Xiphophorus couchianus (Monterrey platyfish): 114161135
Help
Entry
114161135 CDS
T05908
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114161135 (pus7l)
Enzymes [BR:
xco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
114161135 (pus7l)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
114161135 (pus7l)
Prokaryotic type
114161135 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
114161135
NCBI-ProteinID:
XP_027900044
LinkDB
All DBs
Position
17:complement(10991440..10996577)
Genome browser
AA seq
682 aa
AA seq
DB search
MTESPVKVTMKGDEPVNVPAYFISKHEGFVGSIKTFIEDFVVTEIDINGQKVKTAQAVQT
AGCTSSEENQANTELKENLYCSGSQDADVSSDWGAGSDTPLPALESFDLDVILGPSVSED
LEQFVMTLREKRPSGPELSLGSFSDKHQRANVHRAVRHRFPFLLTVTIQPEIRVREDPDY
RELARLVREEEAEDFFRFIDAKVRGSSYTFGPDDSKEHRTAVHHFLNRRFGKLVETKSFC
SQGRTSISVRLREHGKPKKRTAEERKEEDIYTAFTLCKENLETLEAISYMAATLGVLPSD
FTYAGIKDKRAVTYQSMVVKKVSPQRLKEKVAEFEKRGMRLSQIRSVNEPLKLGRLRGNH
FDLVVRKLRPHGASDGHLSGADGDTRLAALVKEAVENVKRRGFVNYYGPQRFGSGQSVLS
DRVGLALLKEDMVSAVRLFFSPEDSDDPHSLAKRHFLQTDNPKESLALMPLSKPRERLML
RALNRYGTGPDGCVQAWLSLPHSIRVFYPHAYCSRVWNDAAAHRLSAMGLGVRQGDLVWT
QTGQNRTEDAGEIISPQIHVVTREEEQAGVYTLEQVLLPMPGNSVKYPENAMRAWYQERL
AGDGLAESRFRVSSLKLNLPGCYRPLLAIPHNLSYQLHRAACSHGAKKQESDPGSLTLSL
NFDLDSSCYATICLREIMKCET
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgacggagtcaccagtaaaggtgacaatgaagggcgatgagcctgtaaatgttcctgcg
tacttcatctcaaaacatgaaggcttcgttggaagcatcaaaaccttcattgaggacttt
gttgtcaccgagatcgacattaatggacagaaggtcaaaacagcacaagccgtgcagaca
gccggctgcacctcctcagaggaaaaccaggcaaacacagagttaaaggagaatctttac
tgttctggctcgcaagatgctgacgtctcatcagactggggggcgggttcagacacccca
cttcctgctttggaaagctttgatttagatgttattttaggcccgtctgtgagtgaagat
ctggagcagtttgtgatgaccctaagagaaaaacggccatccggtcctgagctctctctg
ggctccttctccgacaaacaccagagagccaacgtccaccgagccgtccggcaccgcttc
cccttcctcttgaccgtcaccatccagcccgagatcagggtgagggaagaccccgactac
agggagctggcccgactggtcagagaagaggaagcggaggacttcttcaggttcatcgat
gccaaggtgcgagggtcgtcttacacttttgggccggacgacagcaaggagcacaggact
gcagtgcaccactttctgaacagaaggttcgggaaactggtggagacgaaaagcttctgc
agccaaggaaggacgtcgatctcggtgagactgagagagcacggcaagccgaagaagagg
acagcggaagaacgcaaggaagaagacatttatactgctttcaccctgtgtaaggagaac
ctggagacactggaagccatcagctacatggcagctactctcggggtcctgccatcagac
ttcacctacgccggcatcaaggacaaaagagccgtcacctaccagtccatggtggtcaag
aaggtctcgccacaacggttgaaagagaaagtagcagaatttgaaaagagagggatgcgt
ctgtctcagatccgctcggtcaacgagcccctgaagctgggacggctgcgggggaaccac
tttgacctggtggtccgcaaactcagaccacacggagcctccgacggacacctctctggc
gccgacggggacactcgcctggcggctctcgtgaaggaagccgtggagaacgtgaagagg
agaggttttgtcaactactatgggccacagcggtttggaagcggacaaagcgtcttgtca
gatcgagtaggattggctctgctgaaagaggatatggtcagcgctgtacgtctgttcttc
tctccagaggacagtgatgatcctcacagcctcgcaaagagacacttccttcaaacagat
aaccctaaggaatccttggcactcatgccgctgtccaagcccagggagaggctgatgctc
cgcgccctgaatcgctatggtaccggcccagatggttgtgtccaggcgtggctcagcctg
ccgcacagcataagggttttctatcctcacgcctactgtagcagggtgtggaacgacgcg
gcggcacacaggctctccgcgatgggtctcggtgtcagacaaggagacctggtgtggacg
caaacaggacaaaacagaaccgaggacgccggagagatcatttctccccaaatccacgta
gtgacgcgtgaagaggagcaagcgggagtttacacattagaacaagtgttattgccaatg
ccagggaactctgtaaaatatccagaaaacgcaatgagagcctggtaccaggagaggctg
gcaggagacgggctggctgaaagccgcttcagagtcagcagcctcaaactgaacctgccg
ggctgctaccgccccctgctggccatcccacacaacctcagctaccagctgcacagagca
gcctgcagccacggcgcaaagaagcaggaatcggacccggggtctctcacactcagcttg
aactttgacctagactcctcctgttacgccaccatctgcctccgagaaatcatgaagtgt
gagacttga
DBGET
integrated database retrieval system
