Xiphophorus couchianus (Monterrey platyfish): 114161218
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Entry
114161218 CDS
T05908
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
xco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114161218 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114161218 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114161218 (tnpo3)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
114161218 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
114161218
NCBI-ProteinID:
XP_027900190
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Position
17:complement(76548..86718)
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AA seq
923 aa
AA seq
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MEGGKPSLTLVYQAVQALYHDPDPSGKERASLWLGELQRSMFAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHNALRDSLLTHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNEDAGSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAFYSNTV
IALLTSCVEKAGGDEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQILQRDETSTN
LHEAASDCVCSALYAIESVDTNVALALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKINDAN
LHGVFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWEVTEAVLFIMASIAKSVDPENNPTVAEVLQQVVLLPESVHMAVRYT
SIELVGEMSEVVDRNPHFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVLALKKLLAERS
RNGKSADPTAWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNSLRNHPDTVDDLFRLATRFVQRSPVTLLGSSIVVHIIQCA
IAATSLDHRDANCSVMKFIRDLIHTGVGNDHEEDFALRKRLIGQAMEQNGQQLINQLLHS
CCFCLPPYTLPDVAEVLWEVMLFDRPMFCRWLENALKGLPKQTAGGALTVTHKQLTEFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggtaaaccgagcctgacgctggtctaccaggcggtccaggccctgtaccac
gacccggatccgtccgggaaggaacgagcctcgctgtggctcggagagttgcagagatcg
atgtttgcctgggagatctcggaccagctgctgcagctgaagcaggacgtggagtcgtgt
tacttcgctgctcagaccatgaagatgaagatccagacttccttctacgagcttcctcca
gagacccacaatgcactgcgggactccctgctgacccacatccagaacctcaaagacctg
tcgcccatcatcgtcactcagctggccctggccatcgctgacctcgctctgcagatggcg
tcctggaagggctgcgttcacacgctcatagagaagtacaacgaggacgcgggctccatg
ccgttcctcatcgagatcctgacggtcctgccggaggaagttcacagccggtcgctgcgg
atcggcgccaaccgccgcaccgagatcatcgaggacctggccttctactccaacaccgtg
atcgccctgctgacgtcctgcgtggagaaggcaggcggcgatgagaagatgctcatcaag
gtgttccgttgcctgggcagttggttcaacctgggcgtcctggacagcaacttcatggcc
agcaaccagctgctgatggtcctgttccagatcctgcagagggacgagacgtccaccaac
ctgcatgaggcggcgtcggactgcgtgtgctcggcgctgtacgccatcgagagcgtggac
accaacgtggctctggcgctgcagctgttccagggcgtgctgacgctggagacggcctac
cacatggccgtggcccgcgaggacctggacaaggtgctgaactactgccggatcttcacg
gagctctgcgagacgttcctggagacgacggtccgaacgccgggtcagggcatgggcgac
ctgaggacgctggagctgctgctgatctgcgccggacacccgcagtacgaggttgtggag
atctcctttaacttctggtaccgcctgggcgagcatctctacaagatcaacgacgccaac
ctgcatggcgttttccggccgtacatccagcggctgctgcactgcctggcccgccactgc
cagctcgacccggaccacgagggaattccggaagaaacagacgactttggggagttcagg
atgagagtatcggacctggtgaaggacgtgatcttcttggtcggctccatggagtgcttc
tctcagctgtactccaccctgaaggacgggaacccgccctgggaggtgacggaggccgtc
ctcttcatcatggcttccatcgccaagagcgtcgacccggagaacaacccgacggtggcc
gaggtgctgcagcaggtggtgctgctgccggagagcgtgcacatggctgtgcgctacacc
agcatcgagctggtgggggagatgagcgaggtggtggaccggaacccgcacttcctggac
ccggttctgaactacctgatgaagggcctgagggagaagccgctggcgtcggcggcggcc
aaggccatccacaacatctgctcggtctgccgcgaccacatggcccagcacttccagggg
ctgctggacatcgcccgctccctcgactccttcgccctgtccaccgaggccgccgtgggc
ctcctcaaaggtacggcactggttctggcccggctgcctctggagaagatcgcggagtgc
ctcagcgacctgtgcgccgttcaggttctggctttgaagaagctgctggcggagcggtcc
aggaacgggaagtcggccgacccgacggcgtggctggaccgactggccgtcatcttcaga
cacacgaaccccatcgtggagaacggccagacgcacccgtgccagaaggtgatccaggag
atctggcccgtcctgtcggagacgctcaacgcccaccaggctgataatcgcatcgtggag
cgttgctgccgctgcctgcgcttcgccgtgcgctgcgtcgggaaaggctccgcctccctg
ctgcagccgctcgtcactcagatggtgagcgtctaccaggtgtacccgcactcctgcttc
ctgtacctgggcagcatcctggtggacgagtacggcatggaggagggctgcaggcagggg
ctgctggacatgctgcaggcgctgtgtatgcccaccttccagctgctggagcagcccaac
agcctgaggaaccacccggacaccgtggacgacctgttcagactggccaccaggttcgtc
cagaggagtcccgtcacgttgctaggcagcagcatcgtggtccacatcatccagtgcgcc
atcgccgccacatcgctcgaccaccgggacgccaactgcagcgtcatgaagttcatccga
gacctgatccacaccggagtcggcaacgaccatgaggaggactttgcgctgcggaagcgt
ctgattggtcaggccatggagcagaacggccagcagctcatcaaccagctgctgcactcc
tgctgcttctgcctgccgccgtacacgctgcccgacgtggccgaggtcctctgggaggtc
atgctgttcgaccgacccatgttctgccgctggctggagaacgcgctgaaggggttgccg
aagcagacggcgggcggcgccttgaccgtcacccacaagcagctgaccgagttccacaag
caggtgaccagtgctgaggagtgcaagcaggtgtgctgggccatcagagagttcaccagg
ctgtaccggtag
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