Xiphophorus couchianus (Monterrey platyfish): 114160862
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Entry
114160862 CDS
T05908
Symbol
stab2
Name
(RefSeq) stabilin-2 isoform X1
KO
K19013
stabilin-2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114160862 (stab2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114160862 (stab2)
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Cell surface receptors
114160862 (stab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fasciclin
EGF_3
Xlink
EGF_STAB1-2
cEGF
EGF_MSP1_1
EGF_TEN
EGF_Teneurin
EGF_laminin
FXa_inhibition
EGF
Motif
Other DBs
NCBI-GeneID:
114160862
NCBI-ProteinID:
XP_027899534
LinkDB
All DBs
Position
17:177692..207186
Genome browser
AA seq
2564 aa
AA seq
DB search
MEVLLSFQLLVLMMTAVASQQNFCSNSTVLRTQTACHSCSISMFVQCPTGFRRSPESLAS
GCKYQIRTSSLQLAVRGCSFQCFQQVEMKSCCPGYWGPDCTECPDGADRPCSGRGVCSDG
LGGNGTCSCQVGFVGTVCEDCSPGRYGPTCSSECSCVHGLCGSGLKGDGRCTCFSGYRGP
RCDQELPECAALSCQQNSRCMEEALTGRLVCQCLPGYEKSGSQCLAKNPCLRPVCHSLAS
CAHTGPDQHHCTCNEGYSGDGQVCMPIDPCQTQNGRCSARTTRCIYDGPGKSHCECLPGF
ETLADGSCNLKDVCKPDSCHQNANCSTVGPGRVRCACLQGYIGNGKVCFGNIMERLRELN
TQPGKEWSGQLSNAISLFDSLSWPLQNLGPFTVFVPVNRGFKGTSIQTLTADSSKAKYLC
KMHLVAGSMPSSTLMKTDVFYTLSGKAGETEMSGRGGQIRIRIHGSRKRGEVIKSDLAAS
NGLVHIITKLMDSVPATVESRPDENLMKIISDYGKLETFKSLLEQAELASVMDLPQPVTV
FTPTTEAFNSMKEGHLQFLRSTEGRSKLTEFLRNHIVPSTSLEVYNIVSSPTIVTMANQV
LIINVTENGQILVNGAAVLEAAVEAKNGRLYVMNGVLTPPSIQPLLPHRCDITETKIIKG
ECVSCAKVHLFQCSSGVYTDTSYSGCLYNLFSDESPIKVPFRGCTPLCTANVTTPACCKG
FYGPDCSPCPGGFNTPCSGRGQCVEGIRGNGSCICEPNFRGSRCQYCSSFNKYGPNCDRT
CPCVHGQCDNRPDSDGRCKLDSCLRGFTGRFCERQTSVCGGLAQFCHAHADCDFTDGSPR
CVCKAGFQGDGITCVESDPCAPPLRGGCSVNAKCIKTGPGTHTCQCLTGWTEDGNECQPI
NNCDGPDGGGCHPNASCIYVGPGQSDCACKAGYMGNGHTCEAVNQCVTANGGCHFRASCL
LLSSQWTCVCDDGYAGDGLLCYGTVDQELMVLQNASDFFRWTMDSGLSHSLSDQNLTLLV
PTSAAVAQMSPMDRSFWTMKGNLPSLIRNHVLPGVFSSSTLRNISSVTSLLTSSLPVSTS
QEITSVGGATVIASDSAATNGLIHLINKVLVPDKKLSEGLLAVLALRPEFSLFRSYLIEY
NLTKEIERAEEFTVFAPTDSAITQYLQQVAAPALDSNMTRYHVVLAERLLKTDLQPGGYR
ETLLGFPFQIGIYPRDGKLFVNDAQINSSNLLCGKGVIHGLSAVLHINRNRCDKLTYSKV
KGSCGNCLLPKTQKCPSGTDHDKSVRMRSCLYRHTIEGESHMTIGCIATCLRKNIERRCC
EGFFGEHCEPCPGPKGQACFGNGLCSDGVNGTGVCKCNKDFHGTACESCQSGKYGVHCDQ
DCRCKNGLCNEGLNGDGTCECDVGWRGVRCDEKIESKADELCGSVKCHSSANCAVQTSGS
QCLCAAGFEGNGTFCKAVDPCLVKNGGCSLSGVCKRTRPGSRDCVCGRGYAGDGFVCVEI
