Xiphophorus couchianus (Monterrey platyfish): 114161446
Help
Entry
114161446 CDS
T05908
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114161446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xco04091
]
114161446
Lectins [BR:
xco04091
]
C-Type lectins
Lecticans
114161446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Calx-beta
Big_9
DUF6522
TM_ErbB1
Protocadherin
TMEM154
Motif
Other DBs
NCBI-GeneID:
114161446
NCBI-ProteinID:
XP_027900514
LinkDB
All DBs
Position
18:complement(7618101..7678841)
Genome browser
AA seq
3114 aa
AA seq
DB search
MAWIIPSHLHGTGAALLLLALILTGDAVASVFDSYGLSYALRPELSEDTILVANNGIRVP
FGRSVFIDPINDLVVQVQPGDRCSITVLDNDPLSQRPGHLSPKKFPCEFGPNDVKYSHFG
SRSPPRDRVRLQLRYDTQTDTIIIPFMMEVEVIFTQLEVLTKNMPLTVDKLLGTSNPIDT
GILEFTFDRRSQQCKIASLTSGNVMPRYGKLVDEESLGTMVDCDEFIRMNLRYQHTFTSK
SPNRDYIPMLVELYDKEGNVLKQEFFQILVRIKDGEDNTPPKPSFVAMMMMEVDQFVMTA
VTVDMLAAEDVESNPDELIFNITSPLSFEEGYIVSTDDRNLPITSFYQGDLKELKIAYKP
PAVDSDIERIFQVELEVVDTEGAVSDTFEFMIVVKPMNTLAPVVTRNTGQLLYEGQSRPL
SSSQNLEISDEDNLDKVRISVIDGLRHGELTVVGSRRTFFTPADLDAGVVIYQHDGSDTY
SDNIIFRMTDGTNEVEFLFPITVVPTDDEAPIINANTGLILFKNQVMQIFPSMLSAADID
SEDSTIKFALELPFPTVGQVLLRQSEAPKDPSTWKFNTEDEMYEKVVTEWLQQDIIDGKL
FYKHKGPHSTSTVMDQFVFRVQDDNDPPNKSGKSTFIIKIIPVDDLPPELYPSTTLQMTV
HEYQLTYFRKKFLRYTDLDSEDRDLKYTIIQPPTDTDENSPVLLGALVLTETPNTEVTTF
TQAQINHHKIAYKPPDLELGITTHVLQFRYTVEDVSRNSVEGVFTIFLKPVDNKPPEITN
TGFTVLERGRHILTRAELDTTDTDTDSSKITFTITQLPLHGQIQFIFTPMTKGDTFNLEN
IGNGMISYINNGDESTVDLIRIDVSDGVHVVPISIKITVKPIDDETPTIDLPAGTIGSYI
DVLENEATEITSNVIQGRDEDTDDLRLTFIVEDKPSFGEILVKGVPSSTFTQADIINGFV
VYAHTSGEIGLNTKEDFFNLTLTDMSDEWTIGGNKITGVRVHVTILPLDSQAPEVFVGPQ
FTVTEGEKNVIQILHISADDVDTPNDDLLCTIIVQPTSGYVENISPAPGSEKSRSGTAIS
AFTIKDIRQNHIYYVQSIHKGVEPVEDRFTFRCSDGINFSERHFFPISVIPSNDEKPEIY
MREFVVMEGMNIVIDTPILNGADADLPSDQLTFFIAKPPRHGFILNQLTTGTLPVSNFTL
EQIRDGSSIVYEHDDTETTEDSFEIVLTDGKFSVEKTVIVMVIPVDDETPRMAINDGLEI
EIGDVKVINNNVLKATDLDSEDSTLTYIIRYGPGQGYLQRTMPTGELQNISVGMNFSQNE
VDQGLILYIHNGQEGIRDLIKFDVTDGINPLIDRYFYVTIGGIDIVFPDVINKGVSLKEG
GRVTLTTDLLSTSDLNSPDEHLVFTITRAPVRGHLECTDTPGMPISSFTQLQLAGSKIYY
IHTADDEVKMDSFEFEVTDGYNPVFRTFRISITDVDNKKPVVTVHGLVVIEGENKLITPF
EITVEDRDTVDRLLRFTVTQIPVHGRLLFNNSQPVTSFTKQDLNENMISYKHDGTESAED
SFSFTVTDGTHTDFYVFPDTVFETQKPQVMKITVLAVDNGVPHIIVNKGAQTLRVMERDL
