Xiphophorus couchianus (Monterrey platyfish): 114160645
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Entry
114160645 CDS
T05908
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114160645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114160645
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
NGL family
114160645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_9
LRR_14
V-set
Ig_2
LRRNT
DUF7617
Ig_6
Big_6
Motif
Other DBs
NCBI-GeneID:
114160645
NCBI-ProteinID:
XP_027899115
LinkDB
All DBs
Position
2:complement(1506398..1515857)
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AA seq
737 aa
AA seq
DB search
MRLVMVTSPCTLSPLLWLVQLLLWFHHHGPQLTEAAPPCPNPCTCSNQASRVICTRKSLD
QIPDSISENTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPTQAFEYLSKLRELWLRNNPIETLPAFAFNRVPSLRRLDLGELRKLGFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVRLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVTIIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPSNTTCCARCHAPPGLKGKYIGELDQTHFVCYAPVIVEPPTDLNVTEG
MAAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTATAVLNVSASDPSNSYSYFTTVTVESVEPSKEENSARQYVNETFVGSPKPPG
HGGVDGLSSSTISPSLSTLSPLSPRTTENSVTVSLMDVTNIPGLDDVMKTTKIIIGCFVA
ITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIVNVEDEIGAGAGSGISGGSTINSGTGT
EGTLRIHHPEVVNLPNIGRTDTLNHYYKTHHFNNNVMGLSITEGMGPGGILNSKNQHGQD
NPISCTSVPISTSNLLSASGNGTNTSSMSPPLPMSLPMPTMGLHGSIKGFMGQNQNPQME
PLLFKGSSKENVQETQI
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttgtcatggtgaccagcccctgcaccctatcccccctcctctggttggtccag
ctcctgttgtggtttcaccaccatggaccccagctgacagaggcggcaccgccatgtccc
aacccctgcacctgctccaaccaggcgagccgggtcatctgtacaaggaagagtttggat
caaatcccagacagcatttcagaaaacacaagatacctcaatctacaagagaactcaatt
caggtgatcaagtctgacacattcaagcatctgcggcatctggaaattctccagctctct
aagaaccacatccggcagattgaggtgggagctttcaatggcctccccaacctcaacacg
ttggagctttttgacaaccgtcttacagtggtaccaactcaagcttttgagtacctcagc
aaactaagagaactatggctacgaaacaaccccattgagacactgccagcctttgctttt
aaccgcgttccctcattaagacgtctggatctgggggaactcaggaagttgggtttcatc
tcagaggctgccttcgaaggtctggtaaatctgcgttttttgaatcttggcatgtgcggc
ttgaaggacatccctaaccttaccccgcttgtacgacttgaggagttggagttatcaggg
aatcagctggggattgtccgtcctggatcatttcagggactggtgtcacttcgaaagctt
tggctgatgcactccagagtgactatcattgaacgcaatgcttttgacgacctcaagaac
ttggaggagctcaacctttcccacaattctctgcattctctgccccatgatctgttcacc
cctttgcaccagttggagagggtacacctcaaccataatccttgggtttgcaactgtgac
gtcctgtggctcagctggtggcttaaagagacagttcccagcaacaccacgtgttgtgct
cgttgccatgccccgccaggcctgaaagggaagtacattggggaactggatcagacccac
tttgtctgctatgctccagtgattgtggagccgcccactgatctgaatgtcaccgaagga
atggccgcagagctgaaatgccgtaccggaacctctatgacctctgtgaactggttcacc
ccaaacggcacgctgatgacacacggatcataccgagttaggatctcagtgcttcatgac
ggaacactgaacttcacaaatgtgaccgtgcaggacaccgggcagtatacctgcatggta
accaactccgctgggaataccactgcaaccgctgtgctcaacgtctctgcttctgatcct
agtaacagctacagctatttcaccactgtcacagttgagtcagtggagccaagtaaggag
gagaactcagcaagacagtatgtgaatgagacctttgttggttcccccaagcctcctggt
catggaggggtagacggtctatctagcagcactatatcaccatctctgtctactctgtca
ccactgtcacccagaactactgaaaattcagtgactgtgtctctaatggatgtaactaac
attccaggcctggatgatgtaatgaaaacaactaagatcatcattggttgcttcgtcgcc
attacttttatggcagctgtgatgctggtggtcttctacaaactccgtaagcaacaccaa
ctacacaaacaccacggccctgccagagcaattgagattgtcaacgttgaagatgaaatt
ggagctggggctggaagtggcatctctggcggttcgacgataaattctgggactggtaca
gagggaaccttgagaatacatcacccggaagtagtcaaccttcccaacattggtcgcacg
gataccctaaaccattactacaagacacatcatttcaacaacaatgtgatgggtctcagt
atcaccgaggggatgggaccaggtggaatcctcaacagcaagaaccagcatggccaggac
aaccctatctcctgcacatcagtcccaatctctacatcaaatttgctctctgcatcaggc
aacggcaccaacaccagctccatgtccccaccgctgccgatgtctctccccatgccaact
atgggcttacatggatcgatcaagggtttcatgggccaaaaccagaacccccaaatggag
ccgctgctcttcaaggggagctccaaggaaaacgtccaagagacccagatctaa
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