Xiphophorus couchianus (Monterrey platyfish): 114161497
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Entry
114161497 CDS
T05908
Symbol
alcam
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
114161497 (alcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114161497 (alcam)
04090 CD molecules [BR:
xco04090
]
114161497 (alcam)
Cell adhesion molecules [BR:
xco04515
]
Immunoglobulin superfamily
Other
114161497 (alcam)
CD molecules [BR:
xco04090
]
Proteins
114161497 (alcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
C2-set_2
V-set
Ig_PDGFR_d4
C1-set
Syndecan
Protocadherin
DUF6377
DUF6773
FAM176
TMEM70
Pectate_lyase_5
Ig_4
Motif
Other DBs
NCBI-GeneID:
114161497
NCBI-ProteinID:
XP_027900598
LinkDB
All DBs
Position
18:complement(24949396..25022591)
Genome browser
AA seq
560 aa
AA seq
DB search
MMHLLSLLFSALLCQVSSLEKSVTGLYGETVEIPCTVGANKIENVTLTKWKYENVDLLVK
SKGKETVILATDEYKDRISLAANLSLLLTGAKLTDQHTFTCQALITTNIGLDIKDFSHAL
IVHKAPEAPFITEKAAELEIGKLTKLGKCVAKNANPPAKIVWLRNNKTLTPEENRTVINA
GNTSSPLDAESTLLYSARKEDTGAQFSCRAEHSLASGLLSPPQTFVINYSTEKLILEVIS
NSLPVEGNDVTLKCVADGNPRPTSFNFHIKGNVTKVENSDNYTITNISRNDSGEYKCSLI
NRPSIEAAKNIVVQYLDVKLNLNKTVIRRAGDFLNLSVGIDSSATPTVSWTKGGVKMNKE
PKITKLAYSDAGLYELEVTMGPLSRKASFHLTVEGAPVIRKLDDQNDKDGHRKVLICEAE
GSPKPAVSWNINGTLIDEKSFDNGTIKHKISVMPSANLSVACTVSNLFGIDTRVITVSSL
FEDVKVDKRDSSDDDDKTKLVVGVVIGLLVAALVIGVAYWMYMKKSKQGSWKTGEKENGS
SEEEKKLEEKMEENSQKADV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacttgttgtccctcctcttctccgcgctcctgtgccaagtgtcgtcgctggaa
aaaagcgtcaccggcctgtatggggaaacggtggagattccttgcaccgtcggagccaac
aaaatcgaaaacgtcacgttgacgaaatggaaatatgaaaatgtagaccttttggtcaaa
tctaagggcaaggaaactgtaatcttagccaccgatgagtacaaggaccgcatcagcctg
gcggcaaatctcagcctcctgcttactggagccaaactgaccgaccagcacaccttcacc
tgccaggcgttgattaccacaaacattggcctagatattaaagatttttcacatgctcta
atcgtccacaaggcgcccgaagctccttttataactgagaaggcagcagaactggagatt
ggcaaactcacaaagcttggaaaatgcgttgcaaaaaatgctaatccacctgcaaagatc
gtatggctgaggaacaacaaaacccttacgcctgaagaaaaccggactgtgattaatgcg
ggaaatacctccagccccttagacgccgaatccacgctgctgtattctgcgcggaaagaa
gacacaggcgcccagttcagctgcagggcggagcactcgctggccagtggcctcttgtcc
cccccacagaccttcgtcatcaactactccacagagaagctcatcctggaggtcatctca
aattctctacccgtggagggaaacgacgtgactctgaagtgtgtggcggatggaaaccct
cgtcccaccagctttaactttcacatcaagggaaatgtgacgaaagtggaaaattcagac
aattacaccatcacaaacatctcacgcaacgacagcggagaatacaaatgctctctaatt
aaccgcccctcgatagaagcggccaagaacatcgtagtccagtacctagacgtcaaatta
aacctaaataagacggtcatcagacgcgcaggcgactttttgaatctaagtgtcggcatt
gattcctccgcaacaccaacagtctcatggacaaagggaggtgttaagatgaacaaagag
cccaagatcaccaagcttgcctactcagatgccggtttgtatgagttggaggtgacgatg
ggccccctcagcagaaaggcttcttttcatctgactgtcgaaggtgctccggttatcaga
aaactggacgatcagaacgacaaagacggccaccgtaaagtcttaatttgtgaggccgaa
ggttccccaaagccagctgtttcctggaacatcaacggcactttgattgatgagaaatcc
ttcgacaatggcacaataaaacataagatctcagtgatgccctctgcaaacctgagtgta
gcttgtacagtgtccaatttgtttggcattgacaccagagtcataactgtgtcttctcta
tttgaggatgtgaaagtggataaacgagattcttcagacgatgatgacaaaaccaaactg
gttgtcggagttgtaattgggctcctggtcgcagcgttggttataggcgtggcctactgg
atgtacatgaagaaatccaagcaaggaagctggaaaactggtgagaaggagaatgggtct
tctgaggaggagaagaagttggaggagaagatggaggagaacagccagaaagctgacgtg
tag
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