Xiphophorus couchianus (Monterrey platyfish): 114161046
Help
Entry
114161046 CDS
T05908
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04137
Mitophagy - animal
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114161046 (optn)
04137 Mitophagy - animal
114161046 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161046 (optn)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114161046 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
114161046 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
114161046 (optn)
Xenophagy
Cargo receptors
114161046 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF4248
HsbA
Motif
Other DBs
NCBI-GeneID:
114161046
NCBI-ProteinID:
XP_027899890
LinkDB
All DBs
Position
17:15541973..15553098
Genome browser
AA seq
525 aa
AA seq
DB search
MASGGPMVNGDISRPPGQPGTLEETVQQMNMLIQENRDLKEALRQTNLTMKERFEGLTAW
KEKQRQEKDFLEKRLEEARRCIETLTVQNQELSKRPEAGGGAQSAEADALRAQVARLQAE
KNDLVALNSELQLKAEQGAEEDSFIEIIKVSDAGVEDVNQTCGSERIRRPDLSMTTSRQE
NEEATVSRLLQSLRNETQRCEQLQSELQACTARIQDLEEKNHKVEKTMKTTQTEAKEDAA
KEEKAASEVENLKSQVRTLFRDLQQAQSKLDEAEGMKKNLQDRCREVEQDVATLKAQLLE
KQAVQAENERLKLQLGSLQAQGQLEQKKADDDRNNLAQLKDAYTKLFEDYNELKEEKKRK
ESHMVERNLVEDLQQRLTAAEEALAVKQTKIDDMKQEMFQKEKDLETISVFQAQAEVYSS
DFYAERAAREKLHEEKERLAAQLEFVKKQNTQLQQDMDSLGRRSLNEMQRRHGSTVSGSH
GPDASLVGRGADWNQGNIPEHACPKCNEILPDLDSLQIHIMDCIN
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaggaggccccatggtgaacggagacatctcccgccctccgggtcagccgggc
acgctggaggagacggtgcaacagatgaacatgctgatccaggagaaccgcgacctgaaa
gaggcgctgcgtcagaccaacctgaccatgaaggagcgcttcgagggcctgacggcgtgg
aaggagaagcagcggcaggagaaggacttcctggagaagcgtctggaggaggcccgccgc
tgcatagagacgctgaccgtccagaaccaggagctcagcaagaggccggaggcagggggc
ggagctcagagcgcggaggccgacgccctgcgcgcccaggtggctcgactgcaggcggag
aagaacgacctggtggccctgaactctgagctgcagctgaaggctgagcagggagccgag
gaggactccttcatcgagatcatcaaggtgtcggacgcaggtgtggaagacgtgaaccaa
acgtgcggttcggagcgcatcaggcgcccggacctcagcatgaccacgtcgcggcaggag
aacgaggaggccacggtgagccggctgctgcagtcgctgaggaacgagacgcagagatgt
gagcagctgcagagcgagctgcaggcctgcactgccagaatccaggatctggaggagaag
aaccataaagtggagaaaaccatgaagaccacccagacagaggcgaaagaagacgctgca
aaggaggagaaggcggcgtctgaggtggagaacctcaagtctcaggtgaggacgctgttc
cgggacttgcagcaggcgcagagcaagctggacgaagccgaaggcatgaagaagaacctg
caggacaggtgtcgggaggtggagcaggacgtggccacgctgaaggcccagctgctggag
aagcaggcggtgcaggcggagaacgagcggctgaagctgcagctgggcagcctgcaggcg
cagggccagctggagcagaagaaggccgacgacgacagaaacaacctggctcagctgaag
gacgcctacaccaaactgtttgaggactacaacgagctcaaagaggagaagaagagaaag
gagtcccacatggtggagaggaacctggtggaggacctgcagcagcgtctcaccgctgca
gaggaggcgctggccgtcaagcagaccaagatcgacgacatgaagcaggagatgttccag
aaggagaaggacctggaaaccatctctgtgttccaggctcaggctgaggtctactcctcg
gacttctacgcggagcgagcggcgagggagaagctccacgaggagaaggagcgcctggcc
gcgcagctggagttcgttaagaagcagaacacgcagctgcagcaggacatggactcactg
ggccggcgttctctgaatgaaatgcagcgcagacacggatccactgtatcgggctctcat
ggacccgatgccagtctggtaggaagaggtgccgactggaaccagggcaacattcctgaa
cacgcctgccccaaatgcaacgagatccttccagacctggactccctgcagatccacatc
atggactgcatcaactag
DBGET
integrated database retrieval system
