Xiphophorus couchianus (Monterrey platyfish): 114161313
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Entry
114161313 CDS
T05908
Name
(RefSeq) unconventional myosin-Va-like isoform X1
KO
K10357
myosin V
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114161313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114161313
04131 Membrane trafficking [BR:
xco04131
]
114161313
03029 Mitochondrial biogenesis [BR:
xco03029
]
114161313
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114161313
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
114161313
mRNA cycle factors
P-body specific factors
114161313
Membrane trafficking [BR:
xco04131
]
Others
Actin-binding proteins
Myosins
114161313
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
114161313
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
114161313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
114161313
NCBI-ProteinID:
XP_027900326
LinkDB
All DBs
Position
2:11071736..11095987
Genome browser
AA seq
1821 aa
AA seq
DB search
MAAFELYSKNAHVWLPDAADVWKSAELLKDYTPGDLTLSLQLEDGTVVEHNVDPKTKNLP
PLRNPNILVGENDLTTLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQINQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSSEETNVEKRVLASNPIMEAFGNAKTTRNDNSSRFGKYIEIGFNKDHCIVGANMR
TYLLEKSRVVFQAHGERNYHIFYQLCASSHLSEFKAFKLGCADDFCCTNQGQGPVIDGVN
DAKEMCNTRRAFSLLGIGESDQVKIYQILSAILHLSNVDVKDQSSDTCSILPDNAHLMVF
CELMGVPCEEMAHWLCHRKLQTITETFVKPVSKENAVHGRDALAKHIYARLFGWIVNNIN
NALESTVKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFCDNKPCINLIEAKLGILDLLDEECRMPKGSDDTWAQKLYNTHLKQNAYFDK
PRLSNEAFIIHHFADKVEYQCVGFLEKNKDTVNEEQINVLKKSKFGLLPKLFEDEEKIKA
PTSKISSITGRPGKSQKEHKKTVGLQFRQSLYLLMDTLNATSPHYVRCIKPNDRKAPFTL
DPIRAVQQLRACGVLETIRISAAGFPSRWTYQEFFGRYRVLMKQKDVLPDRKQTCRNLLE
KLIKDQQKYQFGKNKIFFRAGQVAYLEKLRSDRLRSACVAIQKTIRCWLARKKYLRMRES
AIMIQKHVRAQQARSYVKFLRQTKAAIVIQRNVRMWSKKRRFLQQRSAAVTVQRVWRGYL
ARKHYFKLLHEQKAVVIQRMARGWLARQRFRRAMEAVVLLQSCVRRMSAKKELKKLKVEA
RSVEHFKNLNIGMENKIMQLQHKINEQHKENRELTERLSVLEKTHTTEREKQCREIENLR
SSEQEARAKAETVPSLLEQLSFLQEELENTRREKEHQEEQTKIYKEQTQQIIHELNMKNS
LLNSNLEELNEEFSIQAQQLAEIKTNLENTKQLEKDFTEERSRYQSLLSKHLQLEERHKD
LKEEMNVTIISNQSSHQRTDSNYSSNSSEFSQILSSTEDEDSAIQAEDEVETKVDLPILL
KLQKRVKELEGENRSLWKKLDKKEEAQQEKAKELEMQTTFGRTELDVEKLKRQELESENK
KLKQNLNELRKSLTSENSDLAPPAAGTLSYNILLEQLSSSNEELELRKEEVLLLRSHMVR
QEALKHKDSVLGESVKLDLGEIHSLQDSDRSTNIHTLNEDGELWLAYEGLKETNRLLETQ
MQEQECLHNEKYRKLNEEMNKLRTEKEHQQKLLAMSLLLPEDARIDASLKHEITRLTTEN
LERMEQQQKQDKTIRKLKKQLKLYMKKVEDLEANAHQTVSSSGTSMPVRPVHIARKEKEF
QGMLEFKEDDTGHLLKNLVVDLKPRGVAVSFTPGLPAFIIFMCLRYADNVNDDRRLSTLL
NSTISSIKGVIKRKGNDFEVVSFWLANTCRLMHCLKQYSGDEVFMVHNTAKQNEQCLANF
ELTEYHQLFGDLAIQIYRQIIKSMENILLPLIIPCMLEHEAEQGVLGSKPTGLRKRSPSF
PDEALTVEVLLQRLSFFHTTMSQHGMDSDIIKQVVKQQFYIISAVTLNNLLLRKDMCSWG
KGLQIRYNVWQLDEWLGEKELSDCGAKETLEPLIQAAQLLQINKNTEVDAKAICSMCSSL
TTAQIVKILTLYTPVIEFEERVSNTFITTIKNLLKDRAESSNLMMDAKKIFSVTFPFTPS
SVALETIQIPASLNLGFLTRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaactttactccaagaatgcccatgtttggctcccagatgcagcagat
gtgtggaagtctgctgagcttctcaaagactacactcctggtgacctgacgctgtctcta
caactggaggatggcacggttgtggagcacaatgttgaccccaaaaccaaaaacctgccc
cctctcagaaaccccaacatcctggtgggagaaaatgacctcacaactctcagttacctc
catgagccagcagtgctacacaaccttaaagtgcgctttattgactccaagctgatttac
acctactgtggaatcgtcctggttgccatcaatccctatgagagtctgcccatctatgaa
gctgatatcatcaacgcctatagtgggcaaaacatgggagacatggacccgcatatcttt
gcagtagctgaggaagcatacaaacaaatggccagagatcaaataaatcagtccataata
gtcagcggggagtctggtgcaggcaaaacggtttctgctaaatacgccatgcgttacttc
gccacagtcagcagctcatcggaggagaccaacgttgagaagagagttcttgcttctaat
ccaatcatggaggcctttgggaatgccaagacaacaagaaatgacaacagcagccgcttt
gggaagtacattgagatcgggtttaacaaggatcactgcatagtcggggctaacatgagg
acctacttactggaaaagtctagagtagtgtttcaggctcacggagaaagaaactaccat
attttttaccagctatgtgcctcttcacatctgtctgagtttaaggccttcaaattaggc
tgtgcagatgacttctgctgcactaaccagggtcagggtccagtcatcgatggagtcaat
gatgccaaagagatgtgcaacaccaggagggcattctcactattaggaattggtgaaagt
gatcaagtgaaaatttaccagattctttcagccattctccatcttagcaacgtggatgta
aaagatcagtcatctgacacatgcagcatcctgccagataatgcccacctgatggtcttc
tgtgagctcatgggagttccttgtgaagaaatggcccactggttatgccataggaaactc
cagacgatcacggaaacctttgtgaagcctgtttccaaagagaatgcggtccatggaagg
gatgcactggccaaacatatttatgccagactgttcggctggattgtgaacaacattaac
aatgcgctggaatctacagtgaaacaacactcatttatcggtgtgctcgacatttatggg
tttgagacatttgatgtcaacagctttgagcagttttgtatcaactatgccaatgaaaag
cttcagcagcagttcaacctgcatgtcttcaagctggagcaagaagagtacatgaaggag
gagattccctggacgttgatcgacttctgtgacaataagccatgcattaatctcatcgag
gccaagcttggcatcctggaccttctggacgaggagtgcagaatgcccaaaggttctgac
gacacatgggctcagaaactgtacaacacccacctgaagcagaatgcttattttgataaa
cccaggttatcaaacgaagctttcatcattcaccactttgctgacaaggtggagtaccag
tgcgtcggattcctggagaaaaataaggacactgtcaacgaggaacagattaatgtgctt
aaaaagagcaagtttggtttgctgccgaaactgtttgaggatgaagaaaaaataaaagcg
ccaactagcaagatttctagtatcactggaagacctgggaagtctcaaaaggaacataag
aaaactgtcggactgcagtttcgacagtctctatacttgcttatggacacactaaatgca
acatcgcctcattatgtgcgctgcatcaaaccgaatgaccgtaaagctccattcactctg
gacccaataagagccgtgcagcagcttcgagcatgtggcgtcctggaaacgatccgtatc
tctgcagcaggattcccatctagatggacctatcaggaattttttggtcgttatcgggtc
ctgatgaagcaaaaggatgttctgcctgatagaaaacaaacctgcagaaaccttctggaa
aaacttatcaaggaccaacagaagtaccagtttggcaaaaacaagatcttcttcagggct
ggccaggtggcttacctggagaagctgcgttcggacagactgcgttcagcttgtgtcgcc
atccagaagacaatccgatgctggctcgcccgcaaaaagtatctgaggatgagagagtcc
gccatcatgattcagaagcatgtacgggctcagcaggcacgcagttatgtcaagtttctg
cggcagaccaaagcagctattgttattcagcgcaatgtgcgaatgtggtctaaaaagaga
cgtttcctgcagcagcgctctgcagctgtcactgttcagcgtgtttggaggggctatttg
gctaggaagcattacttcaagttgctgcatgagcagaaggctgtggtgattcagaggatg
gcgagaggctggttggccaggcagcgtttccggcgcgcaatggaggccgtcgtcctgctg
cagagctgtgtgcgccgcatgagtgccaagaaagaattgaagaagctaaaagtggaggca
