Xiphophorus couchianus (Monterrey platyfish): 114161229
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Entry
114161229 CDS
T05908
Symbol
dennd4a
Name
(RefSeq) C-myc promoter-binding protein isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114161229 (dennd4a)
Membrane trafficking [BR:
xco04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
114161229 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
114161229
NCBI-ProteinID:
XP_027900219
LinkDB
All DBs
Position
2:12615975..12643599
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AA seq
1685 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSFKPLEEDLHFDDAGTKSVKPKAPITDVAVVIRSLGEEVP
LGFTCVESTPSGLSAELNGASLRGLQIFLCYKRGRDKPPLTDLGVLYEWKEKLKPGCHIV
QTTPSGRPANISSSSSQRIYITYRRAPKSQPHTSLAVTDICVIVPGKGETPPHTFCKVDK
NLNSSMWGSSVYLCYKKSLAKANTIAYKAGLLCRYPEEDYESFPLPESVPMFCLPMGAMI
ECWPAHTKHSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEENISERQRSQLGLPSCHLGP
DSSRNIYNNKSICLLSHWPFFQSFKSFLTFLYRYSISGPHALPIEKHISHFMKNVPFPSI
QRPRILVQLSPHDSLILSQPVSSPLPLSGGSLSTLLLNLGPKNAVTLLVLAVTEHKILVH
SLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGLDSRYFDLYVPP
ADISCVDLDTNTISQKDEKKALTWKLLPRRACKHLLNSLNKLYQQLTDGCQLNRDDVQMD
HTMTDSELYGGKSLHTLELEIQEAFLRFMAAILRGYRSYLQPITQAPSEKTTDVTSLFDL
QGFLKSRDRSHQRFYSLMTKTQMFSRFIEECSFVSDKDASLAFFDECVDKLFTSGSKMDS
ERPEDTRLIELDESHRSEHTVYINPPELPPLPQGEEHPLCYSYSGFPVLRSDLLETMEGP
NSNSAGIAPRHSTPASPTAIFRRSKQEIKSAQKMAKTHSSMPQMWSKCLLRHCYGLWFIC
LPGFVGNCHSKVRALRTAYDVLRKMQDKKLQAPDEVCYRVLLQLCGQYSQPVLAVRVLFE
MKKAGVQPNAITYGYYNKAVLESTWPSTTRGGYFLWGKLRNVILGVLQFKQAGKKQQTPH
KDPQLSDGSDLDTVSHGSLDSTNDSAERTSIDTDFTKMDSSDDGLSTDGQSDQGYDSLSK
EEERLCNRESDNSAPVEEKGLRQPNCGTRVASSPNETQLCPALPKTERPKSLDLFGGQGL
VMLTVPLVGSTKQHHITADRLYGVEEEDTETDKQKSVGERQRDRETGYDPLSQMGAAGTE
QQCDPGKGSSPPAEETEMFINNSNSPLNSRSPSMEMQSSSSPLFRSSSSAHTSPQSSTLT
CSNTHLSLPLKSKERLKPSPSLPMGMCNKDGERPSSLALPSSPSPSTLSFSMDSLLTPTL
DIVKSSVISAGKGVAEKASRLYSRLSSQTSLTQDGNSDRMSVSSLTSAEVECSSLLDSDA
CLDLHGFTSPQHGSMSRVRRSPAAAHQTNLSSPSSPTRVFRHNSFSGGLALHSKGPRTPD
SSPDVSRFQPCPNYTIEVMMSSCSLCKTCDCLVYDEEIMAGWTADDSNLNSTCPFCGTAF
LPFLNVEIKDLRPQNRPSKWSNPVKEEDTSAPLCPEAKLSEAAQPSVSPALERESSWSVR
NDAPALAQASSPDPVTVPYLSPLVLWKELESLLVNEGDQAISSPSVVDQHPIVFWNLVWY
FRRLELPSNLPALILASQHCSHGDQIPQTAASEDSKQVLVRIMWDNLKLHKDKVQPCYVL
WNTHCANSLIRSGLCEEGQLFTVELLQGFVRSIKKSDVYQPMSQTIQLLGPELGFKRQRS
LYRDLLFLTLVALGKNNININAFDREYRLAYDRLSPNQVKLTHNCDRPPGAGVMECRRTF
GEPSL
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggataaagggccccgtgtagccgactactttgtggttgctggcctcactgat
tcattcaagcccctggaggaggatctgcacttcgatgatgccggcaccaagtctgttaaa
