Xiphophorus couchianus (Monterrey platyfish): 114160791
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Entry
114160791 CDS
T05908
Symbol
dhx57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
xco03012
]
114160791 (dhx57)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114160791 (dhx57)
Translation factors [BR:
xco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114160791 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
HA2_C
DEAD
HA2_N
zf-CCCH_4
AAA_22
zf_CCCH_4
zf-CCCH
nSTAND3
NB-ARC
AAA_19
Torus
NPHP3_N
AAA_14
Viral_helicase1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
114160791
NCBI-ProteinID:
XP_027899387
LinkDB
All DBs
Position
17:complement(12335634..12346832)
Genome browser
AA seq
1426 aa
AA seq
DB search
MNAKRRGGKPNRGGGRFNKPRGGGGGGGGSRKGGGAFRWDDDDDDFSLDFGPSRSSRPGK
GRGGIGGAGGGGRGRGRDAGRGRGFNDRRRDSKGDRKPLPRSLVSTRVPLKAGDGSRPEA
SSMPLQRIFMTNENQEQLKELLRELQTQDFDEPYDRESGSDYSQEEGEEYDELDPREEGQ
FWVTNDEPVERDESPAYYPEEEEEEEEDKERPTPEPVISLFAVGKLCRYGLDRERSKQAL
ESGGGEFGSTLEHLLLQVFSERYGQKAVSPDGLQGVPMDECLSQRQEEALALAAIFGDRF
YERIANAVWTVSLDVPFLSDKPARNGVDAAGKNSRNVCKFYLKDRGCRFGDKCRFRHELP
GREKSGAGSLDPKGPSQPGFTSYSPPEYELEVRFPKGNRYPHQAPIVAFSTNDESVAAAG
RLGVTEKLFGEALAAAKSGEPVVYTLITLCEDELSMKELLAIGHHKYSTPPPVVAPQPNP
LGIAKSRTSSTNSRRAAPPATQKPEIKATGKAEEPEEEAEVEVEVEAVPVEAESYVNLRK
KMESKHSQKTENLLQENGKLCRDFQRKRSSRRFKSMLEQRRNLPAWQEKENILDELDSCQ
VLVISGMTGCGKTTQIPQFILDASLAGPAGQVANIICTQPRRISAISVAQRVAQERAECL
GNSVGYQIRLESVRTSATRLLYCTTGVLLRRLEGDADLRGVSHVIVDEVHERTEESDFLL
LVLKDLITKRQDLKIILMSATLNANLFSEYFYDCPTIHIPGRTFPVDQFFLEDAVAKTGY
VIEDGSPYLRSGKQNSSSASSQRVTRDTVDDLGDDVWNFMSFCKKDFVKDSTPDQQLSLQ
ELTIRYKDTKKSVLKTIAAMDLDKINMDLVESLLEWIVDGQHNYPPGAVLVFMPGLAEIK
MLYEQLQSNRIFNNRRTNRCVVYPLHSTLSNEEQQAVFSRPPEGVTKIIISTNIAETSVT
IDDVVYVVDSGKMKEKRYDASKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHC
FRHQLAEQQLPEIQRVPLEQLCLRIKILDLFAEQQLESVFSRLIEPPAEGSQDAARQRLQ
DLGALTPDEKLTPLGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAFKSPFVSPW
DKREEASEKKLGFAVANSDHLALLQAYKGWCCAAKSGNQASFRYCRENFLSWRSLQEIAS
LKRQFAELLSDIGFIKEGLRARVIERLSSQGADGVLEATGPEANLNSENIRLMSAMLCAA
LYPNVVQVRAPQGNYKMTSKGAMKMQPKANELRFMTKSDGCVHIHPSSVNYTVRHYGSPY
LVYHEKVKTSRVFIRDCSMVSVYPLVLFGGGQVNVELHKGEFVISLDDGWIRFAAASHQV
AELVKELRWELDQLLEDKIRNPSMDLCSCPRGSRIIRMIVHLITTQ
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaagagaagaggagggaagccaaacagaggaggagggaggtttaacaagccc
agaggaggcggaggtggcggaggtggaagccggaagggaggaggagcctttcgctgggat
gacgacgatgatgatttcagtcttgattttggaccctctcgctccagcagacctggcaaa
ggacgaggcggcatcggtggtgccggcggtggcgggcgtggaagggggagagatgcggga
cgaggacggggatttaatgatcgccgaagggactcgaagggcgacaggaagcccctcccc
aggtcccttgtgagcaccagggtccctctgaaagcaggcgacggcagcaggcccgaggcg
agcagcatgcccttgcagaggatcttcatgaccaatgagaaccaagagcagctcaaggag
ttgctgcgggagctgcagacgcaggattttgacgagccttatgacagggagtctggctct
gattattcacaagaagagggggaggaatatgatgagttggatcctcgtgaggaaggtcag
ttttgggtcactaacgatgagcctgtggagcgagatgagagccctgcttattacccagag
gaggaagaggaagaggaggaagacaaggagcggcccacacctgaacccgttatctcctta
tttgctgttgggaagctctgcagatatggtttggacagggagagaagcaaacaggctctg
gagtccggcggaggagaattcgggtcgactttagagcatctcctcctccaggtcttcagc
gaacgctatggacagaaagcggtttcccccgatggcctccagggggtgccgatggacgaa
tgcctgagccagcgtcaggaggaagccctagcgttggctgccatttttggcgaccgtttc
tacgagcgcatcgccaacgccgtgtggacggtgtctctggacgtccccttcctctctgac
aaaccggcccgaaacggagtcgatgccgcgggcaaaaacagccgcaacgtttgtaaattc
tacctcaaagaccgcggctgccgcttcggcgacaaatgccggttcagacacgagcttccg
