Xiphophorus couchianus (Monterrey platyfish): 114160336
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Entry
114160336 CDS
T05908
Name
(RefSeq) tetratricopeptide repeat protein 30A-like isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114160336
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
114160336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_1
TPR_12
ANAPC3
TPR_14
TPR_CcmH_CycH
TPR_16
TPR_Slam
TPR_6
ARM_TT21_C
ARM_TT21_2nd
TPR_EMC2
DUF285
ComFB
Motif
Other DBs
NCBI-GeneID:
114160336
NCBI-ProteinID:
XP_027898691
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Position
16:complement(1439241..1452602)
Genome browser
AA seq
664 aa
AA seq
DB search
MAAIKDGEYTATIYTLIKDGQYVEAIHILNGQLQKHTKSRAALSLLGFCYYHIQDFSSAA
ECYEQLTQLHPEVEEYKLYYAQSLYKAGAYSEATKASFVLDNPSSHTKMVKLQACIKFCE
EDYSGAKLLLQQLPQDDPDYVYNMGCLLYQDGKYEEASKKFMTAMQMLGYVPALSYNIAL
TYYSMKNYPQAVKYITEIIDRGMREHPELDVGVKTEGFDVHSVGNTLVLHQSALIEAFNL
KAAIEYQMKNGKAAQEALTDMPPRSEEELDPVTLHNQALVNMELKPSEGFEKMAFLLQQP
SFPRVTFGNLLLLYCKHEYFDLAADVLAENAHLTYKFLSPYMYEFLDALLTCQTAPEEAF
RKFEEMNSKLTEQLRKLAKQVQDTRQTRDDEAQSKMLQEYDLMQEKYVVVLMAQAKIYWN
RENFQMVEKIFRKSVEFCNDDDTWKLNVAHVLFMQNKYKEAISFYEPIVKKHYDSVEHCS
IQECPCKCKPSILNVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVF
HLCIVNLVIGTLYCAKGNYDFGVSRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENMSKHM
VMLRDAVVNECVQFLEHCEVYGKGVPAIIEQPLEEIHVHIGKNTVTYEARLLKALFYEVT
GWNK
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgattaaagatggggaatacacggcgaccatctacacactgattaaagacgga
caatatgtggaggcaattcacatacttaacggccaacttcagaaacacaccaagtccaga
gcggcgctgtccctgctggggttctgctactaccacatccaggacttcagcagcgccgca
gagtgctacgagcagctcacccagctgcacccggaggtggaggagtacaagctgtactac
gcccagtcgctgtacaaagccggagcttactctgaggccaccaaggcctcgtttgttctg
gacaaccccagcagccacaccaagatggtgaagctccaggcatgtatcaaattttgtgag
gaggattattctggtgccaagttgctcctgcagcagctgccgcaggacgacccggactac
gtctacaacatgggctgcttgctctatcaggacggcaagtatgaggaggccagcaagaag
ttcatgacagccatgcagatgttgggatacgtcccagcgttgtcctacaacatcgccctg
acctactacagcatgaagaactatccgcaggccgtcaaatacatcacagagatcatagac
cgaggaatgagagaacatccagagctggacgtcggggtgaaaacggaaggcttcgacgtt
cacagcgtgggaaacactctggtcctgcatcagtcggctctgatcgaagccttcaacctc
aaagcagccattgaatatcagatgaagaacgggaaagcagctcaggaggcgctgactgac
atgccgccgaggtcagaggaggagctggaccccgtgacgctgcacaaccaggccctggtg
aacatggagctgaagccttcagagggatttgagaagatggcgtttctgctgcagcagccg
tctttcccccgggtcacgttcggaaacctgctgctgctctactgcaaacacgagtacttc
gacctggcggccgacgtcctggcagaaaacgctcacctcacctacaagttcctctctccg
tacatgtacgagttcctggacgcgttactgacctgccagacggcaccagaggaggccttt
agaaagtttgaagagatgaacagcaaactaacagagcaacttcgcaaactggcaaagcag
gttcaggacaccagacaaactcgagacgacgaggcccagagcaaaatgctgcaggagtac
gacctgatgcaggagaagtacgtcgtggttctgatggcccaggcaaagatctactggaac
cgcgagaacttccagatggtggagaagattttccgaaagtcggtggagttctgcaacgac
gacgacacctggaagctgaacgtggctcacgtcctcttcatgcagaacaagtacaaggag
gccatcagcttctacgagcccatcgtcaagaagcactacgactccgtggagcactgcagc
attcaggagtgtccctgcaaatgcaaaccttcgatcctgaacgtgagcgctgtggttctg
gccaacctgtgtgtctcctacatcatgaccagccagaacgaagaggctgaagagctgatg
aggaagattgagaaggaggaagagcagatctcctacgatgatccagacaaaaaggttttc
cacctctgcatcgtcaacttggtcatcgggacgttgtactgcgccaaagggaactacgac
ttcggcgtctctcgagtcataaagagcctggagccttacaacaagaagctcgggacagac
acatggttctacgccaagcgttgtttcctctctctgctggagaacatgtccaaacacatg
gtcatgctgcgggacgccgtggttaacgagtgcgttcagttcctggagcactgcgaggtt
tatgggaagggggtgccggccatcatcgagcagccgctggaggagatccacgtccacatc
gggaaaaacacggtgacgtacgaggcgcggctgctcaaggcgctgttctacgaggtcacc
ggctggaacaaatga
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