cccaaagcccctattaccgacgttgctgtagtgatacgatccctcggcgaagaggtgccc
ttgggcttcacctgtgtggagagcaccccctccggcctttcagcagagcttaatggcgcc
agccttcggggcctgcagatcttcttgtgctacaagagaggcagagataagcctccactg
acagatctcggtgttctgtatgagtggaaagagaagctgaagcctggatgccacatcgtt
cagaccacaccctcagggcgccccgccaacatcagcagctcgtcttcccaacgcatctac
atcacgtaccggcgcgcgccgaagagccagcctcacacctccctggctgtcaccgatatc
tgcgtcattgtgcctggcaagggagagacgcctcctcacaccttctgcaaggtggacaag
aacctcaacagtagcatgtggggatcttcggtctacctttgctataagaagtctcttgct
aaagctaacacaatcgcatacaaagcaggtttgttgtgcaggtatcctgaagaggactat
gagtctttcccactgcctgagtccgtcccgatgttctgcctgcccatgggggcgatgatt
gagtgttggccagctcacaccaaacactctctgcccgttttctccacattcgtactgacg
ggtgcttctggagagaaggtgtacggagcagccatccagttctatgagccttacccagag
gagaacatttcggagcgtcagcgctcacaactcggcctgccgagctgtcatcttggacct
gacagcagcagaaatatttacaacaacaagagcatctgtttactctcacactggcccttc
ttccagtccttcaagagctttctcaccttcctctacagatattccatctctgggccacat
gcactgccaattgaaaagcacatatctcacttcatgaaaaatgttccatttccctccatc
cagaggccaagaatccttgtccagttgtcgccacatgacagcctaattctgagccaacca
gtgtcctctccactgcctcttagcggtgggagtctctcaacacttctgctgaatttgggg
cctaaaaatgcagtcactctgcttgtgctggccgtcactgagcacaagatcctggttcat
tccttacgtccagctgttctcaccagtgtcactgaggctcttgtgtctatgatatttcct
ttccactggccttgcccctacatccctctgtgtccgctggccctggcagatgttcttagc
gcaccctgcccttttatcgtgggtttggattctcgatactttgacctttatgtgcctccc
gctgatatcagctgtgttgatttggacaccaacaccatctcccaaaaagacgaaaagaag
gctctaacatggaaactcttgcccaggagagcctgtaaacatcttctgaacagcctgaat
aagctctatcagcagcttacagacggttgccagttaaaccgtgatgatgtgcagatggac
cacaccatgactgacagtgagctttacggaggaaagagcctccacactcttgagctggag
atccaagaagctttcctccgcttcatggcagccatccttcgaggctatcgctcctacctg
cagcccatcacccaagctccctctgagaaaaccacagatgtcacctccctgtttgacctc
caaggtttcctgaagagcagagaccgctcccatcagaggttttattccctcatgacgaag
actcagatgttcagtcgcttcattgaagagtgctcctttgtcagtgataaagatgccagc
ctggctttctttgatgagtgtgttgataagttattcacctctggtagcaagatggatagc
gagcggccagaggacaccaggctgatcgagctggatgaatcccaccgcagtgagcacacg
gtttatatcaacccaccagaactgcctcctctgcctcaaggagaagaacatcctctgtgc
tatagctactccgggttcccggttctgagatctgatcttttggagaccatggaaggacca
aattctaattcagcaggcattgctccacgccacagcaccccagccagtcccacggccatc
tttagacgttcaaaacaggagatcaaatccgctcagaagatggccaaaacacattcatct
atgcctcagatgtggtctaagtgtttgcttcggcattgctacggcttgtggtttatatgc
ctgccagggtttgtgggaaactgtcactccaaggtgcgagcattgcggaccgcttacgat
gtcttaagaaagatgcaggacaagaagctgcaggctcctgatgaggtgtgttaccgtgtg
ctgctgcagttgtgcggtcagtacagccagccagtgttggccgtcagggtgctgtttgag
atgaagaaggcaggagttcagcccaatgctataacttatggatactataacaaggcggtg
ttggagagcacctggccctccacaaccagaggaggatatttcttgtgggggaaactgagg
