Xiphophorus couchianus (Monterrey platyfish): 114160486
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Entry
114160486 CDS
T05908
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114160486 (apex2)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
114160486 (apex2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
114160486 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Exo_endo_phos2
Motif
Other DBs
NCBI-GeneID:
114160486
NCBI-ProteinID:
XP_027899275
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Position
1:24154056..24160321
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AA seq
562 aa
AA seq
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MKLVTWNINGIRTFKSGIKMALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCRDSATPSAAEEGLTGLLTNHEGAVGCYGDHRDFSSEELQLLDNEGRAV
ITQHKIMGQDTEQTVTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLKGGSHVIVL
GDVNTSHQQIDHCDPRDIEDFAENPGRKWLNSFLYNSVQEEEEEEHHKKSETTDCVQMGK
FIDIFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADHRLAQEQFSGADIMPEVEGS
DHCPVWAHLKCSLLPCSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSKEALPGSQEEEE
KRENMNPFCGDSKKRSSVSESAAPKGKKSKTTNTPSKPQGNLLSFFKPKLTDLKPCENTP
GLDQFTSSHSKPKASATGELRSGTGGTTEHTELVVDAPSQLCTSSAAGETGSAVKAKQPA
SGLPEGQSDVKKGASSVFWKSVLHGPPPAPCCKVHREPCVLRTVRKDGPNMGKHFFVCGR
PQGHTSNPEARCNFFMWVEKGK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcacctggaatattaacggcatcaggacgtttaaaagcgggataaaaatg
gctcttgatagcctggacgcagatataatttgtgttcaggagacaaaagtcacaagagac
ctgctggatgaacggacggctattgttgacggctacaactcgtatttcagctacagtcga
ggacgcagcggttattcaggtgttgcgacttactgcagggatagtgccactccttctgct
gctgaagagggactcacaggcctgcttaccaaccatgaaggagctgttggatgctatggt
gaccaccgtgacttttcaagtgaagagctgcagcttttggacaatgaggggcgagccgtc
atcacgcagcacaaaataatgggtcaagacacagagcagactgttaccgtaataaatgtc
tactgcccacgcgctgacccagacaagccggagcgaaagcagttcaagctgcagttctac
aagctgctacagtgtcgggccgaagcgttattaaaaggcgggagccatgtcatcgtttta
ggagatgtgaatacttctcatcagcagatagatcactgtgacccaagagatattgaggat
tttgctgagaatcctgggaggaaatggctgaatagctttttgtacaatagcgtccaagaa
gaggaagaggaggaacatcataaaaaatcagagacaacagattgtgtccaaatgggaaaa
tttatagacatcttccgttactttcacccaactcgtaccaacgccttcacctgctggtcc
actctcactggagcccgacagactaactacggcactcgtattgattatatatttgcggac
caccggctggcccaggagcagttttcgggggcagacattatgccggaggttgagggctcc
gatcactgtcccgtttgggcgcacctgaaatgttcgcttcttccctgctccaaacctcct
cccctctgcactcgctacctgcctgagtttgccggcaagcagcagaaactctctcgcttc
ctggtgaaggtggaccagaagtcgaaggaagctttacctggatcccaggaagaggaggaa
aagagggagaacatgaacccgttttgtggcgatagtaaaaaacgatcatcggtgtcagaa
tctgctgccccaaaggggaaaaagtcaaagacaacaaataccccctcaaagccgcagggt
aacctcctttcttttttcaaacccaaactcacagatcttaaaccatgtgaaaacacacct
ggtctggaccaatttacctcatcgcacagcaagccaaaggcatccgcaaccggtgagctg
cgttcaggaacgggcggcacgaccgaacacactgagcttgttgttgacgctccgtcccag
ctgtgcaccagcagcgccgcaggagaaacaggcagcgcggtgaaggccaaacagccggcc
tctggcctccctgaggggcaatcggatgtcaagaagggggcatcatctgtgttttggaag
tctgtgcttcacgggccgcccccggccccctgctgcaaggtgcacagggagccctgtgtg
ctccgtactgtgagaaaagacggcccaaacatgggcaaacatttctttgtgtgtggacgg
cctcagggacacacttccaaccctgaggcgcgctgcaacttcttcatgtgggtagaaaaa
ggaaaataa
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