NPCLEGNGGCHAKAECIHVGPNKTLCVCSKGYSGDGQNCTIVNLCAKKNGGCHHFAQCNM
TGPGIRTCTCSENFVGDGFKCKSTVDRELRYKGSSNFYFSLVMMEITLKGRGPFTVFAPN
AQAIKSNNSLVRAIVKHRETFANVLRGHIVMCHTLLPDDLYQTRNLTSLSGFVLTTRSTQ
GKITINEANLTNSDDISVNGIIHEIDSVLLPPNLNRDNILLIPNPTEVNLTDVAERHGYK
TFYKLLKDTGVMDLIDNVIFHPVTIFLPSDDVMASLPQQQKDFLFHQQNRAQLQEYLKYH
VMISQKVYAEGLIYLESGRTLQGSALSFSCGGPDKIGEIYVNDGSCRITERHLVFRAGIA
YGIDCLLIPPSLGGRCDEQTVLDLKMNCGPCTRTATLCPRGTVKKEVENCDLPTLFVSKN
SGCQPTCTINFWHPKCCSGFYGRNCLVCPGGVHSPCSNRGKCDDGHLGTGTCTCDTGFKG
TACEMCREGFYGPGCKACNCSDHGSCDDRLQGTGLCFCEEGWTGEQCDIQQTEVFQCSPA
CSSKAVCQENNTCICRPFHVGDGVTCTVVDMCKIWNGGCAREAKCSQREEKVSCTCPQDH
SGDGFTCLPVDPCASGDNGGCSEHATCTMTAPGKKRCTCKDNYMGDGVSCELKQLPISRC
LLDNGGCHPDATCTDLHFEDATLGVFHYRSAKGQYKLDYTAAQQGCRAEGATLANYTQLS
YAQQGGLNMCAAGWLDQARVAYPTTYFNPNCGFGHVGIVDYGTRKNLSETWDAFCYRMKE
VLCVCKPGYIGDGLICTGNLLQVLRSTPTFSNFLIQILKYSEVSESGRRFVKSLSKLEVQ
STLFVPENSGLPENLTLSPRDIEFHLSEGQALPLSQLKNNSQIRTRVGSLSVLGVANLLS
PSALASCFINDRFVTDSDIRASNGIIHVLQGPLEAPPPRPDQMHSAHQAGMGVGVVLLIL
LVVGAIFVGCRFYHHSSKPFQFHYFKDDDREEEPAAETTNYSRSISNPVYEAGPEPAVPE
PSRSNGSGPTGSLEPSVQVEDRQLNLDPVCRVRTTPTAIIHQRP
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcctgctgagtttccagctgctggttctgatgatgacggcggtcgcctcgcag
cagaacttctgctccaactccacggtgctgaggacgcagacggcctgccactcctgctcc
atctccatgtttgttcagtgtcccactggattcaggagaagtccagaaagcctggcatcg
ggctgcaagtaccagatccggaccagcagcctgcagctggccgtcagaggctgctccttc
cagtgcttccagcaggtggagatgaagagctgctgccccggttactggggtccggactgc
acggaatgtcctgatggggccgacagaccctgcagtggcagaggggtctgctccgatggg
cttggggggaacggcacctgcagctgccaggtgggttttgtaggaacggtgtgtgaggac
tgctctcctggacgttacggccccacctgtagttcagagtgctcctgtgtccacggtctc
tgcggttctgggctaaaaggagacggtcgctgcacctgcttctctgggtaccgaggtcct
cgctgtgaccaggagcttccggagtgtgcggccctcagctgccagcagaactcccgctgc
atggaagaagctttgacaggacggctggtgtgccagtgtttgcctggttatgagaaatca
ggatctcagtgtttagccaagaacccgtgtctccggccggtctgccattccttggcttcc
tgtgcccacactggaccggaccagcaccactgcacctgcaacgaaggctacagcggcgac
ggacaggtctgcatgccgatcgatccttgtcagacccaaaatggacgatgctctgccagg
accacccgctgcatttatgatggaccgggaaagtcccactgcgagtgtctaccaggcttt
gagacgctggcggacggcagctgcaacctgaaggacgtctgcaaacccgactcctgtcac
cagaacgccaactgctccacggtgggaccgggtcgggtccggtgcgcctgtctccagggc
tacatcgggaacgggaaggtttgctttgggaacatcatggagcgtctcagggaactgaac