LGFVITSKSLKAEDRDSNQDSVTFRITVAPLHGYLINLGRGNATVSTFTQAEIDDMNICY
ILKHGDNATNDVFHFSIGDNGGNKLRNQQFRLNWAWISLEKEHYVVDEEVKFLEVVLKRR
GYLGETSFVSIGTKDNTAVKDKDFRGKAQKQVQFNPGQTTATWKVRILSDSEYEVSETFQ
IVLSDPVMAALEFPEVATVEILDPDDESTVFIPSAVYNIEEDIGELLIPVLRSGDVNQEL
MVICYTQQVSATGTVPTTVLSYSDYISRPEDHHSILRFDKGEIEKSCRIVIIDDSLYEDE
ESFNVTLSMPMGGRLSSEFPTARVIIIPDMDDDPVFYFGSMEYHVDESDAFVEVQVWRTG
SDLSKGGTVTVRSRRTDPVSAEAGVDYVGISRNLDFAPGVTMQTFRVTILDDFGQPVLEG
PEKFELVLRMPMNGILGEPSKTSIIINDSISDLPKVQFRHAVHVGSESSGQISATVYRSG
DISYKSTVRCYSRQGTAQVMMDFNERPNTDASIITFLPGETEKPCLLVLVDDTEHEEEEE
LRLVLGSPKSESPFGASIGKQNETLIKIKDDADRSVISFEETKFSVSEPKKKGQVSVVKI
SVLRIGDTSKVSVVRVHTKDGSATSGEDYHPISEEIVFRQGDTEHHVEVEVLYDGVREMR
EAFTVHLKPDENMVAETKMSKAIIYIEESNSMADVTFPSIPIVISLFNYDDNEQNKPSLP
VAGYPVICVTACNPKYPDYHKTGSICVSESINNTLTRYRWLVSAPTGPDGVTSPMREVDF
DTFFTSSKLITLDSVYFQAGSRVQCAARAVNSNGDEGLEQTSSIVSISTDEGMCQPRAVG
TVGAEPFSARLRYSGAEETDHPNLIKLTVTMPHIDGMLPVVSTRPLSNFELTLSPDGTRV
GHHRCSNLLDYTEVKTNYGFLTEATKNPEIIGQTAPYQYSTSLRGSSTLRFYRNLNLEAC
LWEFTSYYDMSELLSDCGGTIGTDGQVLNLIQSFVTLRVPLHVSYVFHSPVGAGGWQHFD
LQSELRLTFVYDTAILWRDGIGSPPEAELQGALYPTSMRINGLGQLVVNFRTEARFRGLF
VLAHLASPLTSMVMCAEYPGLTFNLSLVRSEPTYSQPIQQWTFISDFAVRDYSGLYTVKL
IPCTSPPSLEYTLPPVCSPREPLNFDLDIRFQQVSDPVAAEFSLNTQMILLSKRTLWLSD
GSMGFGQESDTAFSQGDTIYGRVMVDPVQNLGNSFICNIEKVFLCTGADGYVPKYNPGNF
EFGCLADAPSLLYRFKIIDKAQPETQAHSFGNVAFNAFLAVDDPGALVLVRQSGADGFRM
DSAALFQVAAGREWYIHTIYTVRSRDNANRGIGKRSLEYHVISQHSDRLPTGHHRTRRSS
SNEPDVVDEIGVENNRGTNILHISLDLSSQQKTSPEKEIFTKGIIPHELNQRDSDDRLVL
IIGIFVGLLLTVLLIIVVVLLVRSKQEKKEVPRNSTSTEPMITQNLSNSDSSEV
NT seq
9345 nt
NT seq
+upstream
nt +downstream
nt
atggcttggattattccttcgcatctgcacgggactggcgctgctttgcttctcctcgca
ctgattctgacaggtgatgccgtagcaagtgtttttgacagctatggattatcatacgcc
ctgaggcccgagctctcggaagatacgatactggttgccaataatgggatccgcgtgcct
ttcgggagatccgttttcattgatcccattaacgatttggtggtccaagttcagcccggc
gacagatgcagcatcacagttttggataacgacccgctgtctcaaagaccaggacacctg
tctccgaaaaagtttccgtgtgaatttggccccaacgacgtgaagtattcacactttggc
tcccggagtcccccgagagacagagtgagattacagctcaggtacgacacccaaacggat
acaataataataccgttcatgatggaggtggaggtgatcttcacacagctggaagtgctg
acgaaaaacatgccccttactgttgacaaactgctgggcaccagtaatcccatcgataca
gggattttggagttcacctttgacagacgctcacagcaatgcaaaatagcttcgctcacc
agcgggaacgtgatgccccgatatgggaaacttgtggatgaggagagcctcggaacaatg
