Xiphophorus couchianus (Monterrey platyfish): 114160531
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Entry
114160531 CDS
T05908
Symbol
slc27a1
Name
(RefSeq) long-chain fatty acid transport protein 1
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03320
PPAR signaling pathway
xco04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
114160531 (slc27a1)
09158 Development and regeneration
04382 Cornified envelope formation
114160531 (slc27a1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xco01004
]
114160531 (slc27a1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114160531 (slc27a1)
Lipid biosynthesis proteins [BR:
xco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
114160531 (slc27a1)
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
114160531 (slc27a1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
114160531
NCBI-ProteinID:
XP_027898974
UniProt:
A0A3B5LYL1
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Position
16:complement(9716399..9726116)
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AA seq
648 aa
AA seq
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MHNAASVSASLGSLGLLRLVGVSWSWSLAAGLGVYLGTKSWKYFYIAARTAKRDVNGLYV
LLRVKLALWRYMRNGSSILSIFAQTVKRHPNKPALIYEATGETWTFTQLDEISNAVAHWA
RGQGWVSGDVVALFLESRPLHVALWLGLAKIGVEAALINFSLRCDPLLHCIGVSGSRAIV
FGAELADAMLEINSSISQSIVRFCTGDLSVERLTALNARPLDPVLATASRHPPSPCVPPK
GMNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYFAFRMHPDDVIYDCLPLYHSAGNI
IGIGQCLIHGLTVVVKRKFSASRFWEDCIKYNCTVVQYIGEICRYLLSQPVRPSEKGHRV
RLAVGNGLRPSVWEAFTERFGVGQIGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLVKVNEETMELIRDSRGLCVPCSPGEPGLLVGRINQKDPLRRFDGYANQDATKKKIVQ
NVFRKNDSAYLSGDVLMMDELGYMYFRDRSGDTFRWRGENVSTTEVEGILSNVLDQTDVA
VYGVAVPGVEGKAGMAAIADATGKFDCDSFLQKIQRSLPTYARPVFLRISPQVDTTGTFK
IQKTRLQREGFDPRLTTDQIYFLNSRAARYVPVDEELYNSIAEGRMSL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatgcagcgagtgtgtcagcctctctgggttctttgggactgctgcgtctggtt
ggggtgtcctggtcctggagtctggcagcaggcctaggagtatatctaggcaccaaaagc
tggaaatacttctacattgcagcacgtactgcaaagagagacgtcaatggcctctatgtg
ctgctgagggtgaagctggctttgtggcgctacatgcgcaatggaagcagtattctttcc
atcttcgcccagactgtgaaacgacacccaaataaaccagcactgatctatgaagccaca
ggggaaacgtggaccttcacccagctggatgagatctctaatgctgtagctcattgggca
agaggtcaaggatgggtctctggggatgtggtggccctcttcttggaaagcaggccgtta
catgtggcgttgtggcttggcttggcaaaaattggggtggaagctgctcttattaacttc
agcctccgctgtgatcctcttctgcactgcattggggtatcagggtcacgggccatagtg
ttcggagctgagctggctgatgccatgttggagatcaattcatccatcagccagtccata
gtgcgcttttgtacaggggacctcagcgtagaacgtctgacggctctgaacgctcgacct
ctggacccagttttagccactgcatcaagacacccaccttcaccttgtgttcccccaaaa
ggcatgaatgaccgcctgttttatatttacacctctggaaccacaggactccccaaagct
gccattgtggtccacagtcgctactacagaatagctgcctttgggtactttgcctttcgc
atgcatcctgatgatgtcatctatgactgcctgcccctgtatcactctgcaggtaacatc
atcggcattggtcagtgtcttatccatggtctcactgtggtagtgaaaaggaaattctct
gccagtcgcttctgggaagattgcattaagtacaactgcactgtggtacagtatattggg
gaaatctgccggtacctcctgtcacagccggtccggccatccgagaagggccacagagtt
cgcctggcagtggggaatggacttcgccccagtgtgtgggaagccttcacagagcgattt
ggggtggggcagatcggggagttttatggagcaactgagtgcaactgcagcattgccaac
atggatggcaaggtgggagcctgtggatttaacagtcgcattctgcccaacgtgtacccc
atccggctggtgaaggttaatgaggaaaccatggagcttattcgggacagccgtggtctc
tgtgtcccttgcagccctggggaaccagggcttctggtaggtcgtataaaccagaaggat
ccattacggcgctttgacggctatgccaaccaagatgctacaaagaagaagattgttcaa
aatgtcttcaggaaaaatgattctgcatatttatcaggagacgtactgatgatggatgaa
ctgggctacatgtatttccgtgaccggagtggggacaccttccgctggcgaggagaaaat
gtctccaccactgaggtggagggcatactcagcaatgttctggatcaaaccgatgtggct
gtgtatggagtagcagtgccaggtgtggaaggtaaagcaggcatggctgccatcgcagat
gctacagggaagtttgactgcgatagtttcttgcagaagattcagcgatcacttcctact
tatgcccgcccagtgttcctgcgaatctccccacaggtagacaccacaggtacatttaaa
atccaaaagaccagactccagagagagggatttgacccacggctgacaactgaccagatc
tactttttgaacagtcgagctgcccgttacgttccagtggacgaggagctttacaactcc
atagcggagggaagaatgtctctatga
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