acacagcctgggaaggaatggagcggccagctgagcaacgccatctctctgttcgattct
ctgtcttggcctcttcagaacctgggtccgtttacggtttttgttccagtgaatcgaggt
ttcaagggaacctctatacagactctgactgcagactcatccaaagctaagtacctgtgt
aagatgcacctggttgctggttcaatgccgtcctccactctgatgaagacggatgtcttc
tacacactgtccggaaaggcaggagagacggagatgtctggcaggggtggtcagatcaga
atccgtatccatggcagcaggaagcgaggtgaggtcatcaagtcggacctggcagcgtcc
aacggactcgtccacatcatcacgaagctgatggacagcgtcccggccaccgtggagagc
aggccagatgagaacttgatgaaaatcatctctgactatggcaaattggagacgttcaag
tccctgctggagcaagctgagctggcctctgtgatggacctccctcaacccgtcacggtc
ttcactccgactactgaagcatttaacagcatgaaggagggtcacctgcagttccttcgc
agtacagagggtcgcagcaagctgacagagttcctccggaaccacatcgtcccgtccacc
tcgctggaggtctacaacattgtgtccagccccaccattgtgacaatggccaaccaggtc
ctgatcatcaacgtaacagaaaatggtcagattctggtcaacggagcggccgttctggag
gcagccgtggaggccaagaatggacggctgtacgtgatgaacggagtcttgactccaccc
tccatccaacctttgctgcctcacaggtgtgacatcacagagaccaagatcatcaagggt
gaatgtgtcagctgcgccaaggtccacctgttccagtgctcatcaggagtctacacagac
acctcctactccgggtgtctttacaatctcttctctgacgaatcccccatcaaggtccca
ttcagaggttgcacaccactctgcaccgcgaatgtaacgactccagcctgctgtaaaggt
ttctacggtccggactgctctccttgtccaggtggcttcaacacaccctgctccggacgt
ggccagtgtgtggagggcatcagaggaaatgggtcgtgtatctgtgaacccaacttcaga
ggctctcgctgtcagtactgctcctccttcaacaaatatggtccaaactgtgacagaact
tgtccctgcgtccatggacagtgtgacaaccgtccagactcagatggacgatgtaagctg
gactcttgtcttcgaggtttcaccggtcggttctgtgagcgacagacatctgtctgtgga
ggcctggcccagttctgccatgcccacgctgactgtgacttcactgatgggtcacccagg
tgtgtttgtaaagctggtttccaaggcgatgggatcacctgtgtggagtcggatccctgt
gctccgcctctccgaggcggctgcagtgtgaacgcaaaatgtataaagacaggcccaggt
actcacacctgccagtgtcttactggctggacagaggacggaaacgagtgtcaacccata
aacaactgtgatggtcctgatgggggaggctgccacccaaacgcctcctgcatctacgtt
ggacctggacagagtgactgtgcctgtaaggccggctatatggggaacggacacacctgt
gaggctgtcaaccagtgtgtgacggctaacggaggctgccacttcagggccagctgtctc
ctgctgtcctcacagtggacatgtgtctgtgacgatgggtatgctggagacggactcctg
tgctatggtaccgtcgaccaggagctgatggttctgcagaacgcctcagacttcttccgc
tggaccatggactccggcctgtctcactctttatcggatcagaacctgactctcctggta
ccaacatccgctgccgttgctcagatgtccccaatggacaggagcttctggacaatgaag
ggaaacctgccgagcctcatcagaaaccacgtcctgcccggcgtcttctcctcctccaca
ctgaggaacatctcatcagtgacctctctgctgacctcatcgcttcctgtatcaaccagc
caggagatcacatcagttggaggagcaaccgtcatcgcttcagacagcgctgccaccaac
ggcctgatccatcttattaacaaggttctggtgcctgacaagaagctgagcgaaggtctg
