Xiphophorus couchianus (Monterrey platyfish): 114161453
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Entry
114161453 CDS
T05908
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114161453 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114161453 (dhx36)
03012 Translation factors [BR:
xco03012
]
114161453 (dhx36)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114161453 (dhx36)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114161453 (dhx36)
Translation factors [BR:
xco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114161453 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
HA2_N
nSTAND3
ATPase
NPHP3_N
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
114161453
NCBI-ProteinID:
XP_027900538
LinkDB
All DBs
Position
18:complement(24202335..24238552)
Genome browser
AA seq
1064 aa
AA seq
DB search
MSYGYGGGGGRRSRKGDRGFRDGSRERLDRGGGGGGGGRGFRGHGSDFDQDRGAGGGQRD
RPPPHLRGRDIGLWYARYGAVRRKQADRRSRAMVHMDEAREEHITKLLNSVQRDPTRDSR
DAPSSVSDAWQTAASSSGHCYFDGDMPEEKQKLEEEEDGSSKQKKTSRTSQRDSSTAAKD
EPPDNWDADDEDDVEKEKTLSEHKDLEFLFQEVVRDASVDEDLKRDLQSKKTDRNYKEML
KFREKLPSYGKKEDLVRLINSNRVLVVSGETGCGKTTQVTQFILDDHIRRGRGSTCRVVC
TQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQWLRS
DPLLSSVSHLVLDEIHERNLQSDVLLVIVKELLNLRDDLKVILMSATLNAEKFSKYFDKC
PMIHIPGLAFPVEEFLLEDIIEMTRYRPQNQDRRPAWKRRFWQGHQSRSEKEEKEEEYKE
SWPCYARTLQGRYSDGTIEAVEMLDTDEKIDLELILALIRHIVLNEGEGAILVFLPGWDN
ISSLNDLLTAQQMFRSDRFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETSITI
DDVVYVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNGLRA
SLLEAYQLPEIMRTPLEELCLQIKILKLGSISRFLEKALDPPSEKAVNLAIKSLTDLNAL
DHAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKM
ADMRRRTLSRNSKSDHLTIVYAFKGWEEAKQRGSRYERDYCWDNFLSANTLQMLHNMKGQ
FAEHLMSAGFVSSRDPKDAKSNINSDNEKLIKAVIVAGLYPKVAMIRPSYSKKRPGVKVY
TQTDGKVCIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDITIQ
KDEGQETVAVDRWIVFRSPARIAHLVKSLKRELDSLLQDKISNPAPVDWENRQSKDCAVI
TAIIDLITTQERPAGGSKDDGRTWASAPSGRHSYFDDDDDDDDD
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggctacggcggtggaggtggaagaagaagcagaaagggagacagagggttc
agggatgggagcagagagagactggacagaggaggaggaggtggtggcggtgggagaggt
ttcagaggacacggttccgacttcgaccaggaccgaggagcaggaggaggtcagagggac
cgacctcctccacacctgaggggccgggacattggtttgtggtacgcgcggtatggagca
gtgaggaggaaacaagcggaccgcagatcgcgggccatggtccacatggacgaagccaga
gaggaacacatcaccaagctcctcaactctgtccagagagacccaacaagagacagcagg
gacgcaccgtcctcagtgtctgacgcctggcagacagcagccagcagcagcggccactgt
tactttgacggggatatgcctgaagagaagcagaaattggaggaagaggaagacggttct
tcgaaacagaagaaaacaagccgcacatctcaacgtgactcctctacagcagctaaagat
gaacctccagacaactgggacgcagatgatgaggatgacgtggagaaagaaaaaacactg
agcgaacacaaggatctggagttcttatttcaggaagtagtcagagacgcatcagtggat
