Xiphophorus couchianus (Monterrey platyfish): 114160305
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Entry
114160305 CDS
T05908
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114160305 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114160305 (tbl3)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114160305 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
Cytochrom_D1
DDHD
Motif
Other DBs
NCBI-GeneID:
114160305
NCBI-ProteinID:
XP_027898655
LinkDB
All DBs
Position
16:13583569..13593888
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AA seq
923 aa
AA seq
DB search
MANTNLQFKTNYAVSSKIEPFYKGGKVQISKDEKYIFCTCGSRVNVLEISTGKIVHCVEH
DDQEDITSFAVSCDDELLVTASRALLLKQWDWRQGTCTRSWKAIHTIPVASMTFDPSSTL
LATGGCDATIKVWDVVKQYCTHNLKGSSGVVHLVQFHPDISRLQLFSSSVDCGIRLWDLR
SSQCVCVLDSHYSAVTSLSFSKDGDTMISSGRDKICTVWDLKSRQAKRTVPVYETVEGVV
LLPEKTDLSQIRVKSKTLHFVTAGSKGVLRVWEASTARCVYTQSLPSTLTPSSEEDKEDD
NPRSLTYLFHLPASSRLATVTAEHNILFYQLPSLTTQQQFVGYNDEVLDVKFLGKDDTHI
VVATNSCQLKVFQLLTNSCQILYGHTDTVLTLDVFKKGSLFASCAKDRSVRVWQLDSDSG
QVRCVAQGSSHTNAVGSIGCSRMKASFIVTGSQDCTMKVWDLPAEFSSEEIHQLSPRSTE
KAHDKDVNSVSVSPNDKLLASGSQDRTAKLWSLSGDGNLGLLGVFRGHRRGIWSVCFSPM
DQILASSSADGTTKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLVKLWTI
KTNECVKTLDAHQDKVWGLHGSRKDDKMVTGSADSNITVWLDVTKVELEEEQAKQEDQIL
KQQELSNLLHEKKYLKALGLAISLDQPHTVLTVIKAIRQVEDSSDLLETTLLRLRVDQKE
SLLRYCVVWNTNARNCLDAQAVLQVLLTHLPPEELLQFQGARTHLEGLLPYTERHMERIG
RLQQASMFLNYMWQKMRVAGASSGMEQDEDMDTTPLTQMQPLFFLDKEKARGSTDEREDQ
GDDGDREQEEESGFEVKDEEEAEEISASKKASANDAREKKGETNGRHKSESEESSEEEEE
DDHIMQVMRNLPISSAPRLQTLS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacacaaacctgcagttcaagacgaattacgctgtttccagcaaaattgagccg
ttttacaaaggaggaaaagtgcagatcagcaaagatgagaagtacattttctgcacatgt
ggatcccgtgtcaatgttttggagatcagcacgggcaagattgtccactgtgtggagcat
gatgatcaagaggatatcacatcatttgcagtcagctgtgatgatgagctgctggtgaca
gccagcagagctttgctcctgaagcagtgggactggaggcagggtacctgcactcgctcc
tggaaggctattcataccatccctgtggccagcatgacctttgaccccagctccacccta
cttgccacaggcggttgtgacgctaccataaaagtttgggatgtggttaagcagtactgc
actcacaacctcaaaggatcatccggtgtagtacacttggtccagttccaccctgacatc
agccgactgcagctgttctcctcatctgtggactgcggcattcggctgtgggacctgcgc
tccagccagtgtgtgtgtgtcctggacagccactacagtgccgtcacctctctgagcttc
agcaaagacggtgacaccatgatcagttctgggagggataaaatctgtactgtttgggac
ctcaaatctcgccaggctaaaagaactgttcctgtttacgagactgttgagggagttgtg
ctgctgcctgagaagacagacttatctcagatcagagtaaaaagcaaaaccttgcatttt
gtcactgctggaagcaaaggtgtgctgagagtgtgggaggcaagcactgctcgctgtgtt
tatacccagagccttccctcgaccctgactccttcctctgaggaagacaaagaggacgac
aaccctcgcagtttgacgtaccttttccacctgcctgcttcctccagactggccacggtc
actgcagagcacaacatactcttctaccagctgcccagtctcaccacacagcagcaattt
gtgggttacaacgacgaggtgctggacgtgaagttcctgggtaaagatgacactcacatc
gtggtggccactaacagctgtcagctgaaggtcttccagctgctcactaacagctgccag
attctctacggacacacagatactgtcctcactctggatgtgttcaaaaaaggctctctg
tttgcaagctgcgcaaaggaccggtcagtgcgtgtctggcagctggacagtgacagtggt
caggtccgatgtgtagctcagggatccagccacactaatgccgttggctccattggctgc
tccaggatgaaagcgtccttcattgtgaccggcagccaagactgcaccatgaaggtgtgg
gatctgccagccgagttttccagtgaagaaatccatcagctgagcccccgcagcacagag
aaagcacatgacaaggatgtaaacagtgtttcagtgtctcccaatgacaaactgctggcc
tccggctcgcaggaccgcacagccaaactctggtccctgtcgggggacggaaacctggga
ctcctgggtgtgtttcggggccaccggcggggcatttggagtgtgtgtttctctcccatg
gaccagatcctggcttcctcctctgcagacggcaccaccaagctgtggggcctgcaggac
ttcagctgcctcaagacatttgagggccacgacgcatcggttctgaaagtgatctttgtg
agccgtggcacccagctgctgaccagcggttcagatggtttagtgaagctgtggaccata
aagaccaatgagtgtgtgaaaacattggacgcccaccaggacaaagtgtggggtctccac
ggcagccgtaaggacgacaagatggtcacaggctcagcagactcaaacatcacagtgtgg
ctggatgtgacgaaagtggagctggaagaggaacaagccaaacaagaggaccagatactg
aagcagcaggagttgtccaacttgttgcacgagaagaaatacctgaaggccctgggtctc
gccatctcactggaccagccccacacagtgctcactgtcatcaaagccattcgtcaggtg
gaggacagcagcgatctgttggaaacgacgttgctgcggctgcgagtagatcaaaaagag
tcgctcctgcgctactgtgtcgtgtggaacaccaatgccaggaactgtctggacgcccag
gcggtcctccaggtgctgctgacccacctgccacccgaagagctgctgcagttccagggg
gcccggacgcacctggagggtctcctcccgtacacagagagacacatggagaggatcggc
cgcctgcagcaggcgtccatgtttctcaactacatgtggcagaaaatgcgagtagctgga
gcctcatctggtatggagcaggatgaagacatggacaccactcctctcacgcagatgcag
cccttgtttttcctcgataaagaaaaagcaagaggcagcaccgacgagagggaagaccaa
ggcgatgacggggatagagagcaagaagaggagtctggttttgaggtgaaagatgaagag
gaggccgaagaaatcagcgcctcgaagaaagcctctgctaacgacgcacgggagaaaaag
ggagaaaccaacgggcgccacaagtcagagagcgaggagagctcagaggaggaagaggag
gacgatcatataatgcaagtgatgcgaaatctcccgatttcatctgctccccgactccag
actttaagctaa
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