KEGG   Xiphophorus couchianus (Monterrey platyfish): 114160407
Entry
114160407         CDS       T05908                                 
Name
(RefSeq) ataxin-2-like protein isoform X1
  KO
K23625  ataxin 2/2L
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114160407
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114160407
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 114160407
NCBI-ProteinID: XP_027898797
LinkDB
Position
2:376730..394917
AA seq 1043 aa
MLKPQQQSGSGGRKATNGTSGPGGMSSPVSGINSGGRTPAGRNRSSAKPSFQASPVFEGV
YNNARMLHFLTAVVGSTCELRVKNGSMFEGIFKTLSSRCELAVDAVHKRSEEEGSSSAPP
RSEDITDTMIFSPTDLVTMICRDVDLNYATRDTFTDTAISSSRINGEHKEKILQKWEGGD
SNGESYDLENDAVSQANGWDANEMFRYNEVKYGVTSTYDSSLSMYTVPLERGNSEVYRQR
EARAARLASEIESSPQYRHRVGLENDEGKSEEEKYSSVARDGSDREKGRESPRDRGSEKG
RDSPGASSREGKYIPLPQRQRELNRERAERGPGGPPPHSRPGGGYRPTPSSSSSPRPHLP
SAAGPQTGVSPSERSSPQSSRVGAYAAHHTPGNPSPGSGPASPYTPASPGGSAATPTSAS
TATSPSSPPNPHGHPVPHSHSHPLSLSDAGRPVNGVSAGPSPKAQRPSQPSRTNRVPNPL
SQSTATRSPKSASSQDSPFVDVSVSAQKTSGPAPLFTVDVNEILGTAAKERSAESPGSTE
DGKSSKAPSVQQRSQLEELRKFGKEFRLQPSGAGSSSPSSPAAATPPSVGEVNQSGAAKP
PSDTHAPSEPKPQPPAPSPSQTQPQHSPAPSEEPTKDATTPLGTAAATTAPIPDRQSPAT
PQPARTPGTEDARSETGERTEGVADQVKKSTLNPNAKEFNPNKTQMPMTKPNTAPTPPRP
TPPSPVVLQHPGGQGQLYNAPYLSYVSQMHPVQAPQMYQYPMSTVNQGKYPRGKVPTRPE
TSQMLQAAASVAGAPLVASPYPQSYLQYNPQQYSQQQVIQAMTYNGQPMYSMLQGGARMI
GQGSGHHPQALGPPGGPQFPAQGEGPQGPQQGIYAPQSFSHHSGAVHQPQPSSTPTGNQP
PPQHAAPSPGQNAQSGPQPQSLYHSGPLSAPTPPNMPPGHTSPQGSYPIPGYSIHSHQGL
PPAYTLSQLTQAHVQGAMPGPHHSGSHGQPQLVMLQTPQQGPGGMPQHPQHGPQQGPHQH
FYIGHPPAMQVQTHPASFHPPGN
NT seq 3132 nt   +upstreamnt  +downstreamnt
atgctgaaaccccagcagcaatccggctcaggcgggagaaaggcaactaacggaacatca
gggcccggcggtatgtcttccccagtcagcggcatcaacagcggcggccggacaccggct
ggaaggaatcgttcctctgcaaagccgtcgtttcaggcctctcctgtatttgagggtgtg
tacaacaacgccagaatgcttcacttcctcacagctgtagtgggttccacctgtgaatta
agagtgaagaatggcagcatgttcgaaggcattttcaagacactcagttctcggtgtgag
ctggctgtggacgctgtacacaaacgcagcgaggaagagggctcgtcatctgctccgcca
cgcagtgaggacattaccgacacaatgatcttcagcccaacagatctggttacaatgatc
tgcagagatgttgacctcaactacgctaccagagacaccttcacagacacggccatcagc
tccagtcgcattaacggagaacataaggagaagattctacagaaatgggagggaggagac
agcaacggagaaagctacgaccttgagaatgatgccgtaagtcaggccaatggctgggat
gcaaacgagatgtttcgctacaatgaagtaaaatatggagtcacatctacatatgattcc
agtctctccatgtataccgtcccgttggagcggggcaactccgaggtttatcggcagagg
gaggcgcgcgccgcccgcctggccagcgagatcgaatccagcccccagtaccgccatcgc
gtcggcttggaaaacgacgagggcaaatccgaggaggagaagtacagctctgtggcgcgg
