Xiphophorus couchianus (Monterrey platyfish): 114160244
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Entry
114160244 CDS
T05908
Symbol
itga2b
Name
(RefSeq) integrin alpha-IIb
KO
K06476
integrin alpha 2B
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114160244 (itga2b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114160244 (itga2b)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114160244 (itga2b)
04810 Regulation of actin cytoskeleton
114160244 (itga2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114160244 (itga2b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114160244 (itga2b)
04515 Cell adhesion molecules [BR:
xco04515
]
114160244 (itga2b)
04090 CD molecules [BR:
xco04090
]
114160244 (itga2b)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114160244 (itga2b)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114160244 (itga2b)
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin alpha subunits
114160244 (itga2b)
CD molecules [BR:
xco04090
]
Proteins
114160244 (itga2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
114160244
NCBI-ProteinID:
XP_027898534
LinkDB
All DBs
Position
16:2716880..2729035
Genome browser
AA seq
1024 aa
AA seq
DB search
MCVFRCVCALLCVTASVCLNLLEKPVMFSGPAGSLFGFSIDFHSFNNIFFVVIGAPKANT
SQPGVTEGGGVFLCTWSPDGACDIIDFDLTGDEEHSLSGLRFHSFKSGQWFGASVRSVGS
THLLACAPLFHWNVNQKEAESGKTPVGNCLLLDQMTRSATPFSPCRGALMEDDYTQSSNR
NDQRYCEVGFSADITKDGRLVLGAPGSFYFQGQVITVGVSDIINSGQSDKPIQYVAGIHQ
SNEQENYDLYRGYSVASGLLTGDATTDYVVGVPNDRNTAGTVNIYDGRMAGSLRVHHTFL
GTQVASYFGHSVAVADINSDGLDDVLIGAPLFMDRVMGQLQERGQVLLYLQKKKSSFSSQ
PDQSLIGQSIYGRFGSALSVLGDLDMDGYQDVAVGAPWSDGGGGQVFIYLGNSNGLLATP
SQIINSPLLSSRSAFGFSLRSGVDLDGNGYPDLLVGAWGADQAFLYRSQAVIRSRVSVSL
LPDFLNPDVKLCHHKNTPVSCFAVRMCVYVSGHRIPQQTALRVELHLDMMKQPMARRTLL
LSNNQPQTSMELVVERQVGLVCTNHTAYLRSEEEVRDKLSPIFITAEISLLNSTQNGLLH
GQTHSTVQSRLILDCGDDNICIPDLKLSAKPVSDSVLIGDDQSLLLLVLATNDGEGAYET
ELVVQLPEHTHFQSCQGENRLVCVQRKENQTVVVTCDLGNPMKHRQKVQTGLFFSVGNLE
EVDNHITFSLRMRSKNSVNSSSNHVTVKVQVKAEATLEIRGGSVPPDVLLPHPDWQPVGN
LIGLEEVGPLMEHVYEIRNQGPSSVNARLTVDFPSTWRHHFLLYVISTPSEESLSCQTLN
TSDVMPLELVDNSSLTVVSQPIQQEETNSLEQTVHVNCSSSETGCVRFECDVMDLGRGFS
AVVKISARLNLHTLTQTSYLNYDLVSSASYDVISAPSKVQPLLLTSGHTQAQLSVVWRPP
DGEKPVPIGYIILSIISGLLLLFLLCFIFWKLGFFRRTRPPSDDDDGGEDDGEQQLAEES
HMTE
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgttcaggtgtgtgtgtgcgctgctgtgtgtcacggcaagtgtgtgtctgaac
ctgctggaaaaaccagtgatgttcagtggaccagcaggaagtttgtttggattctccatc
gacttccactccttcaacaacatattcttcgttgtgattggagctcccaaagccaacacc
agccagcccggggtcacagagggagggggcgtgtttctgtgcacctggtcacctgatgga
gcctgtgacatcatcgattttgacctgacaggtgatgaggaacacagcctctcaggtctc
aggtttcactcctttaagagcgggcagtggtttggagcttctgttcgctcagtcggcagc
acacacctgctggcgtgtgcgccactctttcattggaacgtcaaccagaaagaggcagag
