Xiphophorus couchianus (Monterrey platyfish): 114161038
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Entry
114161038 CDS
T05908
Symbol
hcfc2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114161038 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114161038 (hcfc2)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114161038 (hcfc2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
114161038 (hcfc2)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114161038 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
114161038
NCBI-ProteinID:
XP_027899875
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All DBs
Position
17:15639174..15648178
Genome browser
AA seq
741 aa
AA seq
DB search
MSGSVAGPQWRKVHSVTGVVPRSRHGHRAAAIRELIIVFGGGNEGIAEDLHVYNTVSKQW
FLPAVRGDIPPGCAAHGFVCEGTRILVFGGMVEYGKYTNSLYELQASRWLWKKLKPRAPR
NGSLPCPRIGHSFTLAGGKCYLFGGLANDSEDPNGNVPRYLGDFYELELQPLMGARGWNV
PDTKGGGPSARESHTCVAYASLGSPKLYVFGGMQGCRLNDLWQLDLSSMVWSMPETSGST
PLPRSLHSANVVGNRMFVFGGWTFAPETDKRVTTATEWICSNSLDSLNLDSMCWECVGPE
QQEDFQSQLQNQNQGPQADDPSACWPRARAGHCSAAVGSRLYIWSGRDGYRKSWNYQVCC
KDLWYLETDRPTAPEGVMLIKSTVSVLHVAWRPLAAADFYILQIQPVVRCPTTKPVQLTG
TEGQTGTGQCPADPQSLQNPNEDPSGPGQNASAQDSSAPSDETKAEEQSARRESESKHCG
GAAMEDSSSAQQQQQQPDKQTAPSDQTGDLYASTDQAKENQDGCLWFDVGVFKTLYCEVS
HYFLPAEDQQAFHQRKLPSPQDYPGREKQPLTAGQMYRFRVAGINCFSQGDFSPASEFKT
CQPGFPGAPAAVKISKASDAVQITWEAPTSPSGRILEYSMYLAVRKSRSGSERPGQMAFI
RIYRGTKTSCSVSSSHLENAHIDSSASCRPAVVFRIAAKNEQGYGPATQIRWIQDPIKLR
GSAAKPDGSADADPDAADSSS
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagtgttgcggggccccagtggaggaaagttcactccgttaccggagtcgtt
ccccggtccaggcatggacaccgggcggcggcaatccgcgagctcatcattgtattcggt
ggcgggaatgaagggatagcggaggacctccatgtctacaacacggtctccaaacaatgg
ttcctccctgctgtgaggggggacatcccacccgggtgcgccgctcatggcttcgtctgc
gaaggcacccggatcctggtgtttggtggcatggttgagtacggaaagtacaccaacagc
ctctatgagctccaggccagccggtggctctggaagaagctgaagcccagagcgcccagg
aacggatccctgccctgccctcggatcggacacagcttcaccctggcgggggggaagtgt
tacctattcgggggcctggccaatgacagtgaagaccccaacgggaacgtaccaaggtac
ctgggggacttctatgagctggagctgcagccgctgatgggagcgagaggctggaacgtt
cctgacaccaagggcggcggtccgtcggcgcgagagtcgcacacctgtgtggcgtacgcc
agcctcggctcgcccaagctctacgtgtttgggggcatgcagggttgcagactgaacgac
ctctggcagctcgacctcagctccatggtttggtccatgcctgaaaccagcggctccacc
cctcttcccagaagccttcactctgctaacgttgttggaaacaggatgtttgtttttgga
ggctggacttttgctccagagacggacaaacgggtcaccacggcaacagagtggatttgt
tccaactcgctggattctctgaacctggactcgatgtgctgggagtgcgtcggcccggag
cagcaggaagacttccagtcccagctgcagaaccagaaccagggcccgcaggcggacgac
ccgtccgcatgctggccccgagccagagctggccactgctcggctgccgtcggctccagg
ctgtacatttggagcggccgcgacggctaccgcaagagctggaactaccaggtgtgctgc
aaggacctctggtacctggagacagatcgtccgactgcgccagagggagtgatgctcatc
aagtccacggtcagcgtgcttcacgtggcgtggcgccccctggctgcagcagacttctat
atcctgcagatccagccggtggtccgctgtccaaccaccaaaccagttcagctgactgga
acagaaggacaaactgggacaggtcaatgtcctgcagatcctcagtcccttcagaatcca
aacgaggacccgtccggtccaggacagaacgcatcggcccaggactcatcagcaccatca
gatgaaaccaaagcggaggagcagagtgctaggagagagtctgagtccaaacactgcgga
ggagcagcgatggaggacagcagctcagctcagcagcagcagcagcagccagacaaacaa
accgctccaagtgaccagacgggggatctgtacgccagcacagatcaggctaaggagaac
caagatggctgcctgtggttcgatgtcggcgtgtttaagacgctctactgcgaggtcagc
cactacttcctgccagctgaagaccaacaggccttccaccagaggaagctgcccagccct
caggactacccgggccgggagaaacagccgctgaccgcgggtcagatgtaccgcttcagg
gtggctggaatcaactgcttctctcagggagacttcagcccagccagcgagttcaagacc
tgccagcccggcttccccggagcgcctgccgccgtcaagatctccaaggccagtgatgcg
gtccagatcacctgggaggcgccgacgtctccgtcgggtcggattctggagtactccatg
tacctggcggtaaggaaaagccggtccggctcggagcgcccggggcaaatggccttcatc
cggatctaccgcggcaccaagaccagctgttcggtcagctcctcccacctggagaacgcc
cacatcgacagctcggcgtcctgccgccccgccgtcgtcttccgcatcgcggccaagaac
gagcagggctacggaccggccacgcagatccgctggatccaagatcctatcaaactgcgg
ggctctgctgccaaaccagacggcagcgctgacgctgatccagacgcagctgacagctcc
agctga
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