cgctcagtggagcacttcaagaacctcaacattgggatggagaacaagatcatgcagtta
cagcacaagataaacgagcaacacaaagaaaacagagagctcacagagaggctcagtgtt
ctggagaagacccacactactgagagggagaaacagtgcagagagatagaaaacctgcgc
tcttcagagcaggaggccagagccaaagcagagacggttccctcgctgctggagcagctg
tccttccttcaggaggagctggaaaacacccgcagagagaaggagcaccaggaggagcag
acaaagatctacaaagagcaaacgcaacagataatccatgaactgaacatgaagaacagc
ttgttaaatagcaacttggaagaactaaacgaggaattctccatacaagctcagcagttg
gcagaaattaaaaccaacttggagaacaccaaacagctggagaaggactttacagaagag
cgctctcgctaccaaagtctcctcagcaagcatctgcagctggaggaacggcacaaggac
ctcaaggaggagatgaacgtcaccataatttcaaaccagtctagtcaccagaggacagac
tccaactacagcagtaactcatctgagttttctcaaatcctgagctccactgaagatgaa
gacagcgccattcaagcagaggatgaggtcgagactaaagtggacctgcccattcttcta
aagcttcagaaaagggtgaaggagctggagggagaaaatcgatctttatggaaaaagctg
gataaaaaagaggaggcccagcaagaaaaggcaaaagaactggagatgcagacaactttt
ggcaggacagaactggacgtagaaaaattgaagcggcaagagctggagtctgaaaacaag
aaactgaagcagaatctgaatgagctgcggaagtctctgaccagcgagaatagcgatttg
gcgccccctgctgctggtactttgtcttataacattctgctggaacaactcagttcttcc
aacgaggagctggagctgcgtaaagaggaggtgttgctcctccgttcacatatggttcgt
caggaagctcttaaacacaaggattctgtacttggagaaagtgtgaaactggatctcggt
gaaatccactcattacaagattctgacaggtccactaatattcataccctgaatgaagat
ggagagctgtggcttgcttatgaaggcttgaaagagacaaataggcttctggagacccag
atgcaggagcaggagtgtcttcacaatgagaagtacaggaagctgaatgaggagatgaac
aaactgaggactgaaaaggagcatcaacaaaagctgctggctatgagcctgcttctaccc
gaagatgcccgaatagacgcaagcctgaagcatgagataacccgactcaccactgagaat
ctggaacgaatggagcaacaacagaaacaagataaaacaatacgcaaattgaaaaaacaa
cttaagctctatatgaaaaaagtggaagatttagaagcgaacgctcaccagacagttagc
tcttctgggacgagcatgcctgtccgaccggtgcacatcgcacgcaaggagaaggagttc
cagggcatgttggagttcaaggaggacgacacgggtcatttgctcaagaacctggtcgta
gatctgaagcctcgtggcgtcgcagtcagcttcactccagggcttcctgccttcatcatc
ttcatgtgccttcgatatgcagacaatgtgaacgacgacaggagactcagcactctcctc
aattctacaatcagcagcatcaaaggcgtcatcaagagaaaaggaaatgattttgaagtg
gtgtcgttctggctggccaacacgtgccggttaatgcactgtctgaagcagtacagtgga
gatgaggtgtttatggtgcacaacactgctaagcagaatgagcaatgcctggctaatttt
gagctgacagagtaccatcagctttttggtgacctggccattcaaatctaccgtcagatc
atcaaaagcatggagaacatcctgctacccctgataataccttgcatgctggagcatgag
gcagagcagggagttttaggctccaaaccaacaggcctgaggaagaggagccccagcttc
cctgatgaagctttgacagtggaagtcctcctgcaacgtctcagcttcttccacaccacc
atgagtcaacacgggatggactctgacatcatcaaacaggtggtcaaacagcagttttac
atcatcagcgccgttactcttaacaatctgctgctgaggaaagacatgtgctcgtggggt
aaaggcctacagatcaggtacaacgtttggcagctggatgagtggctgggagagaaggag
ctgagcgactgtggagcaaaggaaactctggagcctcttattcaggctgcacagctttta
cagatcaataaaaacactgaagttgatgccaaagcaatctgtagcatgtgctcgtccctc
accacagcacagattgttaaaatcctgacgttgtatactccagtgattgagtttgaagaa
agagtatcaaacacattcatcaccaccattaaaaaccttttgaaagacagagctgagtcg
tccaacttgatgatggacgccaagaaaatattctccgtcacattcccgttcacgccttcc
tctgtggctctggagaccatccagatccctgcaagcctcaacctgggcttccttacacgt
gtctag
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