Xiphophorus couchianus (Monterrey platyfish): 114160798
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Entry
114160798 CDS
T05908
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114160798 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114160798 (arid2)
03021 Transcription machinery [BR:
xco03021
]
114160798 (arid2)
03036 Chromosome and associated proteins [BR:
xco03036
]
114160798 (arid2)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
ARID
114160798 (arid2)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114160798 (arid2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
114160798 (arid2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
114160798
NCBI-ProteinID:
XP_027899400
LinkDB
All DBs
Position
17:complement(14821636..14854286)
Genome browser
AA seq
1667 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGKELDLNALYIRVVSLGGF
AKVSDKNQWAELGEEFNFPRSCSNAAFALRQYYLRYLEKYEKVHHFGEDDEEAQPGNPKA
FLPVGAIPSSYNYQQHVVSDYLRQSYGLSTDFTQPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHTGVFDDSLGNFSTVFGTDWKEKTSRDFVRFWKEV
VEDTEVRELIWDKSSSAQDGTFREDHWQSLFHPPRNPGTSDMEAQRVMQVAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLMSRDRFLKMRAMEILGNLSKADDNGVLICEYVDQESYREVIMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIASVDHSIDLLVRLVSVDLHTFGPDALTAVRLIEHQANAEQAAE
VRPQLVEQVPAAVQGATAPVTRVPVQSNVPPPGIVELDGEKFTLQWLNAHFETNPEGSVS
RSEMYSEYLATCSKMGRGNILNSTGFLKCLRTVFPNHTMRRQDEAKASNPLQILLVGIRR
RAIPLPIQLYYQQTQQQHQNPAAAPPPPVARHEAPGDPQAPPPGLPPGHPNPGPQFVRSL
GVSNSAPPMASPAQESSRVNHPAVPRHPGPPQASPQLPPTLVRTAPGVQITTSAAAAQNH
SPQNPAPPPVPQQQHSPMLPTGAPVTLFQPVPQGHILTARVQGVCSQVTQQPPLPQTLPV
SGPQGGAPQVDAQCTATVSGPPSIQVGGSQAVGIMGVANSQGSRVTFQNIAPKPAPNQSG
GPTATLAPPNQQPQSQQSVVIVSPNPQQNAAYTPAIHQIVLANPSSIPGAQTVQIAGQPG
AASSPCSPAASHSNTQVQSNQAVSHALSTIRQQQQQPLPPLQIISQTPPTQPTSTESSLI
KQLLLPKRGPSTPGGKLILPAPQVPLPNNTIAPNPQVIYQNPSPQPVSVQLVPGQLPAAG
APPLQAVQLLPGQLISTSTPGGAAIIQAPTAAGQVTFTVVPNTGFTTSAAAVAAVSQGAV
APGVPPPPFSTGTVPHHVSTGAPLPPPLPAPLRGDKIICQKEEEAKDATGLHIHERKIEV
MENSSLAEGDPSNNKTRNGDVAAGAKLLNGGKCVEPNLPPYHSGNSQGVLNGPVTESLSS
NGKQALSPGPNAPLEGNADPKKTLVNGVCDFERGDSGGNFNKNIPNHIASKQYLGNGEVG
ASEKTSDQSLPSPPPPQQDTAKAQQAERLANGPQAAAHRPPSELTNGPLGPALGHGTPVL
RQQLLPNSSLPCAVTSQNPAASPANGVASEPRGLKRPAENDERGPTAVATSSGIPSKVGV
RIITISDPNNAGSSATMVAVPAGTDPSTVAKVAIENATQQRNCSPTQAAGATPTATPPPA
PSSQPAAAGNHSPHLPAQQTPTSPTEPGRKAGQHFKCLWQSCKRWFETPSQVFYHAATQH
GGKEVYGGHCLWEGCEPFPRQRLSFITHLQDKHCSREALLAGLKLEEQQAQSPNQTSSQT
PPAAGSTPAQRAPKAIVNHPSAALMALRRGSRNLVFRDFTDEKEGPVTKHIRLTAALTLK
NIAKHSDCGRMLVKRHETHLSVLALSNMEVSTTLAKCLYELTRSLQA
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctcctagatcagcgaaggaaaggacaggctttcctg
