Xiphophorus couchianus (Monterrey platyfish): 114161171
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Entry
114161171 CDS
T05908
Symbol
dcp1b
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114161171 (dcp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114161171 (dcp1b)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114161171 (dcp1b)
mRNA degradation factors
5'-3' decay
Decapping complex
114161171 (dcp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
Motif
Other DBs
NCBI-GeneID:
114161171
NCBI-ProteinID:
XP_027900116
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Position
17:complement(3807649..3822412)
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AA seq
630 aa
AA seq
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MSSAASNSCLAAKGLDISLSALQRQDPYINNIVDVASQVALYTYNNRANEWEKTEVEGTL
FIYTRLASPRHGFTIMNRLNMENLTEPITKDLDFQLQDPFLLYRNARLFIHGIWFYDKQD
CQRIAQRMRILTQQEQILAQSQGGSLSPRAAAEGQGVLVGGNTEAKAVDIIQMLTKARTE
YDKSTSEPKEIGGSSVLCGNPNLIKPIPVKPNTQVNEGADTTVVTLTTLLGSQHQHHHPL
KSDPVPPLAASTAAGKVARPPVARTLTYEDSLNSGRNVATSGGGDPAVGPADREESGNAL
RQLPNQLQHCPAIAKLMQGQRGAAAAGGVLQTLSESPENRLCDNGVPLEHHHHHHPLHHQ
HQHPHLHHHHQEQQHDPIKRLLQNHPPPLLATSFTAAASLVLQQNPYPASQPGQLDSVSR
SHLEAQQGQQLLLGLTKLQAEIQKRGPTDSAAMGTGLSSQMQGVVSPHELLQKLQLVQQE
QSLTSHEHPRLHPHPGLAPRFLGPSASQSQGSSLGTGPTQTSVAPDQKAELQFQIISPQR
IPATVAPILLLSPSVFTQTKSSSRLPVAAPESSSVPSTLCKPSLQEEARALSRSQLQAAL
LHLIQTDSSFLDSIYKAYVSRFANSSGSKY
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgcagctagcaatagctgccttgctgctaaagggctggacataagtctgtct
gccctgcagagacaagacccttacataaacaacattgtggacgtggccagccaagtcgcc
ctgtatacttataataaccgagcaaatgagtgggagaagacagaagtggagggcactttg
tttatttacacaagattggcatctcctaggcatggcttcacaataatgaaccgtcttaat
atggagaatctgacagagcccatcacaaaagacttggacttccagctgcaggaccctttc
cttctttaccgtaatgcacgactgtttattcatgggatctggttctacgataagcaggac
tgtcagcgaattgcacaaaggatgaggattctgacccagcaggagcagatcctcgctcag
tctcagggtggttccttatcccctagagcagcagcagaaggacaaggtgtcttagttgga
ggaaataccgaggctaaagcggtcgacatcattcagatgttgaccaaggcacgaacagag
tatgataagtctacctcagagccaaaggagattgggggcagcagtgtactgtgtggaaat
cctaatctgatcaaaccaataccagttaaaccaaacactcaggtcaatgaaggagcagac
accacggttgtgaccttaaccaccctgttaggctctcagcatcagcaccaccaccctctt
aaatctgacccagttcctcctctggctgcttccacggcagcaggaaaggtcgcccgccca
cctgtcgcccgcacactgacctatgaggattcactaaactctggcagaaacgtcgccacc
tccggaggtggagacccagcagtcgggccggcggacagggaagagagcgggaacgctctc
cgccaactgccgaaccaacttcagcactgtccggccattgcaaagctcatgcagggacag
aggggggcggcagcagctgggggcgtgcttcagacactgtccgagtccccagagaaccgg
ctgtgtgacaacggggtgccgctagaacaccaccaccaccatcatcccctccatcaccaa
catcagcacccccacctccatcaccaccaccaggagcagcagcacgacccaataaagcgt
ctcctgcaaaaccatccaccccctctactcgccacttctttcactgctgcggcttctctg
gtgctgcagcagaacccttatcccgcctctcagcctggccaactggattctgtgtcacgt
tcccacctcgaagcacaacaaggtcagcagctcctcctcggcctgacgaagttacaggca
gagatacagaagagagggccgacggattctgctgccatgggaacaggtttgtcatcccag
atgcagggtgtggtttctcctcatgagctcctgcaaaaactccagctggtccagcaggaa
cagagcttgacttcccacgaacatcctcgactccatccacatccaggactggcacctcga
ttcctggggcccagtgcgagtcaaagccaaggctcatctttaggcacaggcccaacccag
acttcagttgccccagatcaaaaagctgagctgcagtttcagatcatctccccacagcgg
atacctgccacagtggcccccatcctgctcctctctcccagtgtgttcactcagacgaag
tccagcagcaggctaccagtggctgctccagaaagcagctctgtaccctcaaccttatgc
aaaccttcactgcaggaggaggccagagctctttctagaagccagcttcaagcagcactg
ctgcacctgattcagactgacagctcattcctggactccatctataaagcatacgtcagc
cgcttcgctaacagctccggcagcaagtactga
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