Xiphophorus couchianus (Monterrey platyfish): 114161102
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Entry
114161102 CDS
T05908
Symbol
ppara
Name
(RefSeq) peroxisome proliferator-activated receptor alpha
KO
K07294
peroxisome proliferator-activated receptor alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03320
PPAR signaling pathway
xco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114161102 (ppara)
03320 PPAR signaling pathway
114161102 (ppara)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114161102 (ppara)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114161102 (ppara)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114161102 (ppara)
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
114161102 (ppara)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114161102
NCBI-ProteinID:
XP_027899966
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Position
17:complement(12573896..12620561)
Genome browser
AA seq
490 aa
AA seq
DB search
MGNPYKFGSPISNMAAELYSPPSPLGESLLDSPLCGDLIGNLPDFSQSIEDDSLGFDFPE
YQTTGSGPSSSIPFDTLTPASSPLPGECGASLCPDEGSGPLNLECRVCTDKASGFHYGVH
ACEGCKGFFRRTIRLKLEYDKCERSCKILKKNRNKCQYCRFQKCVSVGMSHNAIRFGRMP
QAEKLKLKEESKVVETEEEDPVKADHKILVRQIHEAYIKNFNMNKAKARLILTGKTSQPP
FIIHDMETFQLAEKTLAAHMVRTESAEPDLHLQTGQIIPALVCEELQQREAEARLFYCCQ
STSVETVTELTEFAKAVPGFQSLDLNDQVTLLKYAVYEALFTLLASCMNKDGLLVARGGG
FITREFLKGLRRPFSDMMEPKFQFATRFNSLDLDDSDLALFVAAIICCGDRPGLVDVPLV
EQLQESIIQALRLHLLANHPGDAFLFPRLLQKLADLRELVTEHAQLVQDIKTTEDTSLHP
LLQEIYRDMY
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatccctataagtttggatccccgatctccaacatggcagccgaactctacagc
cccccatcgcctcttggggaatccctcctggacagtccgctgtgtggagacctgataggg
aatcttcctgacttttcccaatcaatagaagatgactcactgggatttgatttcccagaa
taccaaaccactggttctgggcccagcagctccatcccatttgatactctgactccggcc
tccagtcctttgcctggggagtgcggcgcatcgctttgtccagacgagggtagcggcccc
cttaaccttgagtgcagggtgtgcacagacaaagcttcaggctttcactatggagtgcac
gcgtgtgagggctgcaagggtttctttcggaggaccatcagactgaagctggaatacgat
aagtgtgaacgcagctgtaagatcctgaagaagaatcgaaacaaatgccagtactgcagg
ttccaaaagtgtgtgtctgtggggatgtcccacaacgccatccggtttggtcgcatgccc
caagcagagaagctgaagctcaaggaggaaagcaaggttgttgaaacagaagaagaagac
ccggtcaaggccgaccacaagatcctggtcagacagatccacgaagcctacatcaagaac
ttcaacatgaacaaagcaaaagcgcggctcatactaaccggaaaaaccagccagccgcct
ttcatcatccatgacatggagacgtttcagcttgccgagaagacgttagcagcccacatg
gtaaggactgagtctgcggagcctgaccttcatcttcaaactgggcagataatcccggcg
ctggtttgtgaggagctccagcaacgggaggctgaggccaggctcttctactgctgccag
agtacctcagtggagacggtcacagagctaacagagttcgctaaagcggtgcccggcttt
cagagcttggatttgaatgatcaggtgactctcttgaaatatgcggtttatgaagccctt
ttcacccttctggcctcatgtatgaacaaagatggcctccttgtggcacgtggcggaggc
ttcatcacccgggaattcctcaaaggtctccggcggcctttcagcgacatgatggagccc
aaattccagtttgccactcgtttcaactctctggatctggatgacagtgacctggccctc
tttgtggcagctatcatctgctgtggagaccgtccaggactggtggatgtaccgctggtg
gagcagctgcaggaaagcatcatccaggccctacggctccacctgctggccaatcatcca
ggtgacgctttcctcttccccagactgctgcagaagctggctgacctccgggaactggta
acagagcacgcacagctggttcaggacatcaagacaacagaggacacttcactgcacccg
ctcctgcaagaaatctacagagacatgtattga
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