Xiphophorus couchianus (Monterrey platyfish): 114161370
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Entry
114161370 CDS
T05908
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114161370 (npas1)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114161370 (npas1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
114161370
NCBI-ProteinID:
XP_027900413
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All DBs
Position
18:complement(21919994..21976900)
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AA seq
797 aa
AA seq
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MASMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRTFASQGDPPWSPLLEGDNNCNKVRRSSHSLA
TDMFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRAEAGCHIAPDSASSTASTSSLAGPSSPHSAADDPPERGFFIRMKS
TLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGFTRSVYRPMGLVALAHTLPPSTLNEVRM
ESNMFVFRVNMDLQVTYCENRISEYMDLTPAEVVGHTCYHFVHVEDLENIRQSHEDLLRK
GQVVTGYYRWLQRRGGYLWIQSTATVSINHKAPHERNVIWVNYVLSRTEMPDTPLDLLQL
PESIRAERLRVSSSPTDGSPQARGQPPGKTVGKSDPDSKGREKFAAPAVQSEERRKRLLR
SDHEGAPPESRRRLEELRHTEEVVSASSDLESEGDEEEEPEWEQGGDSDRLKQEDSGGGG
KQGRGGDATTGGDRAGRVHNGRAVIQQLKSVVAPSTLPQSPTIKTEHEVLSTGGRWGSHT
HASQPQPTHAHTPSSSLNGDSPTTPIPDSSSSSEAPPKGLFTPPSPALSPAMSVSSPQPR
EDRVVSGIVSRGAAGGGTGNGPDFELLQRLAGGAAGRVLFHPLALGPQGPQSLYAPSTIR
YAPPELPPSHHHGGGHGDSLQLRSDHHKGPPPTFFPHLQRLAGLPPFSGFSPSDSPFSSS
LPFCMNGLRGAAGTEED
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcatgccgtttgtcagcgaggggaaatgtgtgagtgtggagtgggatttcctt
caaggacttctcgccaaacctcctacactaccctgtctccagaacctgcgtaaagagaaa
tctcgcaatgcagctcgttctcgacgggggaaggagaactttgagttctttgagctggct
aagatgctgcctttgccaggggccatcacgagtcagctcgacaaagcgtcagtcattcgg
ctgactatcagctatctacacatgcgcacctttgcaagtcaaggagacccaccatggagc
cctctgctggagggagacaacaactgcaacaaagttagacgatcatcccattctctggcc
actgatatgtttgagcagcaccttggggctcacctcctgcagtctctggatggctttgtg
tttgtggtcagtcaggagggacgcttcctctacatctcagagacagtttccatctacctg
gggctctcacaggtggagctgaccggcagcagcgtgttcgactacatccacccagcggac
cacgtggagatggccgagcggctggggatcaaaccgcatctgcgggccgaagccggctgc
cacattgcccccgacagcgcctccagcaccgcctccacctcttcactagccggtccctcc
agtcctcattctgctgctgacgatcctccagaacgtggctttttcatccgaatgaagtcc
acactcaccaaaagaggcctacatgtcaaatcctccggatacaaggtcatccatgtgacc
ggtcggatccgctgccgccccgcgctcgtcccgggtttcacgcgctcagtctatcgcccg
atgggcttggtggctctcgcacacacgctcccgccctccacgctcaacgaggtccgcatg
gagagcaacatgtttgtcttccgagtgaacatggacttgcaggtcacatattgtgaaaac
aggatctcagagtatatggatctgaccccagcggaagtggtgggacatacctgttatcat
ttcgtccatgtggaggatctggaaaatatccggcagagccacgaggacctgctgaggaaa
ggccaggtggtgacgggctactaccgctggcttcagaggagaggaggttacctgtggatc
cagtccactgccactgtctccatcaatcacaaagccccccatgagcgcaatgtcatctgg
gtgaactacgtcctgagtcgaactgagatgcccgacactcccttggatctgctgcagcta
ccggagagcataagagccgagagacttcgagtcagctcgtcccccaccgacggctccccg
caggcccgaggtcaaccaccggggaagacagtcggaaagagtgaccctgacagcaaaggt
agagaaaaatttgctgcccccgccgtccaatcagaggagagaaggaagcgcctgctaagg
tccgaccacgagggagcgcctcctgagagccggcgtcgcctggaggaacttcgacacacg
gaggaagtggtgtcagcctcctcagacctcgaaagtgaaggcgatgaggaggaagagccg
gagtgggagcaggggggcgacagcgacagactgaagcaggaagacagcgggggagggggc
aaacagggcagaggaggggacgccacaacgggaggggacagagcgggccgggtgcacaac
ggccgggccgtcatccagcagctgaaaagcgtggtggcaccgtccaccctgccgcaaagt
cccaccatcaagactgaacacgaagtcctgtccaccggagggcgctgggggtcccacacg
cacgcctcacagccccagccgacgcacgcgcacacaccgtccagcagcctaaacggcgac
agccccaccaccccaatcccagattcctcgtccagcagcgaggcgccgccgaagggcctg
ttcacccctccgtctcctgccctatctcctgccatgtccgtgtcctccccacagccccgc
gaggacagggtcgtctccgggatagtgagccgtggcgccgcgggcggcggcaccggaaac
ggccccgacttcgagctgctccaaagactagcgggtggcgcggccggacgggtcctcttc
caccccctcgccctcggtcctcagggccctcagagcctctacgctcccagcaccatccgc
tacgctccgccggagctgccgccctcccaccaccacggtgggggccatggcgacagcctg
cagctacgctcggaccaccacaagggacccccgccgaccttcttcccgcacttgcagcgg
ctggccgggctgccacccttcagcggtttctcaccgtctgacagccctttctcctccagc
ctgcctttctgtatgaacggactgaggggggccgcgggcacggaggaggactga
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