Xiphophorus couchianus (Monterrey platyfish): 114161175
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Entry
114161175 CDS
T05908
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114161175
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
114161175
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
114161175
NCBI-ProteinID:
XP_027900120
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Position
17:17549609..17566874
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AA seq
910 aa
AA seq
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MVHLSPPHNLPVTQDSADGEDRHGEQLDTISSPKVEDLPEGLDSPQVSLEVSTAYHGYET
YIEDGLICLKHKVRNLEKKKLKLKDYQKRLRQGEVLNKDQMIAVEKYDEVLHNLEFAREL
HKTLDGLTQNLLKAQRKVVKKEQIANMETERRRLALVLQFQHLLGGLQQEHIRKDIMAGR
NHAPYIPAHQLHSLNQLAAMMGVKRDGRMSLAEQMDQAALVYIDLLDGRDKPVAGSTYKL
LKDELIRLLKYNFFSCLPPPPKASELSLTSANPSALKSMPKENSKELFNRLYLTDLETLN
SQNWKEDFQAVREQEPPDSWDSEFPDGPLSSQIAVNKPWKGAATFIPKVVQVPSKKHSTE
SKQRKEKKTKGQQNAKLPNQMNLLVEVFSSPSALPKDPVLRKQHLEDLMTKIHGSFSFMQ
DSLLDGETSETNRTPRLNRCSSGALSPLAQGCLRSPSDILAKTMHSTPLPPRLMDRKASV
TVVDSNVETGGLEPSSNNHSQVSIKLVDRKGYSSPPLFHGEATIADQEENCTPGTESGKQ
SPCNGLRSNTSTPPQADSFSTPPMRRALTTSQFHSVFKVATSSPQNGELHYKSHTAVCSR
SKYSTASTQTPPEFAPPDDEPQMVCQSEYSAVNSGQMFLSPGQTGGGLNRSSQSYSRGSV
RGMARGGKGLAQNCRSSGWHRGGSYIPPAHLRESVPLLYAARDSGYQHVYRRGGVKHGSA
AWSDSSQVSSPDRDGAFTVVDSGHGDSLSVSTVEVPLTPHSHPPTALLSMPLYPLSQPLR
VAFTASRTANFAPGNLDQPIVFDQLHSNLGEMYNTHIGRFTCPVNGTYVFIFHILKLAIS
VPLYVNLMRNEEVMVSAYANDGAPDHETASNHAILPLFQGDQVWLRLHRGAIYGSTWKYS
TFSGFLLYQD
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacctgtctccgcctcataacctgcctgtgacccaggactcagctgatggggag
gacaggcatggggagcagctggatactattagtagcccgaaggtggaggacctgccagag
gggctggacagccctcaggtcagtctggaggtgtccacagcctaccatggctatgaaaca
tatatagaagatggcctcatctgcctgaagcacaaagtccgtaacttggagaaaaagaag
ctgaagctgaaggactaccagaagaggctgagacagggggaggtgctcaacaaagatcag
atgattgctgtagagaagtatgacgaggtgctccataacctggagtttgcacgggagctg
cacaaaaccttggatggtcttacccagaatttgctgaaggcacagaggaaggtggttaaa
aaggaacaaattgcaaatatggagactgagaggaggcgtctggccctggtgcttcagttt
caacaccttcttggtggcctacagcaggagcacataaggaaagacatcatggcaggacgc
aatcatgcaccctacatcccagctcaccagctgcacagcctgaaccagcttgctgctatg
atgggggtcaaaagggatggcagaatgagcttggcggagcagatggaccaagctgccctc
gtctacatagaccttctggatgggagggacaaacctgtggctggatccacatataagctg
ttgaaagatgagctcatcagactgttaaagtacaatttcttcagttgtctcccacctcca
cccaaggcttcagagttgtctctgacatcagccaacccgagtgccttaaaatcgatgcct
aaagaaaattcaaaggagcttttcaacaggctctacctgactgatttggaaactttgaac
agtcagaactggaaggaggactttcaggctgtgagagagcaggagcctccagatagctgg
gattcagaattcccagatggacctctgtcatctcaaattgcagttaacaaaccatggaaa
ggggctgccactttcatacccaaggttgtccaagtcccctctaaaaaacactctactgaa
agcaaacagagaaaagagaagaaaaccaaaggacagcaaaatgccaagttgcccaaccaa
atgaatttacttgtggaagttttcagctccccctctgccttacccaaagaccccgtactg
cggaagcagcaccttgaggacctcatgactaagatccatggctccttcagttttatgcag
gactccctcctagatggtgagacctctgagaccaaccgtactcccaggctaaataggtgc
tcatctggagcactctctcctctagcccagggatgcctgagaagcccttctgatatcctg
gccaaaacaatgcattctaccccattacctcccaggctgatggatcgcaaagccagtgtg
acagttgttgattcaaatgtggagactggaggcctggagccatcctcaaacaaccactcc
caagtgtcaataaagctggttgacagaaaagggtattcctcaccaccacttttccacggg
gaggctaccattgcagaccaggaagagaactgtactccaggaaccgagtcagggaagcag
tctccctgtaacggactgagatccaacacctccactccacctcaggcagactctttctct
acacctcccatgaggcgagctctcactacatctcagtttcactctgtcttcaaggtggcc
acatcttcaccccaaaatggagaactgcactacaaatcccacactgcagtttgttccagg
tccaagtacagcaccgccagcacccaaacacccccagagtttgcgcccccagatgatgag
cctcagatggtgtgtcagtcagaatactcggctgttaacagtggacagatgttcctgtcc
cctggccagacaggtggaggtttgaatcgaagcagtcagtcctacagtagaggctctgtc
agaggtatggcacgtggtggcaagggactggctcagaactgtcggtcctctgggtggcac
agaggaggatcctacatccctcccgctcacctcagggagtctgttcctcttctctatgca
gctagagactcaggatatcaacacgtatacaggcgaggaggagtaaagcacggctctgca
gcctggagtgactcttcccaggtgagcagtccagaccgggacggagcctttactgttgtg
gactctggtcatggggattccttatctgtatcgacagtggaggtcccactgactccacac
agccatccgcctacagccttactctccatgccgctttacccgctctcgcagccactgcgt
gtggccttcactgcctctcgcaccgccaactttgcacccggcaaccttgaccagcccatt
gtgttcgaccaactgcatagcaacctgggggagatgtacaacacccacattggtcggttc
acctgtcctgtgaacggaacatacgttttcatttttcacatcctgaagctggccatcagc
gtccccctctatgttaacctcatgcgcaacgaggaggtgatggtatctgcgtatgccaat
gatggagcccctgatcatgagaccgccagcaatcatgccattttgcctcttttccaagga
gaccaggtgtggctcaggctgcaccgtggtgccatctatggcagcacgtggaagtacagc
acgttttcaggcttcttactttatcaggactga
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