Xiphophorus couchianus (Monterrey platyfish): 114161051
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Entry
114161051 CDS
T05908
Symbol
rbm17
Name
(RefSeq) splicing factor 45 isoform X1
KO
K12840
splicing factor 45
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114161051 (rbm17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114161051 (rbm17)
Spliceosome [BR:
xco03041
]
Complex A
U2 snRNP components
U2 related factors
114161051 (rbm17)
Complex B
114161051 (rbm17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
Motif
Other DBs
NCBI-GeneID:
114161051
NCBI-ProteinID:
XP_027899901
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Position
17:complement(15387672..15398265)
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AA seq
419 aa
AA seq
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MSLYDDLGVGASDTKTEGWSKNFKLLQSQLKVKKAALTQAKTQRMKQTTVLAPVIDLKRG
GSSDDRLNTDTPPHAAVGLKDAVPSGFSSGDVLIPLADEYDPMFPNDYEKVMKRHREEMQ
RKREQERQKEIEEREKRRKERHEGSAPSGFSRFPATEEDSDEEEEYEKEWRKRSMGGAAI
APPSSLVDREGLSPYEDEGRPGRGAKAAIPPPMYEDSDRPRSPPAPTSSFLANMGGTVAH
KIMQKYGFKEGQGLGKHEQGLSTALSVEKTSKRGGKIIIGDAAEKPGSSQSGAADPSSGG
SAADSSKKSEANPLTEILKNPTKVVLLRNMVGRGEVDEDLEGETKEECEKYGKVVKCVIF
EIAEVTDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRLLDLGEQV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtacgatgacctcggtgtcggtgcaagtgacaccaagaccgaaggctggtcc
aagaacttcaagctgctccagtctcagctgaaagtgaagaaagcggccctgacccaggct
aagactcagcggatgaagcagaccaccgttctggctcccgtcatcgatctgaagagagga
ggttccagcgacgaccggctcaacacagacactcctccacacgccgccgttggactcaag
gatgcggttcccagcggattctcctccggggacgttctgatcccgctggccgacgagtac
gaccccatgttccccaacgactacgagaaggtgatgaaacgccaccgggaagagatgcag
cgcaagagggagcaggagcgacagaaggagatcgaagagagggaaaagaggaggaaagag
agacacgaaggcagcgctcccagcggattctctcgtttcccggcaacagaagaagactcg
gatgaagaggaagagtacgagaaagagtggaggaaacgaagtatgggcggagcagccatt
gcccctccttcgtcgctcgtggacagagagggcttgtctccgtacgaagacgaaggtcgt
cccggcagaggcgccaaggccgccatccctcctcccatgtacgaggactcagaccggccg
cgctcgccgcccgcccccaccagttcattcctagccaacatgggtggtacggtggcccat
aagatcatgcagaagtacggcttcaaagaaggccagggcctcggcaagcatgagcagggc
ctgagcacggcgctgtctgtggagaagaccagcaagaggggggggaagatcatcatcggg
gacgccgcggaaaaaccagggtcgagccagtcaggggcggctgatccttccagcggaggc
tctgcagcggactcttccaagaagtcggaggccaatcccttgacggagatcctgaaaaac
ccgaccaaagtggttctgctcaggaacatggtgggtcgaggagaagtggacgaagacttg
gagggggagacgaaagaagagtgcgagaaatacggcaaagttgtgaaatgtgtcattttt
gagatcgccgaagttacggatgatgaagccgtcaggatcttcctagagtttgagcgggtg
gagtcggccatcaaagccgttgtggatctaaatggacgttatttcgggggtcgagtcgtc
aaggcctgcttctacaatctagacaagtttcgtcttttggatctcggggagcaggtgtga
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