSVGSLLDRPMEATHRRVVGWFADHPTAPFGIHKLVELGQSSGKKAGDW
YGPSIVAHILKKAVAASVDLPNLVIYVAQDCTIYLQDVRGLCERPLPQSWKSVIVLVPVR
LGGQELNPSYIPCVKKLLMLQCCIGIIGGKPKHSLFFVGFQDDHLLYLDPHYCQPAVNIK
KDNFPLESFHCKQPRKMAFSRMDPSCTIGFYAKDQSEFELMCAAVNEAVSMSAETYPMFI
FSEEKRRDVEEESISSSITCIQRNDKLNNEDGNSMDEFVLI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaccccaccacgtcctccacctatgtttacggcaggtccgccgcggtcgaccagttg
gatgactgggacctcctcccctctgtgtctgctgggtctttgagtcaggagatgtgctac
gaggaccgggttgcaggggacaaaagcaaattgaaatccaagctggtctcagcatggaac
agcgtcaaatatggctggtccttgaagcagaaatccaaatttagcaagagctcgccactc
atcatgctggggaaaacctacaatctcaaagacagcggggacggggagcgtttccgccgc
tccttcgcgtccttcctgtggctgacgtacagacggggcttccctcagctgccgggctcc
tctctgaccacagacagcggttgggggtgtgttctgcgtacgggccagatgctgctggct
cacggcctgctcatacacctgatgcccgcagtctctgaacttcttctagactggacttgg
cctgtgcggtactcagccgtcaaggacgacctggacctgctccacccggccgactggacg
gcaggggaagtcgggagtaagagggggcggaagctgagcgtcggctccctcctggacaga
cccatggaagccacacacaggagggtggtgggctggtttgctgaccaccccacggccccg
ttcggcatacacaagctggtggagctggggcaaagctcggggaagaaggccggcgactgg
tacggcccatccatcgtggctcacatcctgaaaaaagctgtggcggcttcggtggatctc
cccaatctggtcatttatgttgcacaagactgcaccatctacctccaggatgtcagaggg
ctgtgtgaacggcccctccctcaaagctggaagtccgtcatcgtcctggttcctgtccgg
ctcggaggacaggagctcaatccttcctacatcccctgcgtcaaaaaacttctgatgctg
cagtgctgcatcgggatcattggtggcaaaccaaagcactctttgttcttcgttggcttc
caggacgaccatctgctgtacttggaccctcactactgccagcctgcagtgaacataaaa
aaggacaactttcccttagagtcgtttcactgtaagcaacccaggaaaatggccttttcc
cgcatggatcccagctgtaccataggattttatgcaaaagatcaaagtgagtttgagctc
atgtgtgcagctgtgaacgaggccgtctccatgtcggcagagacgtaccccatgtttata
ttctccgaggagaagcgtcgagacgtggaggaggaaagcatcagcagcagcatcacttgc
atccagagaaacgacaaactgaataacgaggacggcaacagcatggacgagtttgttctg
atatga
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