Xiphophorus couchianus (Monterrey platyfish): 114161188
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Entry
114161188 CDS
T05908
Symbol
pwp1
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114161188 (pwp1)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
Other 90S particles
114161188 (pwp1)
Pre-60S particles
Other pre-60S particles
114161188 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
114161188
NCBI-ProteinID:
XP_027900151
LinkDB
All DBs
Position
17:11915618..11920897
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AA seq
499 aa
AA seq
DB search
MSSQITCVGWVKRGVAKETPDKVELSQEELQRIITEARDDLGDVAGEDEDEEEDEGIPRD
DDPSGETVDDDDDDDDELGPKTGNDDEEEDDELAEYGLDKYDEEDAATANLGDSLAGLTV
FSSNDEDPYITIKDTDQYEREDFHIKPTDNLILAGKTEKDCCNLEIYIYNSEEESMYVHH
DILLPAYPLCVEWLDFDPNPQEGRANYVAVGNMTPQIDVWDLDVVDCLEPVFSLGSKKAS
KKKKKSKKGAAVEPVEGHTDAVLDLSWNKLVRNVLASGSADDTVVLWDLSQGKPATTLRK
HTDKVQTLRFHPFEAQTLISGSYDKTAVLYDCRNPDSSFRTWRFSGQVERLAWNHFSPFN
FLASTEDGFVYCLDARTDKPLFTLKAHDEEVSGLDLSSQIKGCLVTSSADKHVKIWDILS
NKPSLVHSRDMKMGVLFCASCCPDLPFVYAFGGQKDGLRIWDISDVAAVSEVFGSRERMT
VNPGSQASSPAATADMEVS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccagattacgtgtgtcgggtgggtgaagcgtggcgttgccaaggaaacccct
gacaaggtcgagctgagccaagaggagcttcaacgcatcatcaccgaagctagagacgat
ctgggggacgtagcaggggaagatgaagatgaggaggaagatgaaggtattccacgtgat
gacgatccatctggagaaacagtagatgatgatgatgatgatgatgatgagttgggtcca
aagactgggaatgatgacgaggaggaagacgatgaactggcggagtatgggctggacaag
tatgatgaagaggatgcagctactgctaaccttggtgacagtctagctgggctcacagtg
ttcagctctaacgacgaggatccctacatcaccatcaaagacacggaccagtatgagcga
gaagacttccacatcaaacccactgataacctcatcctggctggcaaaacggagaaggac
tgctgcaacttagagatctatatttataactcagaggaggaatctatgtatgtccatcat
gacatcctgctgccagcctatccgttgtgtgtggaatggctggacttcgatcccaaccca
caagagggacgagctaactacgtcgccgtgggcaacatgactccacagatagacgtgtgg
gatctggatgtggtggactgtttggagccagtcttctccctcgggagcaaaaaggcctcc
aagaagaaaaagaaaagcaaaaagggtgcagcagtggagcctgtggagggacacacagat
gcagtgttggatttatcctggaacaagctggtcaggaatgtgctggccagtggatctgca
gacgacacggtcgtcctgtgggatctgtctcaaggcaagccagccacaactctgcggaag
catacagacaaggtccagacgttgagatttcatcccttcgaggcacagaccttgatatct
ggatcatatgacaagacagccgtcctttatgactgccggaatccagacagcagcttcaga
acctggaggtttagtgggcaagtggagaggctggcctggaaccacttttcacccttcaac
ttcctggccagcacagaagacggtttcgtctactgtctagatgcccgcaccgataaacca
ttgttcacactaaaggcacacgacgaagaagtgtcaggtttagacctcagcagccagatc
aaaggatgtctcgtcacctcatctgctgacaaacacgtaaagatttgggacattttaagc
aacaagcccagcctggtgcactctcgagacatgaaaatgggggtgctgttctgtgcttcg
tgctgccctgatctgcccttcgtctacgccttcgggggacagaaggatggcttgcgaatt
tgggacataagtgacgttgcagcagtgagcgaggtgttcggcagccgagagcgcatgacg
gtgaacccgggaagccaggcttcctcgcctgcagccacagcagacatggaagtctcctag
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