Xiphophorus couchianus (Monterrey platyfish): 114161128
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Entry
114161128 CDS
T05908
Symbol
rint1
Name
(RefSeq) RAD50-interacting protein 1 isoform X1
KO
K20474
RAD50-interacting protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161128 (rint1)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
114161128 (rint1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RINT1_TIP1
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
114161128
NCBI-ProteinID:
XP_027900034
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All DBs
Position
17:complement(17268156..17282444)
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AA seq
789 aa
AA seq
DB search
MAAVTENQQNSPMRKSSDQLKEKVSHRNGGVPGDLGEQEDYGLSGVLEKEQSDILKSSRN
VCELLEKIREETEALEKQVVNVCSSGPPKVAAALSAAVEVRYSLDELLQREQRISNRLQQ
HLQGTKQWMEDLGQTCNHVDFIERSMKYLKCLHHIEELSAAVQQSLMINSVWDAIKGVEN
MAALDCGLNQSQCSHLCDFLRKTLCFWHNIIKDRLTSDFEKVLAQLQWPIITPNQSVTTP
ANYQELSSQLEGLLLQLLALQTSDDLISQRVSASTQGAPPGSSSTLSPAAPSLCLPIQIM
LQPLSKRFRYHFYGNRQTNSIHKPEWYLTQVLKWMENSATFMEEKIQPVFDRSGQTISAK
VALCQGLVCLVQEKVASDASRMLYDDGLFCHLVEEVLQFEKDLRSHHSYPAMLPALLHIL
LDDAFLQKWLAVERKMAVEKMDAMLSAEGAWTSQYKDISDMDELKAPECAETFMTLLQVI
TERYRALPSPAAQLRFFGLQKELVDDFRIRLTQVMKEESRCPLGVRYCAILNAVNYISTI
LRDWGDNVFFLQLQQAAVSLGQQEVLGSLEMTEVGRLASLEGSLFDGLLSLLDRLKGDML
GRLLHFLMRDTAEKAQPYCQERWLSIPPPQDQSAMSLSSSACPMMLCVRDRLLNLHQVLS
VSLFQLAWQGLAEKLDNFIYQEVILSNHFSDGGAAQLQFDMTRNLFPLFGHYCRRPENFF
KHVKEACIILCLKVGSAILLKDLLKRSEQEATDFEDPSPESALNELGVFCLAPCDVLILL
NLKALLPGI
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagttacagagaatcaacagaactccccaatgagaaaaagtagtgaccagtta
aaagagaaggtttctcataggaatggaggagttcctggtgatttgggggagcaggaggac
tacggactttctggagtcctggagaaggagcagagcgacatcctgaaatcctctaggaat
gtttgtgagctgctggaaaagatccgagaggagaccgaagctttggagaagcaggttgtg
aatgtttgcagttctggtcctcctaaagttgcagcagctctttctgctgcagtagaggtc
agatattctctggacgagctgctgcagagagagcagcgcatctccaacaggctgcagcag
cacctacaggggaccaagcagtggatggaggatctgggccagacatgtaaccatgtggac
ttcatagagagatccatgaaatacctgaagtgtcttcaccacatagaggagcttagtgct
gcagtccagcagtctctgatgatcaacagtgtgtgggacgccataaagggagtagagaac
atggcagccctggactgtggtctaaaccaatcccaatgttcccatctttgtgactttctc
cggaaaactctttgtttctggcataacatcatcaaggatcgactcaccagtgattttgag
aaagtgttggctcagctgcagtggcccatcatcacacctaaccagtcagtgacgacacct
gctaactaccaggagctgagcagccagctggagggactgctgttgcagctgctggctctg
cagacctccgatgacctcatatctcagagggtttcagcctccactcaaggagcgccgcct
ggctcttcatccaccctgtcccccgcagcaccgtccctctgtctgcccattcagatcatg
ctgcagccgctcagcaagaggttcagatatcacttctatggaaatcgtcaaaccaactcc
atacacaagccagagtggtacctcactcaggtcctgaaatggatggagaacagcgccacc
ttcatggaggaaaagattcagccagtctttgaccggtccggacaaaccatcagtgccaag
gtggcgctgtgtcaaggcctggtgtgtttagtccaggagaaggtagccagtgatgcctct
cgaatgctgtatgatgatgggctcttctgccacctagtggaggaggtcctgcagtttgag
aaggacctgagaagccatcattcctacccggcaatgctgcccgctctgctccacatcctg
cttgatgacgccttccttcagaagtggctcgccgtggagaggaagatggctgtggagaag
atggacgctatgctgtcagctgagggagcctggacatctcagtacaaagacatcagtgac
atggatgagctgaaggcaccagagtgtgcagagacattcatgactctcctgcaagtcatc
acagaacgttatcgggccttgcccagtcctgcagcacagctcaggttttttgggctgcag
aaggaattggtcgatgacttccgcatacgactaactcaggtgatgaaagaggagtcccgc
tgcccactgggggtccggtactgcgccatcctcaatgcagtcaactacatttcaaccatt
ctgagagactggggggacaatgtgtttttcctccagctgcagcaggctgcggtttctctg
ggacagcaggaggttctgggcagcctggagatgacagaagtcgggcgtctggcctccctg
gaggggtctctgttcgatggtctgctgtcactgctagatcgactgaagggagatatgttg
ggaagactgctgcactttctaatgagagacacggctgaaaaagcccagccatactgtcag
gaaagatggttgtccattccacctcctcaagaccagtctgccatgtccctgtccagttca
gcgtgtcccatgatgctttgtgtgagggatagactgttgaaccttcatcaggtcctgagt
gtttctctgttccaactcgcctggcagggtttggcagagaaactggacaacttcatttac
caagaggttattttgtctaatcacttcagtgatggtggagcagctcagctccagttcgac
atgaccagaaacttgttccctctgttcggccattactgcagaagacctgagaactttttt
aagcatgtgaaggaagcatgcattattttgtgtctaaaggttggctctgccattctccta
aaggatctccttaaacgctctgagcaggaagcaacagactttgaagatccttcaccagag
tctgctctgaatgagttgggagttttctgtttggcaccatgcgatgtgttaatccttctc
aacctcaaagctttactgccaggaatataa
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