gtagattgtgatgaattcattaggatgaacttacgttatcagcatacttttacttcaaag
tccccgaacagagattacatccccatgctggtagaattatatgataaagaaggaaatgtg
cttaagcaggaatttttccagattttggtgcgaattaaagacggagaggacaacacgccc
cctaagcccagctttgttgccatgatgatgatggaagtcgaccagtttgtaatgacagca
gtaaccgtagacatgctggctgctgaggatgtggagtctaatcccgacgaattaattttc
aacatcacttcccctctctcctttgaagagggctacatagtcagcacagatgacaggaat
ttacccataacctcattttaccagggagacctcaaagaattgaaaattgcttataaacct
cctgctgtggattcagacattgagaggattttccaggttgagcttgaagttgtggacaca
gaaggggctgtgtcagacacgtttgaattcatgattgttgttaagccgatgaacacgttg
gcccctgtggttacaaggaacactggtcagctactgtatgaaggccagtccaggccgttg
tctagttcacagaatctagaaatcagtgatgaggacaatttagacaaagtaagaattagt
gtaattgatggcttgaggcatggagagttaactgttgtgggctccaggagaacatttttc
accccggctgaccttgacgctggagtagtcatttatcagcatgatggtagtgatacatac
agtgataacattatcttcaggatgacggatggcacaaatgaagtggagtttttgtttccc
atcactgttgtgcctacagacgatgaggcacctattatcaatgccaacactggtttgatt
ttgttcaaaaatcaagttatgcagattttcccgtcaatgctcagtgctgcagatattgac
tcagaagattctacaataaagtttgcattagagcttccctttccaacagtggggcaggtg
ttgctgcgtcagtctgaggcaccaaaggacccatctacctggaagtttaatacagaggat
gagatgtatgagaaagtagtgactgagtggctgcagcaggacattatcgatggaaaactg
ttttacaagcacaaagggcctcacagcacgagcacagtcatggatcaatttgtgtttaga
gtacaagatgacaatgatcccccaaataagtcaggtaagagcacattcataatcaaaata
attcctgttgatgacctcccgcctgaactttaccctagtacaaccttacaaatgactgtt
cacgagtaccagctgacgtacttccggaaaaaattcctccgctacactgaccttgattca
gaggatcgagatttaaaatacaccattatccaaccgcctacagacacagatgagaacagc
cctgttttactaggagccctggttttgactgaaaccccaaacactgaagtcacaacgttc
acacaggcacagattaaccatcacaaaatagcctacaaaccacctgatcttgagcttgga
attaccactcatgttctacagttcagatacactgtggaagatgtctctagaaatagtgtg
gagggagtttttacaatattcttaaagcctgtggacaacaagccacctgaaataacaaac
accgggtttactgtgctggaacgtggcagacatatcctcaccagagccgagttggacacc
acagacacagacacagacagcagcaagataacattcactattacacagcttcctcttcat
ggtcagatccagttcatattcactcccatgacaaaaggggataccttcaaccttgagaat
attggaaatggaatgatctcatacatcaacaatggagatgaatcaacagtagacttgata
agaatagacgtcagtgatggggtgcatgttgttccaatttctataaaaattacagtgaag
ccaattgatgatgagactccaacaattgatctgccagcgggtacaataggctcctacata
gatgtactagaaaatgaagcaacagaaatcacaagtaatgtaattcagggaagagatgag
gatacagatgacctccgtttgaccttcatcgttgaagacaaaccatcatttggtgaaatc