gacgagctgcggcaatttcaccaaagcagaggatcgccgttcaagaagattcctatcgtg
ggtgggaaagagctggatctgaatgctctctatatcagagtcgtctctttaggtggattc
gcgaaggtgtctgacaaaaaccaatgggcagaacttggagaagagtttaactttccgagg
agttgctccaacgcagcattcgctttaagacagtactacctacgatacctggagaagtac
gagaaggtccaccacttcggcgaggacgatgaagaggctcagccggggaatcccaaagcc
ttccttccagtcggtgcaatccccagctcctacaactaccagcagcacgttgtatcagac
tatctccgccaaagttatgggctgtctacggacttcacccagccgtgcgactacaacaaa
ctggtgctctcgctgctctcgggcctacccaacgaagtggactttgccgttaacgtttgc
acgctgctctccaacgagagcaagcacgccatgcagctggacaaggaccccaagctggtc
acgttgctgctggcccacactggcgtcttcgacgactctctaggcaacttctctacggtg
tttgggacagactggaaggagaaaacctcgcgcgactttgttaggttctggaaggaggtg
gtggaggacaccgaggtcagagagctgatctgggacaagagcagctcagcacaagatggt
acgttccgggaggaccactggcagagtctcttccacccgccgcggaacccaggcaccagt
gacatggaggcccagcgggtgatgcaggtcgccgtcatcctgcgaaacctctccttcgag
gaggccaacgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttttgctctgc
gcccactgtaacctcatctcactccgacagctcgggctcgacacgctgggcaacgtggct
gctgagctccaactggatcccgtcgattttcggacgacgcacctgatctttcacaccatc
accaaatgcttgatgtccagggacaggttcctcaaaatgagagctatggagatcctgggt
aacctgagcaaagcggacgataacggcgtgttgatctgcgagtatgtggaccaggagtcg
tacagggaggtgatcatgctcctcactctgccggacctcatgctcctcatggcctccttg
gaggttctgtacctgctggcccaactgggagagattccttgcagcaagatcgcgtcggtt
gaccacagcatagacctgttggtgcggttggtgtcggtagacctccacacgtttgggccc
gacgccctgacggcagtgcggttgatcgagcaccaggccaatgccgagcaggccgccgag
gtccgaccgcagctggtggagcaggtacctgcagcggtgcagggggcgacggcaccggta
acaagagtccctgttcagtccaacgtaccaccacctggtatcgttgaactagatggggag
aagtttacgctgcagtggctgaacgcacactttgagacgaaccccgagggctcggtttca
cgatccgaaatgtactccgagtacctggctacatgcagcaaaatgggacgcggcaacatc
ttgaactccaccggcttcctaaaatgcctgcggacggtgttccctaaccacactatgagg
cggcaagacgaggcaaaagcgagcaacccgcttcagatcctcctggtgggtataaggcga
agagcgatccctctccccatccagctgtactaccagcaaacccagcagcaacaccagaac
ccggccgcagctcctccacctccagtagctcgacacgaagcacctggagatcctcaagct
ccaccaccagggttaccgccaggacatcctaatcctggaccacagttcgtgcggtcgctt
ggtgtctctaatagcgccccacccatggcctcgcccgcacaggaaagttctcgtgtaaac
cacccagctgttccccgtcaccctggtcccccacaggcgtcgccacagttacccccaacc
ctggtccgaacagctccaggggtacagatcacaacgtccgctgcggccgcccagaatcac
agcccacagaatccggcgccccctcccgtgcctcagcagcagcactctcccatgctcccc
acaggagctcccgtcacgctatttcagccagtaccacaaggccacatcctcaccgcccgg
gtacaaggtgtgtgctcccaggtcacccagcaaccacctctgcctcaaaccctccccgtc
tctgggcctcagggtggagccccccaggttgacgcccagtgtactgctacagtttcagga
cccccttccatccaggtgggaggcagccaggctgtagggataatgggcgtggccaactcc
caaggttctcgcgtaacatttcaaaatattgctcccaaaccagcaccaaaccagtcaggt