ctggccgtgctcgctctgaggccagagttctcgctcttccgatcctacctcatcgagtac
aacctgacgaaggagattgagcgggccgaagagttcaccgtgttcgccccaacagactct
gccatcacacaatacctccagcaggtggcagcacctgccttggatagcaacatgacccgt
tatcatgtggttctggcggagcgcctgctaaagactgaccttcagcctggagggtacagg
gagacgctcctcggatttcccttccagatcgggatctaccctcgagacggaaagctgttt
gtgaacgatgctcagataaactcctccaacctgctgtgtggtaaaggagtgattcacggt
ctgtcagcggttcttcacatcaacagaaaccgctgtgacaaactgacatacagtaaagta
aaggggtcatgtggaaactgtttattgcccaaaacccaaaaatgtcccagtggcaccgac
catgataaatcggtgaggatgaggagctgcctgtatagacacaccatcgaaggagaatcc
catatgaccatcggctgcatagcaacctgcctccggaagaacattgaacgcaggtgttgt
gaagggtttttcggagagcactgtgagccttgtccgggtccgaagggacaggcctgtttc
ggtaatggactgtgctcagacggggtcaacggcaccggagtctgtaagtgcaacaaggac
ttccatgggacggcctgtgaatcctgtcagagcggaaaatacggagttcactgtgatcaa
gactgtcggtgtaagaacggactctgtaacgagggcctgaacggagacgggacctgcgag
tgtgacgttggctggagaggcgttcgctgtgatgaaaaaattgaatccaaagctgatgaa
ctatgtggttctgtgaaatgtcatagcagcgcaaactgtgcggttcaaacatctggatct
cagtgtctgtgtgctgctggctttgagggaaatgggacattctgtaaagctgtagacccg
tgtctggtgaagaacggcggctgcagtctgtctggggtttgtaaacggacccgacccggc
agcagagactgtgtctgtgggcgcggctatgctggagatgggtttgtgtgtgtggagata
aatccatgcctggaggggaatggaggatgccatgctaaagcagagtgtatccatgttgga
ccaaacaaaactttgtgcgtctgcagcaaaggttactcaggtgatggacagaactgcacc
attgtcaacttgtgtgcaaagaaaaatggcggctgccaccactttgcccagtgcaacatg
acaggacctggcattcggacctgcacctgctctgaaaactttgttggagatggtttcaag
tgcaaaagcaccgtggacagggagctgaggtacaaagggtccagcaacttttacttcagt
ttggtgatgatggagattaccctgaaaggtcgtggtccgttcaccgtctttgctccaaat
gctcaggccatcaaatctaacaactccttggtaagagctattgtgaaacacagagaaact
ttcgccaacgtgctgcggggccacatcgtcatgtgtcacactttgctgcctgacgacctg
taccaaacccgaaacctgaccagtttgtccggattcgtcctcaccactcgttccacccag
ggtaaaatcaccatcaacgaggctaatttgaccaacagcgacgacatcagtgttaacggc
atcatccatgaaattgactccgttctgttaccacccaaccttaacagagacaatatcctg
ctcattccaaatccaacagaggtaaacctgacagacgtggctgaaagacatggttataaa
accttctacaagcttctgaaggacacaggtgtgatggacctgatagacaatgtgattttc
catccagtgacaatcttcctgccatctgatgatgtcatggcctctctgccacagcagcaa
aaggacttcttgttccatcagcaaaatcgagcgcagctccaggagtacctgaagtatcac
gtcatgataagccagaaggtttatgcagaaggattgatctatctggagtccggtcggact
ctgcagggttcagctctctctttctcctgcggcggtccggataaaattggagaaatctac
gttaatgacggatcatgtcggatcactgagaggcatctggtgttcagagctgggattgca