ctagtgaaaggagtcccatcgagcacgtttactcaagctgatatcattaacggctttgtg
gtttatgcccatacaagcggagagattggcttaaacacaaaggaggactttttcaatctc
actctgactgatatgtctgatgaatggactataggaggaaataaaattacaggtgtcaga
gttcatgtaactattctgcccctggacagtcaggctcctgaggtctttgttgggccacag
tttactgttactgagggagaaaaaaatgtcattcagattcttcatataagcgcggatgat
gtcgacacccctaatgatgaccttctttgtacaattattgttcaacccacttcagggtat
gtggaaaacatctctccagcaccaggttcagagaaatccaggtctgggacagctattagt
gctttcaccatcaaagacattagacagaatcacatttactatgttcaaagcattcacaaa
ggagttgagccagtggaggacaggtttaccttcagatgctctgatggtatcaatttttct
gaaaggcacttttttcccatctccgtaatcccctctaatgatgaaaagccagagatttac
atgagagaatttgtggttatggagggcatgaacatagttattgacactcccatactgaac
ggtgctgatgcagacctcccgtctgaccagctcacttttttcatcgccaaaccccccaga
catggatttattcttaatcagctcaccactggaactctccctgtgtcaaacttcaccttg
gaacagatcagggatggctctagtattgtgtatgagcatgatgacacagagacaacagaa
gatagctttgaaattgttctcacagatggaaaattcagtgtagagaaaacagtaatagtt
atggttatccctgtggatgatgaaaccccaaggatggctattaatgatggcctagaaatt
gagataggtgatgttaaagtaattaacaataatgttttaaaagccactgatctggactct
gaggatagtacacttacatatattataagatacgggcctggccaggggtatttgcaaaga
acaatgccaactggtgaattgcaaaatatctcagttggaatgaatttttcacaaaatgaa
gtagatcagggattgattttgtacatccacaatggacaagagggaatccgtgacctcatt
aagtttgatgtgacagatggaatcaaccctttaattgacagatacttctatgtaacaatt
ggtgggattgacatagttttccctgacgtaatcaataaaggagtatcccttaaagaggga
ggccgagttaccttgacaactgatcttcttagtacaagtgacctgaacagtccagatgag
cacttggttttcacaatcacccgtgctcctgtgagaggacacctggaatgcacagacaca
cctgggatgccaatctcatcctttactcagctccagctggctggtagcaaaatctactac
attcacacggctgacgacgaggtgaaaatggatagctttgagtttgaagtgactgatggc
tacaaccccgtgttccgcacttttcgcatctccatcactgacgtggacaacaagaagcct
gtggttacggtacacggcctggtggtgatcgagggagagaataaactcatcacacctttt
gaaataacagttgaagacagagacactgttgaccgcctgttgagattcacagttactcaa
atccctgttcacggtcgcctgctcttcaacaacagtcaacctgtcacctctttcacaaag
caagacctaaatgagaacatgatcagctacaaacatgatggcacagagagcgcagaggac
agtttctccttcaccgtcaccgatggaacccacacagacttttatgtcttccccgacacg
gttttcgagacccaaaaaccccaagtgatgaagattactgttcttgctgtggataatggg
gtgcctcacatcatagttaacaaaggtgcccagacattgagggtgatggagagagatctc
ttggggtttgtgatcacaagtaagtccctcaaagcagaggacagagacagcaatcaggat
tctgtgacttttaggattactgttgccccactacacggttacctgatcaaccttggcaga
ggaaatgcaactgtctccacgttcacacaagctgaaatcgatgatatgaacatatgctac