gggccaacagccacgttagcccctcccaaccagcagcctcagtctcaacagagcgtagta
atagtcagtcccaatccccagcagaatgcagcctacaccccagccatacaccagattgtt
cttgccaacccctcctccattcccggtgcccagactgtccagatagcggggcagcccgga
gctgcttccagtccctgctcacctgctgcctctcactcaaatacccaggtccagtccaat
caagctgtcagccacgcactgtccacgatacggcaacagcagcagcagccgctgcctcct
ctccaaatcatatcccaaactcctcccactcaacctacctccactgaatccagcttgatc
aaacagctactgcttccaaagcgagggccttctaccccgggagggaagttgatcctgcct
gccccacaggtcccccttccaaacaacacgatagcccccaacccacaggtcatctaccag
aacccctctcctcagccggtcagcgtccagctggtccctggccagcttcctgctgcaggt
gccccgcccctccaggcggtccagctgctgccagggcagctcatctccaccagtacgccg
ggcggagctgccatcatccaggcccccacagcagctggacaagtcacgttcaccgtggtc
cccaacactggcttcaccacctctgctgctgccgtcgccgccgtcagccagggcgctgtg
gctccaggtgtcccgccaccgccgttttctactggaacagtcccccatcacgtctcgaca
ggtgcaccgctcccaccgccactgccggctcccctcagaggagacaagattatttgtcag
aaggaggaagaggccaaggacgccacagggctgcatatccacgaaaggaagatagaggtg
atggagaactcttcgttggcagaaggagacccttcgaacaacaaaacgaggaacggggac
gtcgcagcaggtgccaagctactaaacggtgggaagtgcgtggagccgaatctacctcca
tatcactcagggaacagccagggagtactcaacggcccggtaacggagagcctctcctcc
aacgggaagcaggctctctctccaggcccaaacgcccctctcgagggcaacgccgacccc
aaaaagaccctggtcaacggggtgtgtgactttgagcggggcgatagcggtggcaacttt
aacaaaaacattccaaatcacattgcttccaaacagtacttggggaacggggaggtgggc
gcctctgaaaagacttcagatcagagtcttcccagtccgccccctccccagcaggacact
gccaaagcccagcaggccgagcgcctggccaacggaccccaggctgcagctcaccggccg
ccctcggaactaaccaacggacctctggggccggcgctggggcacggcacgcctgtgctc
agacagcaactgctccccaactcctcgctgccctgcgccgtcacttcgcagaatcccgcc
gcctctccggcgaacggcgtggcctcagagccccggggcctcaagaggcccgccgagaac
gacgagcgtggcccgacggcggtggcgacttcctccgggatccccagcaaggtgggagtt
cggatcatcaccatcagcgaccccaacaacgccggcagcagcgccaccatggtggcggtg
ccggcaggaacggacccaagcacagtagccaaagtagcaatagagaacgccactcagcag
aggaactgctcgcctacacaagcagctggcgccacgccgactgccaccccgcccccagct
ccctcctcgcagccggcagcagcaggcaaccacagtccgcacctcccagcgcagcagacc
cccacgtcgccgacggaaccgggcaggaaagcagggcagcacttcaagtgtctgtggcag
tcgtgtaaacggtggttcgaaacgccgtctcaagtgttttaccacgcagcaacgcaacac
ggaggaaaagaagtgtatggagggcattgtctgtgggagggatgtgaacctttcccccgg
cagagactgtccttcatcacacatctgcaggacaaacactgctccagagaggctttgctg
gctggactcaaactagaggagcagcaagcacaaagtcccaatcagacatcttcccagact
ccgccagcggcaggcagcactccggcacaacgagcaccgaaagcaatcgtcaatcatccg
agcgcagctctcatggccctacgtagaggttctcgaaacttggtcttcagggacttcaca
gacgagaaggagggaccggtgaccaaacacatacgactaactgctgccttaactttaaag
aacatcgccaagcactctgactgtggtcgcatgttggtaaaaaggcacgagacgcacctc
tctgtgctcgctttaagtaatatggaggtctccaccacgctcgccaaatgcctttatgaa
ctcacgcgctcgcttcaggcttaa
DBGET
integrated database retrieval system