aatgtgatactcggtgtgcttcagttcaagcaggcaggaaaaaagcaacagactccacac
aaagacccccagctttcagatggcagtgatctcgacacagtcagccatggcagcttagac
agcactaatgactctgcggaacgcacgtccatcgatactgacttcactaaaatggactcc
agtgatgatggattgagtacagatgggcagtctgatcaaggctacgattccttgtcaaag
gaggaggagaggctgtgcaacagagaaagcgataactcggcaccagtggaggaaaaaggg
ttgaggcagcccaactgtggcaccagggttgcttccagccctaatgagactcagctttgc
ccagcgctgccaaagacagagaggcccaaatctttggacttgtttggtggacagggatta
gtgatgctcaccgtccccctagttggttcaaccaagcagcaccatattactgctgacaga
ttgtatggtgtggaagaagaggatacagagactgacaagcaaaaatcagtcggggagaga
cagcgagatagagaaacggggtatgatcccttgtcacagatgggggcagcagggacagaa
cagcagtgtgacccgggtaagggtagctcacctcctgccgaagagactgaaatgttcata
aataacagcaacagccctttgaacagccgctcacccagtatggaaatgcagagttcctct
agtccactgtttcgctccagctcgtcagctcacacatccccacagtcctccacgctcacc
tgctccaacacacacctctcactccccttgaaatccaaggagaggttgaagccttcgcca
tctcttcctatgggcatgtgtaacaaagacggggagagaccttcttccttggctttgcct
tcctcgccgagtccatccaccttgtcattctccatggactcactgttgactccgactttg
gatatcgtcaagagcagcgtcatatccgcaggaaagggtgtggcggagaaggccagtcgc
ctctactcccgtttgtcatcacagacatcattgacacaggatgggaacagtgatcgtatg
agcgtttcttctctgacctcagccgaggtagaatgctcctcgctgctggatagcgacgcc
tgcctggatcttcatggcttcacttcacctcagcatgggagcatgtcccgggtcaggagg
agccctgccgcagctcaccaaaccaacctgagcagccccagcagccccacaagagtgttc
agacataactccttctctggcggtttagctcttcattctaaaggcccacgcactccagat
tcttctcctgatgtcagccgcttccagccctgtcctaattacaccatagaggtgatgatg
tctagctgctcactttgtaaaacatgtgactgtctggtgtatgatgaagagatcatggcc
ggttggacagcagatgactcaaacctcaacagcacctgtcctttctgtggcactgccttc
ctgcctttcctcaatgtggaaatcaaagacctgagaccacagaataggccatctaagtgg
agtaatcctgttaaagaggaggacacgtctgcaccactctgccccgaagccaaattgtct
gaggcagctcagccatctgtgtctcctgctctggagcgggagagcagctggagtgttcgc
aatgatgccccagccttggcacaagcatcatctcctgatccggtgacagtgccgtacctg
agccccctggttctctggaaggagctggagagcctactggtgaacgagggagaccaggcc
atctcttccccgagcgtcgttgaccaacatcccatcgtcttctggaaccttgtgtggtac
ttcagaagactggagctgcccagtaacctgcctgctcttatcttggcttcccaacattgt
agccatggtgaccagattccccagactgctgcatctgaggacagcaagcaggtgctggtg
aggattatgtgggacaacctgaagttgcacaaagataaagttcaaccctgctatgtcctg
tggaacacacactgtgccaactctttgatccgctctggcttgtgtgaagaagggcagctc
ttcactgtggagctgctgcagggctttgtgaggagcatcaagaagagcgacgtttatcag
cccatgagccagaccatccagctgctggggcccgagttgggtttcaagagacagaggagc
ctctacagagatttactgtttctaactcttgtggctttggggaagaataacattaatatc
aatgcctttgatcgggagtacaggttggcttatgatcgcctctcccccaaccaagttaaa
ctgacacacaactgtgacaggcctccgggcgctggggtcatggagtgcaggaggacgttt
ggagagcccagtttgtga
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integrated database retrieval system
