Xiphophorus couchianus (Monterrey platyfish): 114160946
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Entry
114160946 CDS
T05908
Symbol
nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114160946 (nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114160946 (nup107)
03036 Chromosome and associated proteins [BR:
xco03036
]
114160946 (nup107)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114160946 (nup107)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114160946 (nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
114160946
NCBI-ProteinID:
XP_027899697
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All DBs
Position
17:563316..578318
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AA seq
902 aa
AA seq
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MDWGQSELPSPVVRDDEVTVAARRRKKGAFPSPGCSPIGPSFTQARSLRNTPAPLFRQAV
TPRVPDVSSILVPGTRTPRYTHTPRHNANLEDSDWTNSLYTSPISGLDSSSFFRDNEANL
SSALLKEDDPGEAVAASLFPEFLASFLKHSSSAVFELLEDYQNICQEKVNVLQSVVLRAG
QNSKTAGVRWLLQQENCTWRLIASLYRDRVQLALEEDMTVDMVVPSESEKVVVEQLFQRD
AVVRQSQLVVDWLESIAKDQIGDFSDNIEYYAKNVCWENTLHALKMRSNSASDFHVPLVT
ELDPDAPLRQQRPLADLDREDDARLLKNLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGW
KLYHDPNMTSGNSELQPVEGNPQRGIWKACCWRMAEEEQLNRYERAIYASLSGNIKPILA
VCESWEDCVWAYFRVMVDSLVEKDLMSSGMTHQELETLPREYLEANWTMEKVFEELQASE
TKRVLEETREHFHVIQKFVILGDLDGLMEEFSDWLTASKPLPPHLLRFMTHLVLFFRSLG
LALKEEVCVDVLKAYVSLLIRDQQTDLVASYVGQLPAALATNQYAAFLETVGQPEQRPRC
LQLATAAGLDVSAITRLVVETVRRRDDAGFTHHSQTLETGTTRDDQKKIDIIDWLLFDPA
HRAEALKQSNAIMRNFLALQKHDAAKAVFSKVPEDSMREIYSQWTAMGQTAPLPAEDENA
IREHLCIRAYLEAHEAFTDWFSHSSSAPQRPTLAPEAKFTERVANEMKEKEYLASRTEWS
SRLDVLTEDVKERIYNVLLFVDGGWMVDNRKESESDEERSHQMAALRSLCLPRLTFLLLS
VLQSSSRHQEALRLTDIISSDQHKLYQVFSKEELRRFLQKLRESSLALLDQGLGPLGYDL
QP
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atggactggggtcagtctgagctgccatctcctgtggtgcgagatgatgaggtgacggtc
gccgcccgtaggaggaagaaaggtgccttcccgtcacccggctgcagccccatcggcccc
tcgttcacccaggcccgctccctgaggaacaccccagctcccctgttccgacaggccgtc
actcccagagttccagacgtctcctccattttggttcctggcactcggacgccgcgatac
acacacacaccccgacacaacgcgaacttggaggacagcgattggaccaacagcttgtat
acgtcccccatctccgggttggacagcagcagcttcttcagagacaacgaggcgaacctg
agctcagcgctgctgaaggaggacgacccaggagaggctgtggccgccagtcttttccca
gagttcctggcctccttcctgaagcactcttcttctgctgtgtttgagctcctggaggat
tatcagaacatctgccaggagaaggtgaacgttctgcagtccgtggtgctgcgagcgggt
cagaacagtaagacggcgggggtccgctggctgctgcagcaggagaactgcacctggagg
ctcatcgcctctctctacagagatcgggtccagttggcgctggaggaagacatgacggtc
gacatggttgttcccagtgaaagcgagaaggttgttgtggagcaacttttccagagagac
gccgtcgtacgacagagccagctggtggttgattggctggagagcatcgccaaggatcag
attggagatttttccgataatattgaatattacgccaaaaatgtctgctgggagaacacg
cttcacgctctgaagatgaggagcaatagcgcctccgacttccacgttcctctggtcaca
gagctggacccagacgctcccctccggcaacagcgccctctggcggacctggacagagaa
gacgacgcccggctgctgaagaacctgttcaccctgatccgagcgggaatgacggatgag
gctcagaggctttgtaaacgctgcggtcaggcctggagagcagcaactctggagggctgg
aaactttaccatgaccccaacatgacctcaggaaactcagagctgcagcctgttgaggga
aacccacagcgagggatctggaaggcctgctgctggaggatggcagaggaggagcagctg
aacagatacgaacgggcgatctacgccagcctgagtggaaacatcaaaccgatcctggcc
gtgtgcgagtcgtgggaggattgcgtttgggcgtacttccgggtcatggtggactcgctg
gtggaaaaggatctgatgtcatcgggcatgacgcatcaggagctggagacactaccgcgg
gaatatctggaggccaactggaccatggagaaagttttcgaggagctccaggcgtcggaa
acaaagagagttctggaggagaccagagaacattttcacgtcatccaaaagtttgtgatt
cttggcgatctggacggtctgatggaggagttttctgattggctcacggcctctaagccc
ctccctccgcacctgctgcgcttcatgactcacctggtgttgtttttccgctctcttggt
ttggctttaaaggaggaagtgtgtgtggacgtgctgaaagcgtacgtctccctcctgatc
cgggaccaacagaccgacctggtggcgagttacgtgggtcagcttcccgcggcgctggcc
accaaccagtacgccgccttcctggagacggtcggccagccggagcagcgcccccgctgc
ctgcagctggcaactgcagcaggtctggacgtttctgcgatcacccggctggtggtggag
acggtgcggcgcagagacgacgcaggttttacgcatcacagccagacgctggagacggga
acgactcgggacgaccagaagaagattgacatcattgattggctgctgtttgaccccgcc
caccgggccgaggcgctgaagcagtccaacgccatcatgaggaacttcctggcgctgcag
aaacatgacgcggccaaggccgttttctccaaggttcccgaggattcgatgagggagatt
tactcccagtggaccgcaatgggtcagactgctccccttcctgcggaggacgagaacgcc
atcagggagcacctgtgcatcagagcctacctggaagcccatgaggcgttcactgactgg
ttcagccacagcagctccgctccacagaggccgacgttggcgccagaggccaaattcaca
gagagagtggccaatgagatgaaagagaaggagtacctggcctccaggacggagtggtcg
agtcgccttgatgtcctgactgaagacgtgaaggagagaatctacaacgtgttgctgttc
gtagacggaggctggatggtcgacaacagaaaggagtctgagtcagatgaggagcgaagc
caccagatggcagcattgcgctccctctgtcttccccgcctcaccttcctgttgctcagc
gtgctgcagagttcctccagacaccaggaggcgctgcggctcaccgacatcatctcatct
gaccagcataaactctaccaggttttctctaaagaggagctgaggaggtttctccagaag
ttgcgggagtcatcgctcgctctcctggatcagggactcggcccgctgggctacgacctt
cagccgtga
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