ggtagagagaagtccggggcgggttccttggacccaaaagggccaagccagcccggcttc
accagctactctcctcctgagtatgagctggaggtccgcttcccaaagggaaaccgttac
cctcaccaggcgccgatagttgccttcagcaccaacgacgagtcggtagcagccgcgggg
agactcggtgtcaccgagaagctgtttggagaagcactagctgcggcgaagagcggcgag
cccgtcgtttacaccctgatcaccctctgcgaggacgagctcagtatgaaggagcttctg
gccatcgggcatcacaagtacagcacgccgcctcctgtggtggcaccacaaccgaatcct
cttggcatcgcaaagagcagaaccagcagcacgaacagcaggagggccgctccaccagca
acccagaaaccagaaataaaagcgactgggaaggctgaggagccggaggaggaggcagag
gtagaggtggaggtggaagccgtcccagtggaggctgagagctacgtcaacctgaggaag
aagatggagagcaagcacagtcagaaaactgagaacctcctgcaagaaaacggcaagctg
tgtcgagacttccagagaaaacggtcttcccggcgctttaagtctatgctggagcagagg
aggaacctcccggcttggcaggagaaagagaacatcctggatgagttggacagctgtcag
gttctggtgatcagcgggatgaccgggtgtggtaagaccactcagattcctcagttcatc
ctggacgcctctctggccggtcccgccggacaggtggccaacatcatctgcacccagcct
cggcggatttctgccatctctgtggctcagagagttgcacaggagcgggccgagtgtctg
gggaactcggtgggctaccagatccgcctggagagcgtcaggacgtcggccacccggctg
ctgtactgcaccacaggcgttctgctcagaagactggagggcgacgcagacctcagagga
gtctcgcacgttattgtggatgaagtgcatgagcggacagaggagagcgacttcctgctg
ttggtgcttaaggaccttattacaaagaggcaagacctgaagattattctaatgagtgcc
acgctcaatgccaacctcttctctgagtatttctacgactgtcctactatccatataccc
ggtcgtacatttcctgttgatcagtttttccttgaagatgctgttgctaaaactggctac
gtcatagaagacggcagcccttacttgcgctcaggaaagcagaactcgtcttccgcaagc
agccaaagagttacgagggacacggtggacgacttgggcgacgacgtgtggaacttcatg
tctttctgcaagaaagattttgtcaaagactcgaccccagaccagcagctcagcctgcag
gagctcaccattagatacaaagacacaaagaaatctgtccttaaaactattgctgccatg
gacctggacaagatcaacatggacttggtggagagcctgctggagtggatagtggatgga
caacacaactacccaccaggtgctgtgttggtgtttatgccaggccttgctgagattaaa
atgctttatgagcagctgcagtccaacagaatattcaacaacagacgcaccaacagatgc
gtggtctaccccctccactccaccctgtccaacgaggagcagcaggcagtcttcagccgc
ccccccgagggcgtcaccaagatcatcatctccaccaatatcgcggagacctcggtaacc
atcgacgacgtggtttatgtcgtcgactctggaaagatgaaggaaaagaggtacgatgct
tccaagagcatggagagcctggaggactcgtgggtgtcccgggccaacgcgctgcagagg
aaaggtcgagcgggccgagtggcctcgggggtttgcttccacctcttcaccagccactgc
ttccgccatcagctggccgagcagcagctgcccgagatccagagagttcccctggagcag
ctctgcctgcgaattaagatcctggacttgttcgccgagcagcagctggagtccgtcttc
tctcggctcatcgagccgccagccgaggggagccaggacgccgccaggcagcgcctccag
gacctgggagctctgaccccggatgagaagctgaccccactgggctaccacctggcctgc
ctgcccgtcgacgtgcgcatcgggaaactcatgctgttcggcgccatcttccgctgcctc
gacccggcgctcaccatcgcagccagtctggcctttaaatcaccgtttgtgtcaccatgg
gataagagagaggaagccagtgagaagaaacttggctttgctgtggccaacagtgaccat
ctggctttgttacaggcatacaagggttggtgctgcgctgcaaagagcggtaaccaggcc
agcttccgctactgtagggagaacttcctgtcctggcgcagtttgcaggaaatcgccagc
ctgaagaggcagtttgcagagctgctgtcagacatcggcttcattaaggagggattgagg
gctagggttattgaacgcttatcctcacagggagcggatggtgttttggaggctactggg
cctgaggccaaccttaactcagaaaacatccgcctgatgtctgcaatgctgtgcgcagct
ctctatccaaatgtggtgcaggttcgagctccgcaggggaattacaagatgaccagcaag
ggagccatgaagatgcaaccgaaggccaacgagctgcgcttcatgaccaagagcgacggc
tgcgtccacatccacccctcgtccgtcaactacacagtgcgtcattatggcagtccctac
ctggtttaccacgagaaggtgaagacgagccgcgtcttcatcagagactgcagcatggtg
tccgtctacccgctggtgctgttcggaggcggtcaggtcaacgtggagctccacaaaggg
gagtttgtcatctctctggatgacggctggatccggttcgcagcagcgtcgcatcaggtg
gctgagctggtgaaggagctgcgctgggagctggaccagctgctggaagacaaaatcagg
aacccgagcatggacctgtgcagctgcccccgaggttcccgcatcatccgcatgatcgtc
cacctcataaccacccagtaa
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integrated database retrieval system
