Xiphophorus couchianus (Monterrey platyfish): 114160222
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Entry
114160222 CDS
T05908
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114160222
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114160222
Membrane trafficking [BR:
xco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
114160222
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
114160222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
DUF7491
GAS
TolA_bind_tri
TPR_MLP1_2
Trimer_CC
BLOC1_2
YwqH-like
HALZ
DUF4200
Sec10_N
Fib_alpha
APG6_N
Motif
Other DBs
NCBI-GeneID:
114160222
NCBI-ProteinID:
XP_027898502
UniProt:
A0A3B5MIE1
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All DBs
Position
16:complement(4361260..4373182)
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AA seq
449 aa
AA seq
DB search
MESQRVQSSYRKRFGPQGGSGARIGSLSSNRLSWHGTPRSITLSSPISRLSLGSASTALL
LGSPGDRLDFSADSLMKAHYKEIRTNEKMEMMGLNDRFASYIEKVRLLEQQNKMLVAELN
QLKVKEPSRLGDIYQDELRELRRQVDGLTNGKARLEVERDNLAADLAMLKQRLQDEMTLH
QEAENSLNTFRQDVDEAALSRVQLERKIEALQDEINFLKKIHEEELRELQDQLVAQQVHV
DLDVSKPDLTAALRDIRVQYENMATSNMHETEEWYRSKFADLTDAANRNAEALRQAKQDA
NEYRRQVQALTCDLDALRGTNESLERQLRELEDRCAMEAAGYQDTVSRLEEEIQALKEEM
ARHLQEYQDLLNVKLALDIEIATYRKLLEGEESRITIPVQSFSNLQFRETNLDTKTPEAH
VKRSILVRTVETRDGEIIKESTTEHKDLP
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggagagccagagggtccagtcctcgtacaggaaacgttttgggcctcagggcggctcg
ggcgccagaatcggtagcctgtcttccaaccgcctctcctggcatggcaccccgcggtcc
atcaccctctccagccccatttccaggctctccctgggctctgccagcacggccctgctg
ctggggagccccggcgaccggctggacttctccgccgactccctgatgaaggcccactac
aaagaaatacgcaccaatgagaagatggagatgatgggcctgaacgaccgctttgccagc
tatatagagaaggtgcgcttgctggagcagcagaacaagatgctggtggcagagctgaac
cagctgaaggtgaaggagcccagccgcctgggagacatctaccaggatgagctcagggag
cttcgccggcaggtggatgggctcaccaacgggaaggcccgattggaggtcgagagggac
aacctggctgccgatctggccatgttgaagcaaagacttcaagatgagatgacgctgcat
caggaagcagaaaacagtttgaacactttcagacaggatgtggacgaagcggctctcagt
cgagtccagctggagaggaagattgaagctctgcaggacgagatcaacttcctgaagaaa
atccacgaggaggagctgcgtgagctgcaggaccagcttgtggcccagcaggtccatgtc
gatctggacgtgtccaaaccggatttgactgcggctctgagggacatcagagttcagtat
gagaacatggccacgtccaacatgcatgaaaccgaggagtggtaccgatccaagtttgct
gacctgacagacgcagccaatcgaaatgcggaggccctgcgccaagcgaagcaggacgcc
aacgaatatcggcgtcaggttcaggctctgacctgcgacttggacgctctcagaggcacc
aacgagtctctggagcgccagctgcgggagctggaggaccgctgcgccatggaggctgcc
gggtaccaggacacggtgagccgcctggaggaggagatccaggccctgaaggaggaaatg
gcccggcatctgcaggagtaccaggacctcctcaatgtcaaactggctctggacatcgag
atcgccacctacaggaaactgctggaaggagaggagagcaggatcaccattccagttcag
agcttttccaacctgcagtttagagaaactaatttggacactaaaactccagaggctcat
gtgaagcgaagcatcctggtccgaactgtggagaccagagacggggagatcattaaggag
tcaaccactgaacacaaagaccttccttga
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