gaggacttgaaaagagatttgcaaagcaaaaaaacggatcgaaattacaaagaaatgttg
aaattcagggaaaaactaccatcatacggaaagaaagaggatctggtgcggctcatcaac
tctaaccgcgtcttggtggttagcggggagacggggtgcggaaagaccactcaggtcacc
cagttcatcctggacgaccacatcagaagaggccggggctcgacgtgccgcgtggtctgc
acgcagccccgccgcatcagcgccatctccgtagcagagcgtgtagctgcagaaagagca
gaaagtgtaggaaatggaaattcctgtggttaccaaatacgtctgcagagccggttacca
cggagacaaggttcaatactgtactgtacaacaggaattattcttcagtggctccgctct
gatccgttgttatccagtgtcagtcaccttgtgctggacgagatccacgaaagaaacctt
cagtcagatgttttgctcgtcatcgtgaaggaattactcaacctccgagatgatctcaag
gtcatcctgatgagtgccaccctcaacgcagaaaagttctctaaatattttgacaaatgt
ccaatgatccacatccctgggttagcattcccagtggaagagttcctacttgaagacatc
attgagatgaccagatatcgtccgcagaatcaggatcgtcggcctgcatggaagagacgc
ttttggcagggccaccaatccagatcggagaaggaggagaaggaggaggaatataaggag
agctggccatgttacgcacgaacgctgcagggcagatactctgacggcacaatcgaggcg
gtggagatgttagacactgatgagaagattgatctggagctgatcctggcgctgatccgg
cacattgtgctcaacgagggggagggagcaatcttggttttcctgcccggctgggacaac
attagcagtctcaatgacctcctcacggcgcagcaaatgttccgatcagataggtttgtc
atcatccctctgcactccctcatgcccactgttaatcagacgcaggttttcaaaagaccc
ccgccaggagtcagaaagattgtgattgcaaccaatatcgcggagaccagcatcaccata
gatgatgtcgtttatgtgatagatggaggaaagattaaggagaccaacttcgacaccgac
aacaacatcagcaccatgacggccgagtgggttagcttggccaacgccaaacagaggaaa
ggacgtgctggcagggtgcaaccaggaaagtgctatcatctgtacaatgggcttagggcc
agcctgctggaagcctatcaattacctgaaattatgaggacaccgctggaggagctctgc
ttgcagataaagattctgaagctcggctccattagtcgatttctggagaaggccttggac
ccgccgagcgagaaggcagttaacctcgccatcaagagcctcacagacctgaacgctctg
gaccacgcagagaatctgacagcgctgggtttccacctggcacgtctccccgtggagccg
cacatcggcaagctgatcctgttcggcgctctgttgggatgcctcgaccccgtactcacc
atcgccgcttcgctcagcttcaaagaccctttcttcatacccctgggtaaagagaagatg
gcagatatgaggagaaggactctgtccagaaactcaaagagtgaccacctcactattgtt
tacgccttcaagggatgggaggaagccaagcagcgggggtccaggtatgagagggattac
tgctgggacaacttcctgtctgccaacacactccagatgctgcacaacatgaaaggtcag
tttgccgaacatctcatgagtgctggctttgtcagcagccgggatcccaaagacgctaaa
tccaatatcaactcggataatgagaagttgatcaaggcagtgattgttgccggactgtac
cctaaggtggccatgatccgaccctcttacagcaaaaagagacctggggtaaaggtgtac
acccagaccgacggaaaggtgtgtatccatcccaaatctgtcaatgctgaagagagggaa
ttcaactacacatggctcatttaccacttgaagatgagaaccagcagcatcttcctgtac
gactgcaccgaggtgtccccgttctcgctgctgttcttcgggggagacatcaccatccag
aaagacgagggccaggagaccgtcgcggtcgaccgctggatcgtcttcaggtccccggcg
cgcatcgctcatctcgtaaagagtttgaagagagagctggactcactgttgcaagacaaa
atcagtaacccggctcctgtggattgggagaaccgccaatccaaggactgcgctgtcatc
acggccatcatagacctcatcactacgcaggaaaggcctgcaggcggcagcaaggacgac
ggcaggacgtgggcgtctgcccccagcggaaggcactcttacttcgatgatgacgatgac
gacgacgatgattaa
DBGET
integrated database retrieval system
