Xiphophorus couchianus (Monterrey platyfish): 114160999
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Entry
114160999 CDS
T05908
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
114160999
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
114160999
NCBI-ProteinID:
XP_027899800
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All DBs
Position
17:5856013..5869562
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AA seq
963 aa
AA seq
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MKNMEKKTVNKKRNNAPQKSRTRINKCLLHQQKVMKHKKKKYKRTVDAFTSSAEIEILPV
GHMDAGGSTCSLNTALFYVNDRFKHSPPVQALPTSRACFHSATPSAEPVSAGTQVTVTLP
SSEGSTLSAEMIWTTVLLGGLCVLHIALLLLAEGSSSSSSSSSSSGGPWGRTVTFRRDKQ
APRLQRDTSSSTDSSNPSRDPNFASCRLPLTPTEHKILDDNTQETGFNGDDGSHVILTWV
GDGTGVILVLSTISAPLDSYLAGGSSRLYRSTDYGKSFHDISHRINHTFIKEELGISVGP
GSSVILNADTPIVDNPGGIIFTSMDAGATFKSTQLPFHLDQSITYHFFNPDYLVALSIDD
GLWLSLDFGARWTKVHEGVHSFSWGAGTNLFFSCSRVDAVEAEERGDLVLKRTKDLGKTF
TIIHEDVFSFGYIGAFLFFSVMEDPRSPRVMYFSSDQGETFSQALLPSASTEQFYSILDG
DEDMLFMHVDNPGDTFFGTMYTSDDRGILFSKSLERHLFDGHRKSDFTNITSLRGVYLTN
KLDIDGRIRSVISFNRGGTWRQLKKPQNVNCADNVKRCNLHIHGEHSRKNRIVPVLALSE
PTAIGLVIAHGSVGDSLSSSQHPDVFVSSDGGYNWIGTLKGPHHYSILDSGGLIVAVEVH
REGQVKTIKFSTDEGQCWKLYNFTEQPFFFAGLASEPGTKAMNVSVWGFRPEEDGQPMWV
AVTIDFQSLITRECNKKDYEEWLAHSTDKRNSERNGCVLGMKETYRRLKKQSVCRNGRNF
VVTKKQIPCPCTREDYLCDYGYYRHVNTSECVRQPNTPNKTFEMCLNGEEDELLTAGYRK
VPSDKCQGGFTPQGVVQTIIRPCGVKPSPDPSAKSTSVGHFDTPKERLVLILVSVGAAVI
VLVAIVSAVLVVKRGVYRTRMPAYRFSNLRMQDDNNDITAELGSAASSNGTACQHDSDVD
LLE
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacatggagaaaaaaactgtgaacaaaaaaagaaacaatgcccctcagaaaagc
agaaccaggataaataaatgccttttacatcaacaaaaagttatgaaacataaaaaaaag
aagtacaaaagaacggtggatgcgttcacatcttctgctgaaatagaaatccttcctgta
ggtcacatggatgcgggtgggagcacctgctctcttaacacagcacttttttatgttaat
gaccggttcaagcactccccacccgttcaagcactccccacctcccgggcttgctttcat
agtgcaacaccttcagctgagccagtctctgcagggacacaggtcactgtaactcttcct
tcctcagagggttccactctctctgctgaaatgatctggaccactgtgctcctcggtggg
ctgtgcgtcctccacattgccctccttctcttagccgaggggagcagcagcagcagcagc
agcagcagcagcagcggcggtccctggggaaggacggtcactttccggcgggacaaacag
gccccacgcctccagagggacaccagcagctccacagactcttcaaacccttctcgagat
cctaacttcgcctcctgccggcttcccctcaccccgactgaacacaagattctggacgat
aacacacaggagacagggtttaatggtgatgacggctcccacgtgattctcacatgggtg
ggcgatggtacaggagtgatcctggtgctgtcgacaatcagcgctccgcttgattcttac
ctggcgggaggctcatctcgactttaccgaagcacagattatggcaagtcctttcacgat
atctcccaccgtatcaaccacaccttcatcaaagaggagcttggaatcagtgttggacca
gggagctcagtgatactgaatgcagacacacccattgtggacaaccctggagggatcatc
ttcacttctatggatgctggagcaactttcaaatccacccagctgccctttcacctggat
cagtccattacttaccacttcttcaaccctgactacttggtggcccttagcatagacgac
ggtctttggctctcgctggactttggtgctagatggacaaaagttcacgagggagtgcat
tctttctcatggggagcaggcacaaatttgttcttcagctgcagccgtgttgatgcagtt
gaagcagaagaaagaggagatttagtgttgaagaggacgaaggatttggggaagaccttc
accataattcacgaggacgtcttcagttttggctacattggagcctttctcttcttctct
gtgatggaggacccgaggtctcctcgtgtcatgtatttttcatcagaccaaggagagacc
ttcagtcaggcgcttctgccttctgcgtcaacagagcagttttactccatcctggacgga
gacgaggacatgctcttcatgcatgtggacaacccaggagacaccttctttggaactatg
tacacgtcagatgaccgtggaatattgttctccaagtcgctggaacgacatctgtttgat
ggacacaggaagagcgatttcaccaacatcacctcactgaggggagtttatctaactaat
aaactagatatcgatggtcgaataagatctgtcatttccttcaacagaggaggaacatgg
aggcaactgaagaaaccccagaatgtgaactgtgcagacaatgttaagcgttgtaacctt
cacattcatggagaacacagtcgtaaaaaccgaatagttccagtgcttgctctgtctgag
ccaactgccattggtctcgtcattgctcacggctctgtgggtgattctctctcatcatct
cagcacccagatgtgtttgtttcctcggatggggggtataactggatagggacccttaag
ggccctcaccactacagcatactagactctgggggtctcatagtggctgtggaggttcac
cgtgaaggacaagtcaagaccatcaaattctccactgacgagggccagtgctggaaattg
tataacttcaccgagcagcccttcttcttcgcaggcctggcctctgagccaggcaccaag
gccatgaatgtcagcgtgtggggcttcaggccagaggaagacggtcagccgatgtgggtg
gctgtcactatcgacttccagagcctcattaccagagaatgtaataagaaggactatgaa
gagtggctggctcattctacagacaaaaggaactcagagagaaatggttgtgtccttggt
atgaaggaaacctacaggaggctgaagaagcagtctgtgtgcagaaatgggcgaaacttt
gtggtcaccaagaagcaaatcccatgtccatgcaccagagaggactacttatgtgactat
ggctactatcgtcacgtgaacacctcggagtgtgtgagacagccaaatactccaaacaaa
acctttgagatgtgtctgaatggagaggaggatgagcttctgactgctgggtaccgaaaa
gtcccaagtgacaagtgtcagggtgggttcactcctcagggtgtggtgcagacaatcatc
cgaccatgcggggttaagcccagccctgacccttcagccaagtccacatcagttggacac
tttgacacaccaaaagaaaggcttgtcctgatcctggtgtctgtaggagcagcagttatt
gttctagtggctatcgtctctgcagttcttgttgtcaagagaggtgtttataggaccagg
atgccagcgtatcgtttctctaaccttcgcatgcaggatgataataatgacatcacagca
gagctcgggagtgctgccagcagcaacggtacggcttgccagcacgactcagatgtggat
cttctcgaatga
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