gacggtagcgatcgcgagaaaggtcgcgagagccctcgagacagaggcagcgagaaaggc
agagacagtcctggagcaagcagcagagagggaaaatacattccactacctcaacgtcag
agagagttgaaccgcgagcgagccgagagaggtcccggcgggccgccaccacacagtcga
cctggcggagggtaccggcccactccttcatcctcgtcttcgccgagaccccacctcccc
tcggctgctggaccccaaaccggagtctctccctcagagagaagcagccctcagtcgagt
cgagtcggggcatacgccgcacaccatacaccgggaaatccgagtccaggttccggtccg
gcgagcccgtacacgcctgcgtctcctggtgggtcagcagccactccaacctctgcttct
acagccacgtctccatccagcccccccaaccctcacggacatcctgttcctcactcccac
tcacacccgctgtctctgtctgatgctggcaggcctgttaatggagtttctgctggaccg
tctcctaaagcccaaagaccttcacagccgagtcggacaaatcgcgttccaaacccactt
tcacagtccacagccactcgttctcctaaatcagcctcttcccaggactcgcctttcgta
gacgtctctgtgtccgcccagaagacgtctggccccgcccctctcttcactgtagatgtg
aatgagatccttggtacagctgctaaagagcgctctgcagaaagccctggcagcacagag
gacggcaaaagcagcaaagctccttcagttcagcaaaggtcacaacttgaagagctgcgg
aaattcggcaaagaattcaggctccagcccagtggagccggctccagctctcccagctct
cccgcagcagcaacgccaccttcggtcggtgaggtgaaccagtcaggtgcagccaagcct
ccgtcagacacccacgcgccctcagagcccaaacctcagcctccagctcccagtccttcc
cagacccaaccccagcattccccagctccctctgaagagcccactaaagatgccacaacg
ccactgggcaccgctgctgctaccacagctcccattccagacaggcaatcaccagcaacc
cctcagccagccaggaccccgggaacagaggatgctaggtctgagacaggagagcgtact
gagggtgtggcagatcaagtgaagaaatcaactttaaatccaaatgctaaagagttcaac
ccaaacaaaactcagatgcccatgacaaaacccaacactgcaccaaccccgcctcgtcca
actcctccaagcccagtggtcctgcagcatcctggtgggcagggacagctctacaatgct
ccctacctctcctacgtttcacagatgcaccctgtgcaggctccacaaatgtaccagtac
ccaatgtcgacagttaaccaaggaaaataccccaggggcaaagtgccgacgcgacccgaa
acatcacaaatgctgcaagctgctgcatcagtagctggagcccctctggtggcgtctccg
taccctcagtcgtaccttcagtacaacccgcagcagtacagccagcagcaggtcatccag
gccatgacatacaatggacagcccatgtactccatgctgcagggcggagcgaggatgata
ggtcagggcagcggccaccacccccaggccctcggcccgcccggagggcctcagttccct
gcacagggagaggggccccaggggccgcagcagggcatctatgcgccgcagtccttctcc
catcactcgggcgccgtccatcagccgcagccttccagcaccccgaccggcaaccagccg
cccccgcagcacgctgctcccagccctgggcagaacgcccagtccggcccgcagcctcag
tccttgtaccactcaggtccgctttcggctcccactccgcccaacatgccgccgggccac
acctccccacagggctcctaccccattccggggtacagcatccacagccaccagggcctc
ccgcctgcctacactctgagccagctgactcaggctcacgttcaaggagcgatgccggga
cctcaccactcaggcagccacggccagccgcagctagtaatgctgcagacgcctcagcag
ggaccaggcggcatgccgcagcacccgcagcacgggccgcagcaaggaccgcaccagcac
ttttacataggacacccaccagcgatgcaggtacaaacacaccctgcctccttccatcca
cctggaaactaa

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