KEGG   Xiphophorus couchianus (Monterrey platyfish): 114160206
Entry
114160206         CDS       T05908                                 
Symbol
polr2f
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03020  RNA polymerase
xco03420  Nucleotide excision repair
xco04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114160206 (polr2f)
  09124 Replication and repair
   03420 Nucleotide excision repair
    114160206 (polr2f)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    114160206 (polr2f)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114160206 (polr2f)
   03400 DNA repair and recombination proteins [BR:xco03400]
    114160206 (polr2f)
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     114160206 (polr2f)
  RNA polymerase III system
   RNA polymerase III
     114160206 (polr2f)
  RNA polymerase I system
   RNA polymerase I
     114160206 (polr2f)
DNA repair and recombination proteins [BR:xco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      114160206 (polr2f)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 114160206
NCBI-ProteinID: XP_027898480
UniProt: A0A3B5MCU4
LinkDB
Position
16:19170279..19172859
AA seq 127 aa
MSDNEDNFDDGDFDYAEEDEGLDDLENVEDEDQENVQILPAGEGQQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLQIAMKELKSRKIPIIIRRYLPDGSYEDWGC
DELIVTD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtccgacaacgaagataacttcgatgatggagattttgattacgccgaggaggatgaa
ggattagatgacctcgagaacgttgaggacgaagatcaggagaatgtgcagatccttcct
gcaggagagggtcagcaggcaaaccagaagagaatcaccacgccgtacatgaccaagtat
gagagggccagagtgctggggacccgagctctgcagatagccatgtgcgctccggtcatg
gtggagttggaaggagaaactgaccccttgcagatagccatgaaggaacttaaaagcaga
aagatccccatcatcatccgtcggtaccttcctgacggcagctacgaggactggggctgc
gacgagctcatcgtaaccgactag

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