tcagggaaaacacctgtaggaaactgtctcctattggaccaaatgaccaggagcgccaca
cctttctctccctgcagaggggccttgatggaggacgactacacgcagagtagcaacaga
aacgatcagcgctactgtgaggttggcttcagcgctgacatcaccaaggacggtcggttg
gtgcttggagctccaggaagcttctacttccagggtcaggtgatcacagtgggtgtcagt
gacatcatcaacagtggacagagtgataaacccatccagtatgtggctggaatccaccag
tcaaatgagcaggaaaattacgacctttacagaggttactcagtggccagtggtttgttg
actggagacgccacaacagattatgtggttggggttccaaatgacaggaacacggcagga
acagtgaatatctatgacggcaggatggccggctctctgagagttcaccataccttcctg
gggactcaggtggcgtcctactttggtcacagcgtcgccgtggcggacatcaacagtgat
ggtctggacgacgtgctgatcggagcgcctctcttcatggacagagtgatggggcagctg
caggagagagggcaggtccttttatacctgcagaagaaaaagtcctccttctcctcacag
cctgaccaatcactgatcggtcagtcgatctatggccggtttggctccgccctctccgtg
ctgggtgacctggacatggatggttaccaagatgttgcggttggggctccatggtcagat
ggaggtggtggccaggtgtttatttacctgggcaacagcaacggcctgttggctacgccc
tcgcaaattattaacagcccattacttagcagcaggtcagcgtttggattttctctcagg
tcaggtgtggatctcgatgggaacggatatccagatctgctggttggagcgtggggtgca
gaccaagcctttctctacaggtctcaggctgtgatccggtccagagtttctgtctcactg
ctaccagacttcctgaatccagatgttaaactgtgtcatcacaaaaacacaccagtttca
tgttttgctgtccgaatgtgcgtctatgtctctggtcacagaatccctcagcagacagct
ctaagggtggagctacacctggatatgatgaagcagccaatggcacgaagaactctgctg
ctgtcaaacaatcagcctcagacgtcaatggagctggttgtagagaggcaggtgggcttg
gtctgtaccaatcacacagcatacctgaggtctgaagaggaagttcgggataaactgagt
ccaatcttcatcaccgctgagatcagcctcctcaattctacccagaatggtctgctgcat
ggtcagacacactcaacagtccagagccggctgattctggactgcggggacgataacatt
tgcattcctgacctgaagctgagcgctaaacctgtatcagacagcgtgttgatcggagat
gatcagtccttgttgttgttggtgttggctacaaacgatggcgagggtgcgtatgagacc
gagctggtggtccaactccctgaacacacacacttccagagctgtcagggtgaaaaccga
ctggtgtgtgttcaaaggaaagaaaaccagacagttgttgtcacctgtgacctcgggaac
ccaatgaaacacagacagaaagtccagactggtctcttcttcagcgtcggcaacctggag
gaggtggacaatcacatcaccttcagcctaagaatgcgaagtaagaactctgtgaactcc
agcagtaaccatgtgacagtgaaggttcaggtgaaggctgaggccacactagagatcaga
gggggatccgtccctccagacgtcctcttaccccatccggactggcagccagtaggcaac
cttataggtctggaggaagtcgggccactgatggagcacgtgtatgagattagaaatcag
ggtcccagttctgtcaacgcccgactgaccgtggacttcccttctacctggcgacatcac
ttcctgctctacgtcatctccaccccgtcagaagagtccttgagttgtcagacactgaac
acatcagacgtgatgcctttagagctcgtagataactccagtcttactgtagtttctcag
cccatccagcaggaggagacaaactcactcgaacaaacagtccatgtgaactgcagcagc
agtgagacggggtgtgtccggtttgagtgtgatgtcatggatttggggcggggctttagc
gcagtggtaaaaatctcagctcggctaaatttgcacacactcacacagacctcctatctg
aactatgacctcgtttcttctgcctcttatgatgtcatcagcgcaccatcaaaggtccaa
ccactgctgcttacaagtggacacacacaggctcagctcagtgtggtgtggcgtcctcct
gatggggagaaacccgttcctattggctacatcatcctgtcaatcatctctggactcctc
ctcctcttcctcctctgcttcatcttctggaagctgggcttcttcaggcgcaccagaccc
ccctctgatgatgatgatggtggtgaagacgatggagagcagcaactggctgaggagagt
cacatgactgagtaa
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