tatggaatagactgtctgctgatcccacccagccttggggggcgctgtgacgaacagaca
gtgttagatctcaagatgaactgcggcccatgcacaagaactgctactctctgtcccaga
ggaaccgtgaaaaaggaagttgagaactgtgatcttccaaccttgttcgtcagtaaaaac
tctggctgtcaacccacctgtaccatcaacttctggcatccaaagtgttgttctggtttc
tatgggagaaactgtctggtgtgtcctggaggagtccattccccctgcagtaaccgaggt
aaatgcgatgatggccaccttggtaccggcacctgtacctgtgacacaggttttaagggc
acggcctgcgagatgtgcagagaggggttctacggtcccggctgtaaagcctgcaactgc
tcggatcacgggtcatgtgacgacagactccaggggacgggtttgtgcttctgtgaggaa
gggtggaccggagaacaatgtgacattcagcaaactgaggtattccagtgctctccagcc
tgctcttcaaaggccgtctgtcaggaaaacaacacctgcatctgtcgaccgttccacgta
ggagacggagtcacctgcacagtggtggacatgtgtaagatctggaatggtggttgtgcc
agagaagctaaatgttctcagagagaggagaaggtgagctgcacgtgtcctcaggaccac
tctggagacggcttcacatgtctacctgtggacccttgtgccagcggggacaacggcggc
tgcagcgagcacgccacctgcaccatgacggctccggggaagaaaaggtgcacctgtaag
gacaactacatgggagacggagttagctgtgagctcaaacagctgccaatcagccgctgt
ctcctggacaatggaggatgccacccagatgctacatgtaccgacctccactttgaagat
gcaacgctgggcgtgttccactaccgttcagctaaaggtcagtacaagctggactacacc
gcagctcagcagggctgcagggcagagggagccaccctagcaaactacactcagctttcc
tatgctcagcagggtggactgaacatgtgtgctgctggctggttggaccaagcccgggtc
gcctaccccactacctactttaatcccaactgtggttttggacacgtgggcatcgtggac
tacggcacccggaaaaacctgagtgagacctgggatgccttctgctacaggatgaaggag
gtgctgtgtgtctgtaaaccaggttacattggcgatggactcatctgtacaggaaacctg
ctgcaggtcctcaggtccactcccaccttctccaactttctgatccaaatcctgaaatac
tctgaggtgtccgagtctggaagaaggtttgtgaagagcctcagtaagctggaagtccag
tccaccctgtttgtcccagagaacagcggtctgccggagaacctgaccctttccccacgg
gacattgagttccacctgtctgagggtcaggctcttcctctgagccaactgaagaacaac
agccagatcaggactcgggttggcagtctgtcagtccttggggttgccaatcttctcagc
ccgtcagctctggcttcctgtttcattaacgaccgcttcgtcaccgactcagacattcgt
gcttctaacgggatcatccacgtcctccaggggcctctggaagctcctcctccccgtcca
gaccagatgcattcagcccaccaggctgggatgggagtgggagtggttctcctgatcctt
ctggtggtgggagccatctttgttggatgccggttctaccaccacagcagcaaacccttc
cagttccactacttcaaggacgacgacagagaagaagaacctgcagctgaaacaacaaac
tacagccgcagcatctctaacccggtctatgaagcgggtccagaaccagcagttccggaa
ccgagccggtccaatggatccgggcccactgggagtctagagccgtctgttcaggtggag
gacagacagctgaatctggacccggtctgccgggtcagaaccactcctacagctatcatc
catcagagaccctga
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integrated database retrieval system