attctgaagcatggtgacaatgcaacaaatgacgtttttcatttctccattggggataat
ggaggcaacaagcttagaaaccagcagttcaggctaaattgggcttggatttccttggaa
aaggaacactatgtggtggatgaggaggtcaagttcctagaggtggtgctgaaacgtcgt
ggttacctgggagagacttcgtttgttagcatcggcacaaaggataatactgcagtgaag
gacaaagacttccgtgggaaggctcagaaacaggtgcagttcaacccaggccagaccaca
gccacctggaaagtcagaatcctgtcagacagcgagtatgaggtgtcagaaaccttccaa
attgttctgtccgacccggtgatggctgctctcgaattcccagaggttgctacagtggag
atcctggacccagatgatgaatcaacagtgttcataccctcagccgtatacaacatagag
gaggacattggtgagctgctcatccctgtactcagaagtggggatgtgaatcaagagctt
atggttatttgctacactcagcaagtttctgccacaggcactgtccccaccactgtgctg
tcctactctgattacatctctaggcctgaggaccatcacagcatcctgcgctttgacaag
ggagagatagagaaatcctgtcggatagtgataattgatgattccctgtacgaagatgag
gaaagcttcaatgtcaccctcagcatgcccatgggaggacgcctcagctcagagttcccc
acagccagagtcataatcattccagatatggatgatgatccggttttctactttggaagc
atggaataccacgtggatgagagtgacgcctttgtggaggtgcaggtgtggaggacaggg
tctgatctttccaaaggaggaactgtgacagtgcgctccagaaggaccgatccggtctca
gctgaggctggcgtggattatgtggggatcagccggaatctggattttgctccgggcgtc
accatgcaaacatttcgcgtgaccatcctggatgattttggtcagccggtcctggaaggt
ccagaaaagtttgagctggtgctgcgaatgccgatgaacggaatcctcggcgagccgagc
aaaacgtccatcatcatcaatgactccatctctgacttgcccaaagtgcagttccggcat
gctgtgcatgtggggagtgaaagctcaggacaaatctcagctacggtgtaccgcagtggc
gacatcagctacaagtcaacagtccgatgttacagcaggcaggggacagcccaggtgatg
atggactttaatgaaaggccaaacacagatgcatccatcattaccttcctaccaggagag
actgaaaaaccttgtttacttgtgctggttgatgacacggaacacgaggaggaggaagag
cttcgtctcgtcttggggagtcccaagagcgaatctccgtttggagcatctattggaaag
caaaatgaaactctcattaaaattaaagatgatgcagacagatctgttattagttttgaa
gaaaccaaattcagtgtgagcgaaccaaagaaaaaaggtcaagtctcggtggtaaagatc
tcagtgttgcgtatcggagacacctctaaggtctctgttgttcgagtgcacaccaaagac
ggatctgctacctcaggggaggactaccatccaatatctgaggaaattgtgttcagacag
ggagacacagagcatcatgtggaggtggaggttttatatgatggtgtcagagaaatgagg
gaggccttcacagtccatcttaagcctgacgagaacatggtggcagaaacaaagatgagc
aaagccatcatctatattgaagagagcaacagcatggcagatgtgacgtttccctccatt
cccatcgtgatttctctgtttaattatgatgacaacgaacaaaacaaaccctccctgcct
gtggctggataccctgtcatttgtgtcactgcctgtaaccccaagtatccagactaccac
aaaacagggtcaatctgtgtgagcgagagcatcaacaacacgttaactcgctatcgctgg
cttgttagcgcccccaccggcccagatggtgtcactagcccaatgagggaggtagacttt
gacactttcttcacttcctccaaactcataactctggactcagtctatttccaggctggc
tccagggtccaatgcgctgccagggctgtgaactctaacggggatgaaggactagaacaa
actagctccatagtgtcaatcagcacagatgagggaatgtgtcagcctcgtgctgtaggc
acggttggggctgagccattttctgccaggctgcggtacagcggagcagaggaaacagac
catccaaacctcatcaaattaaccgtcaccatgcctcacattgatggaatgttgccggtt
gtatccacccgacccctttctaattttgagctgacgctgagccccgatgggacgcgtgtc
ggccaccatcgctgctccaatttgttggactacactgaggtcaagaccaactacggcttt
ttaaccgaagccaccaagaatccagagattattggacagacagcgccttaccaatacagc
acttctctgaggggatccagcactctacggttctacagaaacctcaacttggaggcttgt
ttgtgggaattcaccagctactatgacatgtccgagcttctcagtgactgtggaggcacc
atcgggactgatggacaggtgctgaatctcatccaatcctttgtgaccctccgagtccca
ctgcatgtgtcctacgtcttccattctcctgtgggagcaggaggctggcagcactttgac
ttgcagtcagagctaaggctcacgtttgtgtacgacactgccatcttgtggcgggatggc
attgggagtccaccagaggctgaactgcaaggtgccctctacccaactagcatgcgtata
aacggcctggggcaactagtagttaacttccgcactgaggctcgattcagaggcctgttt
gtgcttgcacatctagcttcacctctgacctcaatggtcatgtgtgcagaataccctggt
ttaacgttcaacctcagccttgttaggagtgagccaacctacagtcagcccattcaacag
tggacattcatctctgattttgctgtgcgtgactactctggtttgtacacagtaaagctg
atcccctgtacttcccctccaagcttagagtacacccttcctcctgtctgcagtcctaga
gagcccctcaactttgatttggatatccgctttcagcaggttagcgatccagtggctgct
gaattcagcttaaacacgcagatgatcctgttgtccaaacggacactctggctgtcagat
ggctccatgggcttcggacaggagagtgatacggctttctcacagggggatacaatttat
gggagagtgatggtggatccagttcagaacttgggcaactcctttatttgcaacatagag
aaagtgttcctgtgcactggtgctgatggctacgtcccaaaatacaacccaggcaacttt
gagtttggttgcctggctgatgctccgtccctgctgtacaggttcaagattattgacaag
gcccagccagagacccaggcccattcctttggcaatgttgcctttaatgctttcctggca
gtggatgaccctggtgctttggttctggtcagacagtctggggcagatggtttcagaatg
gattctgcagctctctttcaggtggctgcggggagagagtggtacattcatacaatctac
acagtccgttcccgggacaatgcgaatcgggggatagggaagagaagcttggaatatcac
gtgatcagccagcactcggatcgtctgcctacgggtcaccatcgcaccagaaggtcttcc
agcaatgagcctgacgtagttgatgagattggcgtggaaaacaaccgtggtaccaacatc
ttgcacatctcactggaccttagcagccagcagaagacgagtccagagaaggagatcttc
accaaaggaatcatcccccatgaactcaaccagagagacagtgatgatagacttgtgtta
atcattgggatctttgttggattgctcctcactgtgcttctcattattgtagtggtctta
ctggtgcggtctaagcaggagaagaaagaagtacccaggaactccaccagtacagaaccc
atgattactcaaaacctcagcaacagtgacagttctgaggtctaa
DBGET
integrated database retrieval system
